; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0022535 (gene) of Chayote v1 genome

Gene IDSed0022535
OrganismSechium edule (Chayote v1)
Descriptionsplicing factor 3A subunit 2
Genome locationLG04:28493536..28499442
RNA-Seq ExpressionSed0022535
SyntenySed0022535
Gene Ontology termsGO:0000245 - spliceosomal complex assembly (biological process)
GO:0005686 - U2 snRNP (cellular component)
GO:0071004 - U2-type prespliceosome (cellular component)
GO:0071013 - catalytic step 2 spliceosome (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000690 - Matrin/U1-C, C2H2-type zinc finger
IPR003604 - Matrin/U1-C-like, C2H2-type zinc finger
IPR031781 - SF3A2 domain
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043971.1 splicing factor 3A subunit 2 [Cucumis melo var. makuwa]9.0e-16590.31Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKT---------VKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLCAAEPYEIIAFKVPSTEIDKSTP
        KVSVRKT          KIGRPGYRVTKQFD ETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLL AAEPYEIIAFKVPSTEIDKSTP
Subjt:  KVSVRKT---------VKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLCAAEPYEIIAFKVPSTEIDKSTP

Query:  KFFSHWDPDSKMFTLQLYFKSKPQEANKPQTVPAANGTAPPGAPPPRPLPPPPQAPPPPPPTHQ-----------MPGSLPPPPSVMANGPPRPMLPGGA
        KFFSHWDPDSKMFTLQLYFKSKPQEANKP  VPAANGT P GA PPRPLPPPPQAPPPPPP  Q           MPGSLPPPPSVMANGPPRPM PGGA
Subjt:  KFFSHWDPDSKMFTLQLYFKSKPQEANKPQTVPAANGTAPPGAPPPRPLPPPPQAPPPPPPTHQ-----------MPGSLPPPPSVMANGPPRPMLPGGA

Query:  PPIPPPPPIGNNTMANFTPGTQMNRPPMPPPPQGFPGQVIRQPPPPPPNMG
        PPIPPPPP+GNNTMANFTPGTQMNRPPMPPPPQ FPGQ IRQPPPPPPNMG
Subjt:  PPIPPPPPIGNNTMANFTPGTQMNRPPMPPPPQGFPGQVIRQPPPPPPNMG

XP_004137848.1 splicing factor 3A subunit 2 [Cucumis sativus]3.9e-16893.27Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAA+AQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLCAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFD ETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLL AAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLCAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPQEANKPQTVPAANGTAPPGAPPPRPLPPPPQAPPPPPPTHQ-----------MPGSLPPPPSVMANGPPRPMLPGGAPPIPPPPPI
        SKMFTLQLYFKSKPQEANKP  VPAANGT P GA PPRPLPPPPQAPPPPPP  Q           MPGSLPPPPSVMANGPPRPM PGGAPPIPPPPPI
Subjt:  SKMFTLQLYFKSKPQEANKPQTVPAANGTAPPGAPPPRPLPPPPQAPPPPPPTHQ-----------MPGSLPPPPSVMANGPPRPMLPGGAPPIPPPPPI

Query:  GNNTMANFTPGTQMNRPPMPPPPQGFPGQVIRQPPPPPPNMG
        GNNTMANFTPGTQMNRPPMPPPPQGFPGQ IRQPPPPPPNMG
Subjt:  GNNTMANFTPGTQMNRPPMPPPPQGFPGQVIRQPPPPPPNMG

XP_008442733.1 PREDICTED: splicing factor 3A subunit 2 [Cucumis melo]1.1e-16792.98Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLCAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFD ETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLL AAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLCAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPQEANKPQTVPAANGTAPPGAPPPRPLPPPPQAPPPPPPTHQ-----------MPGSLPPPPSVMANGPPRPMLPGGAPPIPPPPPI
        SKMFTLQLYFKSKPQEANKP  VPAANGT P GA PPRPLPPPPQAPPPPPP  Q           MPGSLPPPPSVMANGPPRPM PGGAPPIPPPPP+
Subjt:  SKMFTLQLYFKSKPQEANKPQTVPAANGTAPPGAPPPRPLPPPPQAPPPPPPTHQ-----------MPGSLPPPPSVMANGPPRPMLPGGAPPIPPPPPI

