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Sed0022475 (gene) of Chayote v1 genome

Gene IDSed0022475
OrganismSechium edule (Chayote v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG03:41090578..41091251
RNA-Seq ExpressionSed0022475
SyntenySed0022475
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG70631.1 hypothetical protein EZV62_005566 [Acer yangbiense]1.1e-1934.38Show/hide
Query:  DEIVERWQKLDLTEKESVGIDLNENCCALSKGNFHLNVAAKILSNQMVNVEAFRGVMK----TIRCFFIRKLKSNT-----QNLNDKDGVLSNGPWNFDK
        +E+ +  + L L EKE   + L E      +    L +A K+LS++ VN +AF  VM     TI  F I  +  NT     +N  D+  +L+ GPW+FDK
Subjt:  DEIVERWQKLDLTEKESVGIDLNENCCALSKGNFHLNVAAKILSNQMVNVEAFRGVMK----TIRCFFIRKLKSNT-----QNLNDKDGVLSNGPWNFDK

Query:  TLVVLSSPKESESIGGMKFKYCPFLIQIHNVSVQNPTIEAVKRLGNTNGHVKEIDWDGVNEWVGPVLRIRISINIQEPIQRGLFLKNVKAGE
         L+VL  PK       M F    F +QIH V +   T E  + +GN  G VKEID  G  ++VG  +R+R+ I+I +P++  L +  ++ G+
Subjt:  TLVVLSSPKESESIGGMKFKYCPFLIQIHNVSVQNPTIEAVKRLGNTNGHVKEIDWDGVNEWVGPVLRIRISINIQEPIQRGLFLKNVKAGE

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]1.4e-2535.11Show/hide
Query:  MDEIVERWQKLDLTEKESVGIDLNENCCALSKGNFHLNVAAKILSNQMVNVEAFRGVMKTI----RCFFIRKLKSNT-----QNLNDKDGVLSNGPWNFD
        MDEI + W+    T  E+  + ++     L+  N  L V AK+ +++ ++ EA R VMK++           L  N      ++L++K  VLS+GPW F+
Subjt:  MDEIVERWQKLDLTEKESVGIDLNENCCALSKGNFHLNVAAKILSNQMVNVEAFRGVMKTI----RCFFIRKLKSNT-----QNLNDKDGVLSNGPWNFD

Query:  KTLVVLSSPKESESIGGMKFKYCPFLIQIHNVSVQNPTIEAVKRLGNTNGHVKEIDWDGVNEWVGPVLRIRISINIQEPIQRGLFLKN
        K+L+VL+SP  +     M F +C F IQIHN+  +  + E    LG   G V+EI+ DG + W GP +R+R+ I++ +P++RG+ LKN
Subjt:  KTLVVLSSPKESESIGGMKFKYCPFLIQIHNVSVQNPTIEAVKRLGNTNGHVKEIDWDGVNEWVGPVLRIRISINIQEPIQRGLFLKN

XP_022155933.1 uncharacterized protein LOC111022932 [Momordica charantia]2.1e-2133.15Show/hide
Query:  MDEIVERWQKLDLTEKESVGIDLNENCCALSKGNFHLNVAAKILSNQMVNVEAFRGVMKTI----RCFFIRKLKSNT-----QNLNDKDGVLSNGPWNFD
        MDEI E W+   LT+++   I ++     ++  N       K+ +++ ++VEAFR VMK++        I     N      +++ +K+ VL++GPW+F+
Subjt:  MDEIVERWQKLDLTEKESVGIDLNENCCALSKGNFHLNVAAKILSNQMVNVEAFRGVMKTI----RCFFIRKLKSNT-----QNLNDKDGVLSNGPWNFD

Query:  KTLVVLSSPKESESIGGMKFKYCPFLIQIHNVSVQNPTIEAVKRLGNTNGHVKEIDWDGVNEWVGPVLRIRISINIQEPIQRGL
         +L+VL+SP  ++    M F +    IQIH +  Q    +  K LG   G V+EID +G  EW GP +R+R+ I+I +P +RGL
Subjt:  KTLVVLSSPKESESIGGMKFKYCPFLIQIHNVSVQNPTIEAVKRLGNTNGHVKEIDWDGVNEWVGPVLRIRISINIQEPIQRGL

