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Sed0022517 (gene) of Chayote v1 genome

Gene IDSed0022517
OrganismSechium edule (Chayote v1)
DescriptionAuxin-responsive family protein
Genome locationLG05:36468256..36468720
RNA-Seq ExpressionSed0022517
SyntenySed0022517
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024703.1 hypothetical protein SDJN02_13521, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-2652.26Show/hide
Query:  MKKIISLLRKCKSLSRQLGRSSSYRSLRSKSTKEDLWICERKMEEQE-----EDFGDHHQQ--LEKVSGNNVIIYVG-----------------------
        M K+ SLLRKCKSLSRQLGRSSSY SLRSKST+EDLW+CER MEE E     E+ G+H ++   E+VSG+NVIIYVG                       
Subjt:  MKKIISLLRKCKSLSRQLGRSSSYRSLRSKSTKEDLWICERKMEEQE-----EDFGDHHQQ--LEKVSGNNVIIYVG-----------------------

Query:  -----------------------IVLFDHLLWMLENSDPNISFYSNFEELAELYV
                               +VLFDHLLWMLENSDPNI F SN EELAELYV
Subjt:  -----------------------IVLFDHLLWMLENSDPNISFYSNFEELAELYV

XP_011653970.1 auxin-responsive protein SAUR78 [Cucumis sativus]4.6e-2552.56Show/hide
Query:  MKKIISLLRKCKSLSRQLGRSSSYRSLRSKSTKEDLWICERKMEEQEEDFGDHHQQLE-KVSGNNVIIYVG-----------------------------
        MKKI SLLRKCKSLSRQLGRSSSY SLRSKST+EDLW+CE+    QEEDF    QQ+E KVSG+NVI+YVG                             
Subjt:  MKKIISLLRKCKSLSRQLGRSSSYRSLRSKSTKEDLWICERKMEEQEEDFGDHHQQLE-KVSGNNVIIYVG-----------------------------

Query:  ------------------------IVLFDHLLWMLENSDPNISFYSNFEELAELYV
                                +VLFDHLLWMLENSDPNI+F SN EELAELYV
Subjt:  ------------------------IVLFDHLLWMLENSDPNISFYSNFEELAELYV

XP_022135446.1 uncharacterized protein LOC111007398 [Momordica charantia]9.9e-2856.76Show/hide
Query:  MKKIISLLRKCKSLSRQLGRSSSYRSLRSKSTKEDLW-ICERKMEEQEEDFGDH-HQQLEKVSGNNVIIYVG----------------------------
        MKKI SLLRKCKSLSRQLGRSSSY SLRSKST+EDLW IC  KMEE+EE+  DH  QQLEKV G+NVI+YVG                            
Subjt:  MKKIISLLRKCKSLSRQLGRSSSYRSLRSKSTKEDLW-ICERKMEEQEEDFGDH-HQQLEKVSGNNVIIYVG----------------------------

Query:  ----------------IVLFDHLLWMLENSDPNISFYSNFEELAELYV
                        +VLFDHLLWMLENSDPNI+F SN EELA+LYV
Subjt:  ----------------IVLFDHLLWMLENSDPNISFYSNFEELAELYV

XP_023536060.1 auxin-responsive protein SAUR71 [Cucurbita pepo subsp. pepo]1.1e-2652.98Show/hide
Query:  MKKIISLLRKCKSLSRQLGRSSSYRSLRSKSTKEDLWICERKMEEQEE----DFGDHHQQLEKVSGNNVIIYVG--------------------------
        M K+ SLLRKCKSLSRQLGRSSSY SLRSKST+EDLW+C+R MEE EE    +  + H+  EKVSG+NVIIYVG                          
Subjt:  MKKIISLLRKCKSLSRQLGRSSSYRSLRSKSTKEDLWICERKMEEQEE----DFGDHHQQLEKVSGNNVIIYVG--------------------------

Query:  -------------------IVLFDHLLWMLENSDPNISFYSNFEELAELYV
                           +VLFDHLLWMLENSDPNI F SN EELAELYV
Subjt:  -------------------IVLFDHLLWMLENSDPNISFYSNFEELAELYV