Query:  GNNTMANFTPGTQMNRPPMPPPPQGFPGQVIRQPPPPPPNMG
        GNNTMANFTPGTQMNRPPMPPPPQ FPGQ IRQPPPPPPNMG
Subjt:  GNNTMANFTPGTQMNRPPMPPPPQGFPGQVIRQPPPPPPNMG

XP_023005145.1 splicing factor 3A subunit 2 [Cucurbita maxima]1.1e-16292.88Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLCAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFD ETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLL AAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLCAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPQEANKPQTVPAANGTA----PPGAPPPRPLPPPPQAPP--PPPPTHQMPGSLPPPPSVMANGPPRPMLPGGAPPIPPPPPIGNNTM
        SKMFTLQLYFKSKPQEANKPQTVPAANGT     PP APPP P PP   APP  PPPP   MPGSLPPPP VMANGPPRPM PGGAPPIPPPPP+GNNTM
Subjt:  SKMFTLQLYFKSKPQEANKPQTVPAANGTA----PPGAPPPRPLPPPPQAPP--PPPPTHQMPGSLPPPPSVMANGPPRPMLPGGAPPIPPPPPIGNNTM

Query:  ANFTPGTQMNRPPMPPPPQGFPGQVIRQPPPPPPNMG
        ANFTPGTQMNR PMPPPPQGFPGQ +RQPPPPPPNMG
Subjt:  ANFTPGTQMNRPPMPPPPQGFPGQVIRQPPPPPPNMG

XP_038905938.1 splicing factor 3A subunit 2 [Benincasa hispida]3.3e-16792.69Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLCAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFD ETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLL AAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLCAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPQEANKPQTVPAANGTAPPGAPPPRPLPPPPQAPPPPPPTHQ-----------MPGSLPPPPSVMANGPPRPMLPGGAPPIPPPPPI
        SKMFTLQLYFKSKPQEANKP  VPAANGT P GA PPRP+PPPPQAP PPPP  Q           MPGSLPPPPSVMANGPPRPM PGGAPPIPPPPP+
Subjt:  SKMFTLQLYFKSKPQEANKPQTVPAANGTAPPGAPPPRPLPPPPQAPPPPPPTHQ-----------MPGSLPPPPSVMANGPPRPMLPGGAPPIPPPPPI

Query:  GNNTMANFTPGTQMNRPPMPPPPQGFPGQVIRQPPPPPPNMG
        GNNTMANFTPGTQMNRPPMPPPPQGFPGQ IRQPPPPPPNMG
Subjt:  GNNTMANFTPGTQMNRPPMPPPPQGFPGQVIRQPPPPPPNMG

TrEMBL top hitse value%identityAlignment
A0A0A0LEB1 Matrin-type domain-containing protein1.9e-16893.27Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAA+AQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLCAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFD ETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLL AAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLCAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPQEANKPQTVPAANGTAPPGAPPPRPLPPPPQAPPPPPPTHQ-----------MPGSLPPPPSVMANGPPRPMLPGGAPPIPPPPPI
        SKMFTLQLYFKSKPQEANKP  VPAANGT P GA PPRPLPPPPQAPPPPPP  Q           MPGSLPPPPSVMANGPPRPM PGGAPPIPPPPPI
Subjt:  SKMFTLQLYFKSKPQEANKPQTVPAANGTAPPGAPPPRPLPPPPQAPPPPPPTHQ-----------MPGSLPPPPSVMANGPPRPMLPGGAPPIPPPPPI

Query:  GNNTMANFTPGTQMNRPPMPPPPQGFPGQVIRQPPPPPPNMG
        GNNTMANFTPGTQMNRPPMPPPPQGFPGQ IRQPPPPPPNMG
Subjt:  GNNTMANFTPGTQMNRPPMPPPPQGFPGQVIRQPPPPPPNMG

A0A1S3B729 splicing factor 3A subunit 25.5e-16892.98Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLCAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFD ETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLL AAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLCAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPQEANKPQTVPAANGTAPPGAPPPRPLPPPPQAPPPPPPTHQ-----------MPGSLPPPPSVMANGPPRPMLPGGAPPIPPPPPI
        SKMFTLQLYFKSKPQEANKP  VPAANGT P GA PPRPLPPPPQAPPPPPP  Q           MPGSLPPPPSVMANGPPRPM PGGAPPIPPPPP+
Subjt:  SKMFTLQLYFKSKPQEANKPQTVPAANGTAPPGAPPPRPLPPPPQAPPPPPPTHQ-----------MPGSLPPPPSVMANGPPRPMLPGGAPPIPPPPPI