XP_023888198.1 uncharacterized protein LOC112000324 [Quercus suber]1.1e-1932.86Show/hide
Query:  MDEIVERWQKLDLTEKESVGIDLNENCCALSKGNFHLNVAAKILSNQMVNVEAFRGVMKT----IRCFFIRKLKSNT-----QNLNDKDGVLSNGPWNFD
        MD++  +W +L L  +E+  I L     A    N +  + AK+ + + VN+EA    +KT    I+ F +  L SN       N  D   +LS GPW+FD
Subjt:  MDEIVERWQKLDLTEKESVGIDLNENCCALSKGNFHLNVAAKILSNQMVNVEAFRGVMKT----IRCFFIRKLKSNT-----QNLNDKDGVLSNGPWNFD

Query:  KTLVVLSSPKESESIGGMKFKYCPFLIQIHNVSVQNPTIEAVKRLGNTNGHVKEIDWDGVNEWVGPVLRIRISINIQEPIQRGLFLKNVKAGEFGALCIM
        K L+ L  P ESES+   KF    F +QIHN+ +        + +G++ G V+++D     E  G  +RIR+++NI++P+ RG F   V  G  G L + 
Subjt:  KTLVVLSSPKESESIGGMKFKYCPFLIQIHNVSVQNPTIEAVKRLGNTNGHVKEIDWDGVNEWVGPVLRIRISINIQEPIQRGLFLKNVKAGEFGALCIM

Query:  RNFRIFALPV
         +F+   +PV
Subjt:  RNFRIFALPV

XP_023926510.1 uncharacterized protein LOC112037926 [Quercus suber]6.1e-2133.81Show/hide
Query:  MDEIVERWQKLDLTEKESVGIDLNENCCALSKGNFHLNVAAKILSNQMVNVEAFRGVMKT----IRCFFIRKLKSNT-----QNLNDKDGVLSNGPWNFD
        MD++  +W +L L  +E+  I L     A    N +  + AK+ + + VN+EA    +KT    I+ F +R L SNT      N  D   +LS GPW+FD
Subjt:  MDEIVERWQKLDLTEKESVGIDLNENCCALSKGNFHLNVAAKILSNQMVNVEAFRGVMKT----IRCFFIRKLKSNT-----QNLNDKDGVLSNGPWNFD

Query:  KTLVVLSSPKESESIGGMKFKYCPFLIQIHNVSVQNPTIEAVKRLGNTNGHVKEIDWDGVNEWVGPVLRIRISINIQEPIQRGLFLKNVKAGEFGALCIM
        K L+ L  P ESES+   KF    F +QIHN+ +        + +G++ G V+++D     E  G  +RIR+++NI++P+ RG F   V  G  G L + 
Subjt:  KTLVVLSSPKESESIGGMKFKYCPFLIQIHNVSVQNPTIEAVKRLGNTNGHVKEIDWDGVNEWVGPVLRIRISINIQEPIQRGLFLKNVKAGEFGALCIM

Query:  RNFRIFALPV
         +F+   +PV
Subjt:  RNFRIFALPV

TrEMBL top hitse value%identityAlignment
A0A5C7GYE2 DUF4283 domain-containing protein1.6e-1933.33Show/hide
Query:  DEIVERWQKLDLTEKESVGIDLNENCCALSKGNFHLNVAAKILSNQMVNVEA---FRGVMKTIRCFFIRKLKSNT-----QNLNDKDGVLSNGPWNFDKT
        +E+V   + L L EKE   + L +N     +    L +  K+LS  MVN EA   F  + +T+ C  +  +  N      +N  D+  VL+ GPW+FDK 
Subjt:  DEIVERWQKLDLTEKESVGIDLNENCCALSKGNFHLNVAAKILSNQMVNVEA---FRGVMKTIRCFFIRKLKSNT-----QNLNDKDGVLSNGPWNFDKT

Query:  LVVLSSPKESESIGGMKFKYCPFLIQIHNVSVQNPTIEAVKRLGNTNGHVKEIDWDGVNEWVGPVLRIRISINIQEPIQRGLFLKNVKAGEFGALCIM
        L+VL +P     I GM+F    F IQIHN+ +   T E  + L    G VKEID     + VG  +R+R+ IN+  P++R L +  ++ G+   + +M
Subjt:  LVVLSSPKESESIGGMKFKYCPFLIQIHNVSVQNPTIEAVKRLGNTNGHVKEIDWDGVNEWVGPVLRIRISINIQEPIQRGLFLKNVKAGEFGALCIM

