CuGenDBv2

Gene ID	Sed0022519
Organism	Sechium edule (Chayote v1)
Description	GBBH-like_N domain-containing protein
Genome location	LG08:29141238..29142706
RNA-Seq Expression	Sed0022519
Synteny	Sed0022519
Gene Ontology terms	GO:0046872 - metal ion binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8650784.1 hypothetical protein Csa_017608 [Cucumis sativus]

4.8e-18

93.75

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Query:  ILFDDLHKTGIYSWDYFFHLGSNKFTLLRNYVKTLKKYGLSRDPPRRK
        ILFDDLH+TGIYSWDYFFHLGSNKFTLLRNYVKTLKK+GLSRDPP+RK
Subjt:  ILFDDLHKTGIYSWDYFFHLGSNKFTLLRNYVKTLKKYGLSRDPPRRK

XP_008450051.1 PREDICTED: uncharacterized protein LOC103491759 isoform X1 [Cucumis melo]

1.1e-17

91.67

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Query:  ILFDDLHKTGIYSWDYFFHLGSNKFTLLRNYVKTLKKYGLSRDPPRRK
        ILFDDLH+TGIYSWDYF+HLGSNKFTLLRNYVKTLKK+GLSRDPP+RK
Subjt:  ILFDDLHKTGIYSWDYFFHLGSNKFTLLRNYVKTLKKYGLSRDPPRRK

XP_022154140.1 uncharacterized protein LOC111021468 isoform X1 [Momordica charantia]

1.4e-17

91.67

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Query:  ILFDDLHKTGIYSWDYFFHLGSNKFTLLRNYVKTLKKYGLSRDPPRRK
        ILFDDLHKTGIYSWDYF+HLGSNKFTLLRNYV+TL+K+GLSRDPPRRK
Subjt:  ILFDDLHKTGIYSWDYFFHLGSNKFTLLRNYVKTLKKYGLSRDPPRRK

XP_031737737.1 uncharacterized protein LOC101219823 isoform X1 [Cucumis sativus]

4.8e-18

93.75

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Query:  ILFDDLHKTGIYSWDYFFHLGSNKFTLLRNYVKTLKKYGLSRDPPRRK
        ILFDDLH+TGIYSWDYFFHLGSNKFTLLRNYVKTLKK+GLSRDPP+RK
Subjt:  ILFDDLHKTGIYSWDYFFHLGSNKFTLLRNYVKTLKKYGLSRDPPRRK

XP_038891561.1 uncharacterized protein LOC120080945 isoform X1 [Benincasa hispida]

1.1e-17

91.67

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Query:  ILFDDLHKTGIYSWDYFFHLGSNKFTLLRNYVKTLKKYGLSRDPPRRK
        ILFDDLH+TGIYSWDYF+HLGSNKFTLLRNYVKTLKK+GLSRDPP+RK
Subjt:  ILFDDLHKTGIYSWDYFFHLGSNKFTLLRNYVKTLKKYGLSRDPPRRK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LB75 GBBH-like_N domain-containing protein

2.3e-18

93.75

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Query:  ILFDDLHKTGIYSWDYFFHLGSNKFTLLRNYVKTLKKYGLSRDPPRRK
        ILFDDLH+TGIYSWDYFFHLGSNKFTLLRNYVKTLKK+GLSRDPP+RK
Subjt:  ILFDDLHKTGIYSWDYFFHLGSNKFTLLRNYVKTLKKYGLSRDPPRRK

A0A1S3BNF3 uncharacterized protein LOC103491759 isoform X1

5.2e-18

91.67

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Query:  ILFDDLHKTGIYSWDYFFHLGSNKFTLLRNYVKTLKKYGLSRDPPRRK
        ILFDDLH+TGIYSWDYF+HLGSNKFTLLRNYVKTLKK+GLSRDPP+RK
Subjt:  ILFDDLHKTGIYSWDYFFHLGSNKFTLLRNYVKTLKKYGLSRDPPRRK

A0A6J1DIS9 uncharacterized protein LOC111021468 isoform X1

6.8e-18

91.67

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Query:  ILFDDLHKTGIYSWDYFFHLGSNKFTLLRNYVKTLKKYGLSRDPPRRK
        ILFDDLHKTGIYSWDYF+HLGSNKFTLLRNYV+TL+K+GLSRDPPRRK
Subjt:  ILFDDLHKTGIYSWDYFFHLGSNKFTLLRNYVKTLKKYGLSRDPPRRK

A0A6J1J9C4 uncharacterized protein LOC111482460 isoform X1

1.5e-17

89.58

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Query:  ILFDDLHKTGIYSWDYFFHLGSNKFTLLRNYVKTLKKYGLSRDPPRRK
        ILFDDLH+TGIYSWDYF+HLGSNKFT LRNYVKTLKK+GLSRDPP+RK
Subjt:  ILFDDLHKTGIYSWDYFFHLGSNKFTLLRNYVKTLKKYGLSRDPPRRK

F6GX59 GBBH-like_N domain-containing protein

1.2e-17

87.5

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Query:  ILFDDLHKTGIYSWDYFFHLGSNKFTLLRNYVKTLKKYGLSRDPPRRK
        ILFDDLHKTGIY+WDYF+HLGSNKFTL+RNY+KTLKK+GL+RDPPRRK
Subjt:  ILFDDLHKTGIYSWDYFFHLGSNKFTLLRNYVKTLKKYGLSRDPPRRK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G27340.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 1035 Blast hits to 1035 proteins in 399 species: Archae - 0; Bacteria - 765; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 231 (source: NCBI BLink).