XP_038899559.1 auxin-responsive protein SAUR78 [Benincasa hispida]2.0e-2856.38Show/hide
Query:  MKKIISLLRKCKSLSRQLGRSSSYRSLRSKSTKEDLWICERKMEEQEEDFGDHHQQLEKVSGNNVIIYVG------------------------------
        MKKI  LLRKCKSLSRQLGRSSSY SLRSKST+EDLW+C  KME  EEDF    QQLEKVSGN+VI+YVG                              
Subjt:  MKKIISLLRKCKSLSRQLGRSSSYRSLRSKSTKEDLWICERKMEEQEEDFGDHHQQLEKVSGNNVIIYVG------------------------------

Query:  -----------------IVLFDHLLWMLENSDPNISFYSNFEELAELYV
                         +VLFDHLLWMLENSDPNISF SN EELAELYV
Subjt:  -----------------IVLFDHLLWMLENSDPNISFYSNFEELAELYV

TrEMBL top hitse value%identityAlignment
A0A0A0L464 Uncharacterized protein6.5e-3380.58Show/hide
Query:  MKKIISLLRKCKSLSRQLGRSSSYRSLRSKSTKEDLWICERKMEEQEEDFGDHHQQLE-KVSGNNVIIYVGIVLFDHLLWMLENSDPNISFYSNFEELAE
        MKKI SLLRKCKSLSRQLGRSSSY SLRSKST+EDLW+CE+    QEEDF    QQ+E KVSG+NVI+YVGIVLFDHLLWMLENSDPNI+F SN EELAE
Subjt:  MKKIISLLRKCKSLSRQLGRSSSYRSLRSKSTKEDLWICERKMEEQEEDFGDHHQQLE-KVSGNNVIIYVGIVLFDHLLWMLENSDPNISFYSNFEELAE

Query:  LYV
        LYV
Subjt:  LYV

A0A1S3B9J9 uncharacterized protein LOC1034876595.5e-2450.63Show/hide
Query:  MKKIISLLRKCKSLSRQLGRSSSYRSLRSKSTKEDLWICERKMEEQEEDFGDHHQQLEKVSG-NNVIIYVG-----------------------------
        MKKI SLLRKCKSLSRQLGRSSSY SLRSKST+EDLW+CE+    QEEDF     Q  KVSG NNV++YVG                             
Subjt:  MKKIISLLRKCKSLSRQLGRSSSYRSLRSKSTKEDLWICERKMEEQEEDFGDHHQQLEKVSG-NNVIIYVG-----------------------------

Query:  --------------------------IVLFDHLLWMLENSDPNISFYSNFEELAELYV
                                  +VLFDHLLWMLENSDPNI+F SN EELAELYV
Subjt:  --------------------------IVLFDHLLWMLENSDPNISFYSNFEELAELYV

A0A6J1C0S4 uncharacterized protein LOC1110073984.8e-2856.76Show/hide
Query:  MKKIISLLRKCKSLSRQLGRSSSYRSLRSKSTKEDLW-ICERKMEEQEEDFGDH-HQQLEKVSGNNVIIYVG----------------------------
        MKKI SLLRKCKSLSRQLGRSSSY SLRSKST+EDLW IC  KMEE+EE+  DH  QQLEKV G+NVI+YVG                            
Subjt:  MKKIISLLRKCKSLSRQLGRSSSYRSLRSKSTKEDLW-ICERKMEEQEEDFGDH-HQQLEKVSGNNVIIYVG----------------------------

Query:  ----------------IVLFDHLLWMLENSDPNISFYSNFEELAELYV
                        +VLFDHLLWMLENSDPNI+F SN EELA+LYV
Subjt:  ----------------IVLFDHLLWMLENSDPNISFYSNFEELAELYV