A0A5C7IMZ7 DUF4283 domain-containing protein5.5e-2034.38Show/hide
Query:  DEIVERWQKLDLTEKESVGIDLNENCCALSKGNFHLNVAAKILSNQMVNVEAFRGVMK----TIRCFFIRKLKSNT-----QNLNDKDGVLSNGPWNFDK
        +E+ +  + L L EKE   + L E      +    L +A K+LS++ VN +AF  VM     TI  F I  +  NT     +N  D+  +L+ GPW+FDK
Subjt:  DEIVERWQKLDLTEKESVGIDLNENCCALSKGNFHLNVAAKILSNQMVNVEAFRGVMK----TIRCFFIRKLKSNT-----QNLNDKDGVLSNGPWNFDK

Query:  TLVVLSSPKESESIGGMKFKYCPFLIQIHNVSVQNPTIEAVKRLGNTNGHVKEIDWDGVNEWVGPVLRIRISINIQEPIQRGLFLKNVKAGE
         L+VL  PK       M F    F +QIH V +   T E  + +GN  G VKEID  G  ++VG  +R+R+ I+I +P++  L +  ++ G+
Subjt:  TLVVLSSPKESESIGGMKFKYCPFLIQIHNVSVQNPTIEAVKRLGNTNGHVKEIDWDGVNEWVGPVLRIRISINIQEPIQRGLFLKNVKAGE

A0A5C7IND8 CCHC-type domain-containing protein1.4e-1833.85Show/hide
Query:  DEIVERWQKLDLTEKESVGIDLNENCCALSKGNFHLNVAAKILSNQMVNVEAFRGVMK----TIRCFFIRKLKSNT-----QNLNDKDGVLSNGPWNFDK
        +E+ +  + L L EKE   + L E      +    L +A K+LS++ VN +AF  +M     TI  F I  +  NT     +N  D+  +L+  PW+FDK
Subjt:  DEIVERWQKLDLTEKESVGIDLNENCCALSKGNFHLNVAAKILSNQMVNVEAFRGVMK----TIRCFFIRKLKSNT-----QNLNDKDGVLSNGPWNFDK

Query:  TLVVLSSPKESESIGGMKFKYCPFLIQIHNVSVQNPTIEAVKRLGNTNGHVKEIDWDGVNEWVGPVLRIRISINIQEPIQRGLFLKNVKAGE
         L+VL  PK    I  M F    F +QIH V +   T E  + LGN  G VKEID  G  + VG  + +R+ I+I +P++  L +  ++ G+
Subjt:  TLVVLSSPKESESIGGMKFKYCPFLIQIHNVSVQNPTIEAVKRLGNTNGHVKEIDWDGVNEWVGPVLRIRISINIQEPIQRGLFLKNVKAGE

A0A6J1D765 uncharacterized protein LOC1110179026.8e-2635.11Show/hide
Query:  MDEIVERWQKLDLTEKESVGIDLNENCCALSKGNFHLNVAAKILSNQMVNVEAFRGVMKTI----RCFFIRKLKSNT-----QNLNDKDGVLSNGPWNFD
        MDEI + W+    T  E+  + ++     L+  N  L V AK+ +++ ++ EA R VMK++           L  N      ++L++K  VLS+GPW F+
Subjt:  MDEIVERWQKLDLTEKESVGIDLNENCCALSKGNFHLNVAAKILSNQMVNVEAFRGVMKTI----RCFFIRKLKSNT-----QNLNDKDGVLSNGPWNFD

Query:  KTLVVLSSPKESESIGGMKFKYCPFLIQIHNVSVQNPTIEAVKRLGNTNGHVKEIDWDGVNEWVGPVLRIRISINIQEPIQRGLFLKN
        K+L+VL+SP  +     M F +C F IQIHN+  +  + E    LG   G V+EI+ DG + W GP +R+R+ I++ +P++RG+ LKN
Subjt:  KTLVVLSSPKESESIGGMKFKYCPFLIQIHNVSVQNPTIEAVKRLGNTNGHVKEIDWDGVNEWVGPVLRIRISINIQEPIQRGLFLKN