Query:  GNNTMANFTPGTQMNRPPMPPPPQGFPGQVIRQPPPPPPNMG
        GNNTMANFTPGTQMNRPPMPPPPQ FPGQ IRQPPPPPPNMG
Subjt:  GNNTMANFTPGTQMNRPPMPPPPQGFPGQVIRQPPPPPPNMG

A0A5A7TQW8 Splicing factor 3A subunit 24.4e-16590.31Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKT---------VKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLCAAEPYEIIAFKVPSTEIDKSTP
        KVSVRKT          KIGRPGYRVTKQFD ETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLL AAEPYEIIAFKVPSTEIDKSTP
Subjt:  KVSVRKT---------VKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLCAAEPYEIIAFKVPSTEIDKSTP

Query:  KFFSHWDPDSKMFTLQLYFKSKPQEANKPQTVPAANGTAPPGAPPPRPLPPPPQAPPPPPPTHQ-----------MPGSLPPPPSVMANGPPRPMLPGGA
        KFFSHWDPDSKMFTLQLYFKSKPQEANKP  VPAANGT P GA PPRPLPPPPQAPPPPPP  Q           MPGSLPPPPSVMANGPPRPM PGGA
Subjt:  KFFSHWDPDSKMFTLQLYFKSKPQEANKPQTVPAANGTAPPGAPPPRPLPPPPQAPPPPPPTHQ-----------MPGSLPPPPSVMANGPPRPMLPGGA

Query:  PPIPPPPPIGNNTMANFTPGTQMNRPPMPPPPQGFPGQVIRQPPPPPPNMG
        PPIPPPPP+GNNTMANFTPGTQMNRPPMPPPPQ FPGQ IRQPPPPPPNMG
Subjt:  PPIPPPPPIGNNTMANFTPGTQMNRPPMPPPPQGFPGQVIRQPPPPPPNMG

A0A5D3DPC7 Splicing factor 3A subunit 25.5e-16892.98Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLCAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFD ETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLL AAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLCAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPQEANKPQTVPAANGTAPPGAPPPRPLPPPPQAPPPPPPTHQ-----------MPGSLPPPPSVMANGPPRPMLPGGAPPIPPPPPI
        SKMFTLQLYFKSKPQEANKP  VPAANGT P GA PPRPLPPPPQAPPPPPP  Q           MPGSLPPPPSVMANGPPRPM PGGAPPIPPPPP+
Subjt:  SKMFTLQLYFKSKPQEANKPQTVPAANGTAPPGAPPPRPLPPPPQAPPPPPPTHQ-----------MPGSLPPPPSVMANGPPRPMLPGGAPPIPPPPPI

Query:  GNNTMANFTPGTQMNRPPMPPPPQGFPGQVIRQPPPPPPNMG
        GNNTMANFTPGTQMNRPPMPPPPQ FPGQ IRQPPPPPPNMG
Subjt:  GNNTMANFTPGTQMNRPPMPPPPQGFPGQVIRQPPPPPPNMG

A0A6J1KWM2 splicing factor 3A subunit 25.3e-16392.88Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLCAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFD ETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLL AAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLCAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPQEANKPQTVPAANGTA----PPGAPPPRPLPPPPQAPP--PPPPTHQMPGSLPPPPSVMANGPPRPMLPGGAPPIPPPPPIGNNTM
        SKMFTLQLYFKSKPQEANKPQTVPAANGT     PP APPP P PP   APP  PPPP   MPGSLPPPP VMANGPPRPM PGGAPPIPPPPP+GNNTM
Subjt:  SKMFTLQLYFKSKPQEANKPQTVPAANGTA----PPGAPPPRPLPPPPQAPP--PPPPTHQMPGSLPPPPSVMANGPPRPMLPGGAPPIPPPPPIGNNTM

Query:  ANFTPGTQMNRPPMPPPPQGFPGQVIRQPPPPPPNMG
        ANFTPGTQMNR PMPPPPQGFPGQ +RQPPPPPPNMG
Subjt:  ANFTPGTQMNRPPMPPPPQGFPGQVIRQPPPPPPNMG

SwissProt top hitse value%identityAlignment
A5PJN8 Splicing factor 3A subunit 21.6e-7957.31Show/hide
Query:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR
        G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG+YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P K KV V+
Subjt:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR

Query:  KTVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLCAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT
        K VKIGRPGY+VTKQ D E  Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFKVPS EIDK+  KF++HW+ ++K F 
Subjt:  KTVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLCAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT

Query:  LQLYFKSKPQEANKPQTVPAANGTAPPGA---PPP-----RPLPPPPQAPPPPPPTHQMPGSLPPPPSVMANGPPRPMLPGGAPPIPPPPPIGNNTMANF
        LQ +FK +   A  P ++PA     PPG    PPP      P PP P++ PPPP     PG LP PP  M    P P  P G P +PPP P  +      
Subjt:  LQLYFKSKPQEANKPQTVPAANGTAPPGA---PPP-----RPLPPPPQAPPPPPPTHQMPGSLPPPPSVMANGPPRPMLPGGAPPIPPPPPIGNNTMANF

Query:  TPGTQMNRPPMP---PPPQGF--PGQVIRQPP----PPPPNM
         P      PP P   PP  G   P  V+  P     PP P +
Subjt:  TPGTQMNRPPMP---PPPQGF--PGQVIRQPP----PPPPNM

Q15428 Splicing factor 3A subunit 25.4e-8057.4Show/hide
Query:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR
        G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG+YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P K KV V+
Subjt:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR

Query:  KTVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLCAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT
        K VKIGRPGY+VTKQ D E  Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFKVPS EIDK+  KF++HW+ ++K F 
Subjt:  KTVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLCAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT

Query:  LQLYFKSKPQEANKPQTVPAANGTAPPGA---PPP-----RPLPPPPQAPPPPPPTHQMPGSLP----PPPSVMANGPP-RPMLPGGAPPIPPPPPIGNN
        LQ +FK +   A  P ++PA     PPG    PPP      P PP P++ PPPP     PG LP    PP     +GPP  P LP  AP + PP P+ + 
Subjt:  LQLYFKSKPQEANKPQTVPAANGTAPPGA---PPP-----RPLPPPPQAPPPPPPTHQMPGSLP----PPPSVMANGPP-RPMLPGGAPPIPPPPPIGNN

Query:  TMANFTPGTQMNRPPMP---PPPQGFPGQVIRQPPPPP
          +   P      PP P   PP  G         PP P
Subjt:  TMANFTPGTQMNRPPMP---PPPQGFPGQVIRQPPPPP

Q54B65 Splicing factor 3A subunit 21.4e-6460.28Show/hide
Query:  EWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPH---KR
        E+G K GSGG  S+Q + IDRRER ++L LE +D++KDPY + NH+GS+EC+LCLT+HNN GNYLAHTQGK+HQT+LA+RAA+E +E P+  + +     
Subjt:  EWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPH---KR

Query:  KVSVRKTVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLCAAEPYEIIAFKVPSTEIDKST---PKFFSHW
        +V  +KT+KIGRPGY++ KQ D +T Q SLLFQI+YPEIE   +PRHR MS++EQRV+  +K YQYLL AAEPYE IAFK+P+ EID++T    KFF+HW
Subjt:  KVSVRKTVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLCAAEPYEIIAFKVPSTEIDKST---PKFFSHW

Query:  DPDSKMFTLQLYFK
        D  +K FTLQLYFK
Subjt:  DPDSKMFTLQLYFK

Q62203 Splicing factor 3A subunit 27.6e-7455.94Show/hide
Query:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR
        G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG+YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P + KV V+
Subjt:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR

Query:  KTVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLCAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT
        K VKIGRPGY+VTKQ D E  Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFKVPS EIDK+  KF          F 
Subjt:  KTVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLCAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT

Query:  LQLYFKSKPQEANKPQTVPAANGTAPPGA---PPP-----RPLPPPPQAPPPPPPTHQMPGSLP----PPPSVMANGPP-RPMLPGGAPPIPPPPPIGNN
        LQ +FK +   A  P ++PA     PPG    PPP      P PP P A PPPP     PG LP    PP     +GPP  P +P  AP + PP P+ + 
Subjt:  LQLYFKSKPQEANKPQTVPAANGTAPPGA---PPP-----RPLPPPPQAPPPPPPTHQMPGSLP----PPPSVMANGPP-RPMLPGGAPPIPPPPPIGNN

Query:  TMANFTPGTQMNRPPMP---PPPQGFPGQVIRQPPPP---PPNMG
          +   P      PP P   PP  G        PP P   PP  G
Subjt:  TMANFTPGTQMNRPPMP---PPPQGFPGQVIRQPPPP---PPNMG