B9RI47 Uncharacterized protein2.5e-1648Show/hide
Query:  MKKIISLLRKCKSLSRQLGRSSSYRSLRSKSTKEDLWICERKMEEQEED----------------FGDHH------QQLEKVSGNNV-IIYVGIVLFDHL
        MKKI  +LRKCKSLSRQLGRSSSY SLRSKST+E+LW   ++ +E+ +                 +  H       Q+ ++  G  + ++   +VLFDHL
Subjt:  MKKIISLLRKCKSLSRQLGRSSSYRSLRSKSTKEDLWICERKMEEQEED----------------FGDHH------QQLEKVSGNNV-IIYVGIVLFDHL

Query:  LWMLENSDPNISFYSNFEELAELYV
        LWMLEN+DPN+SF  + EELAELYV
Subjt:  LWMLENSDPNISFYSNFEELAELYV

C6T0R1 Uncharacterized protein3.2e-1650Show/hide
Query:  MKKIISLLRKCKSLSRQLGRSSSYRSLRSKSTKEDLWICERKMEEQE-----------------EDFGDH---------HQQLEKVSGNNVIIYVG--IV
        MKKI  LLRKCKSLSRQLGRSSSY SLRSKSTKED+W     M+E E                 + + +H          +Q++K S  + ++ V   +V
Subjt:  MKKIISLLRKCKSLSRQLGRSSSYRSLRSKSTKEDLWICERKMEEQE-----------------EDFGDH---------HQQLEKVSGNNVIIYVG--IV

Query:  LFDHLLWMLENSDPNISFYSNFEELAELYV
        LFDHLLWMLEN+DP  S  S  EELAELYV
Subjt:  LFDHLLWMLENSDPNISFYSNFEELAELYV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G12955.1 SAUR-like auxin-responsive protein family5.1e-0630.08Show/hide
Query:  KIISLLRKCKSLSRQLGRSSSYRSLRSKS----------------------------TKEDLWICERKMEEQEEDFGDHHQQLEKVSGNN-----VIIYV
        +++ +LR+CKS+S QLGRS SY SLRSKS                            TK+   I ++ ++    +     QQ  +   N      + +  
Subjt:  KIISLLRKCKSLSRQLGRSSSYRSLRSKS----------------------------TKEDLWICERKMEEQEEDFGDHHQQLEKVSGNN-----VIIYV

Query:  GIVLFDHLLWMLENSDPNISFYSNFEELAELYV
         +VLFDHLLWMLE  D  +    + ++ A LY+
Subjt:  GIVLFDHLLWMLENSDPNISFYSNFEELAELYV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGATAATTTCCCTATTGAGGAAATGCAAGAGCCTCTCAAGGCAATTGGGAAGATCCTCTTCTTATAGAAGCTTGAGGTCCAAATCCACAAAAGAAGATCTTTG
GATTTGTGAAAGAAAAATGGAAGAACAAGAAGAAGATTTTGGTGATCATCATCAGCAGCTTGAAAAGGTCAGTGGCAATAATGTAATTATATATGTTGGAATTGTTCTCT
TTGATCATCTCTTATGGATGTTGGAAAATTCTGATCCAAATATCAGTTTTTATTCAAATTTTGAAGAATTGGCTGAGCTTTATGTGTGTTATAATCTATTATATATATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGATAATTTCCCTATTGAGGAAATGCAAGAGCCTCTCAAGGCAATTGGGAAGATCCTCTTCTTATAGAAGCTTGAGGTCCAAATCCACAAAAGAAGATCTTTG
GATTTGTGAAAGAAAAATGGAAGAACAAGAAGAAGATTTTGGTGATCATCATCAGCAGCTTGAAAAGGTCAGTGGCAATAATGTAATTATATATGTTGGAATTGTTCTCT
TTGATCATCTCTTATGGATGTTGGAAAATTCTGATCCAAATATCAGTTTTTATTCAAATTTTGAAGAATTGGCTGAGCTTTATGTGTGTTATAATCTATTATATATATAA
Protein sequenceShow/hide protein sequence
MKKIISLLRKCKSLSRQLGRSSSYRSLRSKSTKEDLWICERKMEEQEEDFGDHHQQLEKVSGNNVIIYVGIVLFDHLLWMLENSDPNISFYSNFEELAELYVCYNLLYI