A0A6J1DP89 uncharacterized protein LOC1110229321.0e-2133.15Show/hide
Query:  MDEIVERWQKLDLTEKESVGIDLNENCCALSKGNFHLNVAAKILSNQMVNVEAFRGVMKTI----RCFFIRKLKSNT-----QNLNDKDGVLSNGPWNFD
        MDEI E W+   LT+++   I ++     ++  N       K+ +++ ++VEAFR VMK++        I     N      +++ +K+ VL++GPW+F+
Subjt:  MDEIVERWQKLDLTEKESVGIDLNENCCALSKGNFHLNVAAKILSNQMVNVEAFRGVMKTI----RCFFIRKLKSNT-----QNLNDKDGVLSNGPWNFD

Query:  KTLVVLSSPKESESIGGMKFKYCPFLIQIHNVSVQNPTIEAVKRLGNTNGHVKEIDWDGVNEWVGPVLRIRISINIQEPIQRGL
         +L+VL+SP  ++    M F +    IQIH +  Q    +  K LG   G V+EID +G  EW GP +R+R+ I+I +P +RGL
Subjt:  KTLVVLSSPKESESIGGMKFKYCPFLIQIHNVSVQNPTIEAVKRLGNTNGHVKEIDWDGVNEWVGPVLRIRISINIQEPIQRGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAAATAGTAGAAAGATGGCAGAAATTGGATTTAACAGAGAAAGAATCGGTAGGAATTGATCTTAATGAAAATTGTTGTGCTCTTTCAAAAGGAAATTTTCATCT
CAACGTTGCGGCTAAGATTCTATCTAATCAGATGGTTAATGTAGAGGCTTTTAGAGGAGTAATGAAAACAATCCGGTGTTTTTTTATCAGGAAACTAAAATCGAATACGC
AGAATTTGAATGACAAAGACGGGGTTTTAAGTAATGGTCCGTGGAACTTTGATAAAACACTTGTTGTTCTATCCTCTCCTAAAGAAAGTGAAAGTATAGGAGGTATGAAA
TTCAAATATTGCCCCTTCTTGATTCAAATTCACAATGTCTCAGTGCAAAACCCTACTATTGAAGCGGTTAAACGCTTGGGGAATACTAATGGGCATGTTAAAGAAATTGA
TTGGGATGGAGTAAATGAATGGGTTGGCCCTGTTCTTCGTATAAGAATTAGCATTAATATTCAAGAACCAATTCAGAGAGGTTTATTTTTGAAAAATGTGAAGGCAGGAG
AATTTGGTGCCCTTTGTATTATGAGAAACTTCCGGATCTTTGCTTTGCCTGTGGTGTTTTTGGATATTCCTCATGAGCGTATAATTTTGCTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGAAATAGTAGAAAGATGGCAGAAATTGGATTTAACAGAGAAAGAATCGGTAGGAATTGATCTTAATGAAAATTGTTGTGCTCTTTCAAAAGGAAATTTTCATCT
CAACGTTGCGGCTAAGATTCTATCTAATCAGATGGTTAATGTAGAGGCTTTTAGAGGAGTAATGAAAACAATCCGGTGTTTTTTTATCAGGAAACTAAAATCGAATACGC
AGAATTTGAATGACAAAGACGGGGTTTTAAGTAATGGTCCGTGGAACTTTGATAAAACACTTGTTGTTCTATCCTCTCCTAAAGAAAGTGAAAGTATAGGAGGTATGAAA
TTCAAATATTGCCCCTTCTTGATTCAAATTCACAATGTCTCAGTGCAAAACCCTACTATTGAAGCGGTTAAACGCTTGGGGAATACTAATGGGCATGTTAAAGAAATTGA
TTGGGATGGAGTAAATGAATGGGTTGGCCCTGTTCTTCGTATAAGAATTAGCATTAATATTCAAGAACCAATTCAGAGAGGTTTATTTTTGAAAAATGTGAAGGCAGGAG
AATTTGGTGCCCTTTGTATTATGAGAAACTTCCGGATCTTTGCTTTGCCTGTGGTGTTTTTGGATATTCCTCATGAGCGTATAATTTTGCTGTGA
Protein sequenceShow/hide protein sequence
MDEIVERWQKLDLTEKESVGIDLNENCCALSKGNFHLNVAAKILSNQMVNVEAFRGVMKTIRCFFIRKLKSNTQNLNDKDGVLSNGPWNFDKTLVVLSSPKESESIGGMK
FKYCPFLIQIHNVSVQNPTIEAVKRLGNTNGHVKEIDWDGVNEWVGPVLRIRISINIQEPIQRGLFLKNVKAGEFGALCIMRNFRIFALPVVFLDIPHERIILL