Q6AXT8 Splicing factor 3A subunit 25.4e-8057.4Show/hide
Query:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR
        G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG+YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P K KV V+
Subjt:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR

Query:  KTVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLCAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT
        K VKIGRPGY+VTKQ D E  Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFKVPS EIDK+  KF++HW+ ++K F 
Subjt:  KTVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLCAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT

Query:  LQLYFKSKPQEANKPQTVPAANGTAPPGA---PPP-----RPLPPPPQAPPPPPPTHQMPGSLP----PPPSVMANGPP-RPMLPGGAPPIPPPPPIGNN
        LQ +FK +   A  P ++PA     PPG    PPP      P PP P A PPPP     PG LP    PP     +GPP  P +P  AP + PP P+ + 
Subjt:  LQLYFKSKPQEANKPQTVPAANGTAPPGA---PPP-----RPLPPPPQAPPPPPPTHQMPGSLP----PPPSVMANGPP-RPMLPGGAPPIPPPPPIGNN

Query:  TMANFTPGTQMNRPPMP---PPPQGFPGQVIRQPPPPP
          +   P      PP P   PP  G         PP P
Subjt:  TMANFTPGTQMNRPPMP---PPPQGFPGQVIRQPPPPP

Arabidopsis top hitse value%identityAlignment
AT2G32600.1 hydroxyproline-rich glycoprotein family protein6.7e-11881.36Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAAS QNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAK+AP +PQP KR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLCAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
         VSVR+TVKIGRPGYRVTKQ+DPE +QRSLLFQIEYPEIED  KPRHRFMSSYEQ+VQP+DK YQYLL AAEPYEIIAFKVPSTE+DKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLCAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPQEANKPQTVPAANGTAPPGAPPPRPLPPPPQAPPPPPPTHQMPGSLPPPPSVMANGPPRPMLPGG
        SKMFTLQ+YFK    E NKPQ+   ANG  PP      P PPP QA PPPPP     G  PPPP  MAN   RPM P G
Subjt:  SKMFTLQLYFKSKPQEANKPQTVPAANGTAPPGAPPPRPLPPPPQAPPPPPPTHQMPGSLPPPPSVMANGPPRPMLPGG

AT5G07740.1 actin binding6.5e-0442.97Show/hide
Query:  PQTVPAANGTAPP--------GAPPPRPLPPP----PQAPPPPPPTHQMPGSLPPPPSVMANG----PPRPMLPGGAPPIPPPPPIGNNTMANFTPGTQM
        P   P + G+ PP        G+PPP P PPP    P  PPPPP +H      PPPP  M  G    PP P + GGAPP PPPPP+         P    
Subjt:  PQTVPAANGTAPP--------GAPPPRPLPPP----PQAPPPPPPTHQMPGSLPPPPSVMANG----PPRPMLPGGAPPIPPPPPIGNNTMANFTPGTQM