1.1e-15

71.11

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Query:  ILFDDLHKTGIYSWDYFFHLGSNKFTLLRNYVKTLKKYGLSRDPP
        ++FDDLH+TGIY WDYF+ LGSNKF L+RNY+KTL+K+ LSR+PP
Subjt:  ILFDDLHKTGIYSWDYFFHLGSNKFTLLRNYVKTLKKYGLSRDPP

AT3G27340.3 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 945 Blast hits to 945 proteins in 390 species: Archae - 0; Bacteria - 710; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 196 (source: NCBI BLink).

7.2e-12

71.05

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Query:  KTGIYSWDYFFHLGSNKFTLLRNYVKTLKKYGLSRDPP
        +TGIY WDYF+ LGSNKF L+RNY+KTL+K+ LSR+PP
Subjt:  KTGIYSWDYFFHLGSNKFTLLRNYVKTLKKYGLSRDPP

Sequences

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CDS sequence

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ATGTCTCCCGGTGTCTGGCCTAGGGACGGGCGTGGTTACCCTTGTTTCAAAAAAACAAAGAATTCAATAATTAAATGTATGTTTCTAAGTATAGGTAATATCAGGGCGGC
GTCATGCCTGCAGAACCAGTTGGGAACTATGGGGATACTTTTTGATGACTTGCATAAAACTGGGATTTATTCATGGGATTATTTCTTCCATCTGGGGAGCAACAAATTTA
CACTCTTGAGGAACTATGTCAAAACACTGAAGAAGTATGGCCTGAGCCGAGATCCACCAAGGAGAAAATGA

mRNA sequence

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AAAAAATTGAAGTTAATTGAAAGTATAAAAAAATAAAGTTTCTACGTCAAATAACTCGAATAAACAAAACGCATACATTTGAAATAGAAGTTAAACAAATTTAGTATCCT
TAACATAGACTTCGCATACTTGTTGGACTTCTTCATAAACTAATTCTAGGTTCTTTTTGTGGATATTAAGTTAGGATATTGATAAATAAATAAAACTTTAATAAGGTGCA
CGCCGTTCTTTTTGTGGATATTAAGTTAGGATATTGATAAATAAATAAAACTTTAATAAGGTGCTCGCCTTGGCCTAAGGCGAAGGCGATGCAGGGCGTAAAATGGCGAG
GAAAGGCGAGGGCCTGATTGAAGGAACTCGCCTTAGCTACGTTAGAGGCGCAATACCTGCCTATGTGCAAGGCGACGGCCATAGGCGAGGAAAGGCGATGGCCTTGAAAA
CACTGATATAGGGTTACACTAATTTTTTTATTTGGGGCTTTTTTTTTTCTTTTTTTCTTATGTCCTTGAGTGCGATTTTCTTACCCTCAAGATGCTTCTACTGTTGTATC
AACATCATCTATAATTTTGGATGTTTGCCACCAAGAACATTGTTCAAGTGACATGATGAAGGACCTAATGACGCAAAAATCTATAATTTTGGATGCTTTGTTCATCAGAT
TCAATAATTAAATGTTCCCAAGGGGTGGCATAGTGGTTGAAGACTTGGGCTTGAGGGTATGCTCTCCTCAAAGTCCCAGGTTTGAGACTCAGCTGTGACATCACTCCTTC
GATGTCTCCCGGTGTCTGGCCTAGGGACGGGCGTGGTTACCCTTGTTTCAAAAAAACAAAGAATTCAATAATTAAATGTATGTTTCTAAGTATAGGTAATATCAGGGCGG
CGTCATGCCTGCAGAACCAGTTGGGAACTATGGGGATACTTTTTGATGACTTGCATAAAACTGGGATTTATTCATGGGATTATTTCTTCCATCTGGGGAGCAACAAATTT
ACACTCTTGAGGAACTATGTCAAAACACTGAAGAAGTATGGCCTGAGCCGAGATCCACCAAGGAGAAAATGATGGACGAGTCAACTGTCCCCAGCTATGAGCATCTTATG
ATAGATAATTGTGAGTGTTCGGGTTAACTGATACATCCCTTAGCGAATCATCCATTGCTTTTTGTGCAATGATGTGATGGAATTTGAGATTATAACAATAGAATAGAGGC
TGTCTCAACACTGGCTGTTGAGAAAGATTCAAATGATGTACAGTGCATCAAAAACAATTTTCTAATACTCCTGGTTCAAAGGAAGAGTGTGGAAATAGATATTGTTAACA
TTAAAGAATCTTGTATTATTATCTA

Protein sequence

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MSPGVWPRDGRGYPCFKKTKNSIIKCMFLSIGNIRAASCLQNQLGTMGILFDDLHKTGIYSWDYFFHLGSNKFTLLRNYVKTLKKYGLSRDPPRRK

Sed0022519 (gene) of Chayote v1 genome