Query:  NRPPMPPPPQGFPGQVIRQPPPPPPNMG
           P PPPP  F G    QPPPPPP  G
Subjt:  NRPPMPPPPQGFPGQVIRQPPPPPPNMG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAGAGAGTGGGGGTCGAAGCCGGGAAGTGGCGGAGCCGCCTCCGCACAGAATGAAGCCATCGATCGGAGAGAGCGTCTCCGACGGCTTGCTCTCGAGACCATCGA
TCTCGCCAAGGATCCCTACTTCATGCGCAATCATCTTGGAAGTTATGAATGTAAGCTTTGCCTGACTCTGCACAACAATGAGGGGAATTACTTAGCGCACACGCAGGGGA
AGCGCCATCAGACTAATTTGGCCAAAAGAGCAGCCCGTGAAGCCAAGGAGGCTCCTGCTCAACCTCAGCCTCACAAGAGGAAGGTCTCTGTTCGTAAAACAGTTAAAATT
GGAAGGCCCGGTTATCGAGTAACTAAGCAATTTGATCCTGAGACAAAACAGAGATCTTTGCTTTTCCAGATTGAATATCCCGAAATTGAAGACCTAGCAAAGCCAAGACA
TCGGTTTATGTCCTCATATGAGCAGCGGGTGCAACCATTTGATAAAAGATACCAATATCTTCTCTGTGCAGCTGAACCATACGAGATAATTGCATTCAAGGTTCCAAGCA
CTGAGATCGACAAATCCACACCAAAATTCTTCTCACACTGGGATCCGGACTCAAAAATGTTCACGTTGCAATTGTATTTCAAGTCCAAGCCACAAGAGGCAAACAAGCCA
CAAACTGTGCCTGCAGCCAACGGAACAGCACCACCTGGTGCGCCACCACCGAGGCCACTGCCGCCACCACCACAAGCTCCACCACCGCCACCTCCAACTCACCAAATGCC
AGGATCCCTGCCGCCGCCTCCTTCTGTAATGGCAAATGGGCCTCCTAGGCCAATGCTTCCTGGTGGGGCTCCGCCCATCCCTCCACCGCCTCCGATTGGTAACAATACAA
TGGCGAATTTCACTCCTGGTACTCAGATGAATAGACCTCCCATGCCACCTCCCCCGCAGGGCTTCCCGGGCCAGGTTATCCGTCAGCCACCACCGCCACCACCCAATATG
GGATAA
mRNA sequenceShow/hide mRNA sequence
ATTCGATAACACAAAGGCTTCGCTTAGGTCGCCGGAAGAAGGAAGAAGAAGCTTTGTGAGTCGCAAATCGGAAGAACCGTCGCCGGCGATGGACAGAGAGTGGGGGTCGA
AGCCGGGAAGTGGCGGAGCCGCCTCCGCACAGAATGAAGCCATCGATCGGAGAGAGCGTCTCCGACGGCTTGCTCTCGAGACCATCGATCTCGCCAAGGATCCCTACTTC
ATGCGCAATCATCTTGGAAGTTATGAATGTAAGCTTTGCCTGACTCTGCACAACAATGAGGGGAATTACTTAGCGCACACGCAGGGGAAGCGCCATCAGACTAATTTGGC
CAAAAGAGCAGCCCGTGAAGCCAAGGAGGCTCCTGCTCAACCTCAGCCTCACAAGAGGAAGGTCTCTGTTCGTAAAACAGTTAAAATTGGAAGGCCCGGTTATCGAGTAA
CTAAGCAATTTGATCCTGAGACAAAACAGAGATCTTTGCTTTTCCAGATTGAATATCCCGAAATTGAAGACCTAGCAAAGCCAAGACATCGGTTTATGTCCTCATATGAG
CAGCGGGTGCAACCATTTGATAAAAGATACCAATATCTTCTCTGTGCAGCTGAACCATACGAGATAATTGCATTCAAGGTTCCAAGCACTGAGATCGACAAATCCACACC
AAAATTCTTCTCACACTGGGATCCGGACTCAAAAATGTTCACGTTGCAATTGTATTTCAAGTCCAAGCCACAAGAGGCAAACAAGCCACAAACTGTGCCTGCAGCCAACG
GAACAGCACCACCTGGTGCGCCACCACCGAGGCCACTGCCGCCACCACCACAAGCTCCACCACCGCCACCTCCAACTCACCAAATGCCAGGATCCCTGCCGCCGCCTCCT
TCTGTAATGGCAAATGGGCCTCCTAGGCCAATGCTTCCTGGTGGGGCTCCGCCCATCCCTCCACCGCCTCCGATTGGTAACAATACAATGGCGAATTTCACTCCTGGTAC
TCAGATGAATAGACCTCCCATGCCACCTCCCCCGCAGGGCTTCCCGGGCCAGGTTATCCGTCAGCCACCACCGCCACCACCCAATATGGGATAAACCACAGAAGATCAGT
TAAATAGCAAGGCCTAGGAATACAATTTGGTACTGTACTTGCAGCGAATTTTAATTGTTGGCCTCGTTACAGAAGTTTTCAAGCACTTTTAAGTTGTATGATCATATTTT
GGCATGTAACATGCTTTGATTGTTGTATCTTTTCAGGCAAAGTAAAATATATTTTTTAATGGTCTTTTATTTTCATGGTAAAATCATGTTTTACGTCCTTGTTTATTATT
GGAAAATTACTCTAGACAGCAGATTTTTAGATGTATATTTTAATCAAAG
Protein sequenceShow/hide protein sequence
MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKI
GRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLCAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKP
QTVPAANGTAPPGAPPPRPLPPPPQAPPPPPPTHQMPGSLPPPPSVMANGPPRPMLPGGAPPIPPPPPIGNNTMANFTPGTQMNRPPMPPPPQGFPGQVIRQPPPPPPNM
G