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Sed0022538 (gene) of Chayote v1 genome

Gene IDSed0022538
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG12:4342201..4342950
RNA-Seq ExpressionSed0022538
SyntenySed0022538
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147637.1 uncharacterized protein LOC101206709 [Cucumis sativus]9.6e-2884.34Show/hide
Query:  MASWKKTIISPFRKACTIFNQNPRD-SKKSHSDSEQEKRLNVRDLQGEVMACGYEDVQVMWSILD-KAKSTTTTTITTCNVSS
        MASWKKTIISPFRKACTIFNQNPRD  KKSHSDSEQEKR++VR+LQGEVMACGYEDV VMWSILD KA S  TT   TCNVSS
Subjt:  MASWKKTIISPFRKACTIFNQNPRD-SKKSHSDSEQEKRLNVRDLQGEVMACGYEDVQVMWSILD-KAKSTTTTTITTCNVSS
XP_008439007.1 PREDICTED: uncharacterized protein LOC103483930 isoform X3 [Cucumis melo]3.9e-2985.37Show/hide
Query:  MASWKKTIISPFRKACTIFNQNPRDSKKSHSDSEQEKRLNVRDLQGEVMACGYEDVQVMWSILD-KAKSTTTTTITTCNVSS
        MASWKKTIISPFRKACTIFNQNPRD KKSHSDSEQEKR++VR+LQGEVMACGYEDV VMWSILD KA S  TT   TCNVSS
Subjt:  MASWKKTIISPFRKACTIFNQNPRDSKKSHSDSEQEKRLNVRDLQGEVMACGYEDVQVMWSILD-KAKSTTTTTITTCNVSS
XP_022138108.1 uncharacterized protein LOC111009357 [Momordica charantia]7.4e-2883.95Show/hide
Query:  MASWKKTIISPFRKACTIFNQNPRDSKKSHSDSEQEKRLNVRDLQGEVMACGYEDVQVMWSILDKAKSTTTTTITTCNVSS
        MASWKKTIISPFRKACTIFNQ PRD KKSHSDSEQEKR++VRDLQGEVMACGYEDV VMWSILDKA S    T   CNVSS
Subjt:  MASWKKTIISPFRKACTIFNQNPRDSKKSHSDSEQEKRLNVRDLQGEVMACGYEDVQVMWSILDKAKSTTTTTITTCNVSS
XP_022980000.1 uncharacterized protein LOC111479526 [Cucurbita maxima]3.3e-2885.19Show/hide
Query:  MASWKKTIISPFRKACTIFNQNPRDSKKSHSDSEQEKRLNVRDLQGEVMACGYEDVQVMWSILDKAKSTTTTTITTCNVSS
        MASWKKTIISPFRKACTIFNQ+PRD KKS SDSEQEKR++VR+LQGEVMACGYEDV VMWSILDKA STTT   T CNVSS
Subjt:  MASWKKTIISPFRKACTIFNQNPRDSKKSHSDSEQEKRLNVRDLQGEVMACGYEDVQVMWSILDKAKSTTTTTITTCNVSS
XP_038898749.1 uncharacterized protein LOC120086267 [Benincasa hispida]2.3e-2985.19Show/hide
Query:  MASWKKTIISPFRKACTIFNQNPRDSKKSHSDSEQEKRLNVRDLQGEVMACGYEDVQVMWSILDKAKSTTTTTITTCNVSS
        MASWKKTIISPFRKACTIFNQN RD KKSHSDSEQEKR++VR+LQGEVMACGYEDV VMWSILDKA S  T T  TCNVSS
Subjt:  MASWKKTIISPFRKACTIFNQNPRDSKKSHSDSEQEKRLNVRDLQGEVMACGYEDVQVMWSILDKAKSTTTTTITTCNVSS
TrEMBL top hitse value%identityAlignment
A0A0A0L5H1 Uncharacterized protein4.7e-2884.34Show/hide
Query:  MASWKKTIISPFRKACTIFNQNPRD-SKKSHSDSEQEKRLNVRDLQGEVMACGYEDVQVMWSILD-KAKSTTTTTITTCNVSS
        MASWKKTIISPFRKACTIFNQNPRD  KKSHSDSEQEKR++VR+LQGEVMACGYEDV VMWSILD KA S  TT   TCNVSS
Subjt:  MASWKKTIISPFRKACTIFNQNPRD-SKKSHSDSEQEKRLNVRDLQGEVMACGYEDVQVMWSILD-KAKSTTTTTITTCNVSS
A0A1S3AXS6 uncharacterized protein LOC103483930 isoform X31.9e-2985.37Show/hide
Query:  MASWKKTIISPFRKACTIFNQNPRDSKKSHSDSEQEKRLNVRDLQGEVMACGYEDVQVMWSILD-KAKSTTTTTITTCNVSS
        MASWKKTIISPFRKACTIFNQNPRD KKSHSDSEQEKR++VR+LQGEVMACGYEDV VMWSILD KA S  TT   TCNVSS
Subjt:  MASWKKTIISPFRKACTIFNQNPRDSKKSHSDSEQEKRLNVRDLQGEVMACGYEDVQVMWSILD-KAKSTTTTTITTCNVSS
A0A5A7U9W0 Uncharacterized protein1.9e-2985.37Show/hide
Query:  MASWKKTIISPFRKACTIFNQNPRDSKKSHSDSEQEKRLNVRDLQGEVMACGYEDVQVMWSILD-KAKSTTTTTITTCNVSS
        MASWKKTIISPFRKACTIFNQNPRD KKSHSDSEQEKR++VR+LQGEVMACGYEDV VMWSILD KA S  TT   TCNVSS
Subjt:  MASWKKTIISPFRKACTIFNQNPRDSKKSHSDSEQEKRLNVRDLQGEVMACGYEDVQVMWSILD-KAKSTTTTTITTCNVSS
A0A6J1CC51 uncharacterized protein LOC1110093573.6e-2883.95Show/hide
Query:  MASWKKTIISPFRKACTIFNQNPRDSKKSHSDSEQEKRLNVRDLQGEVMACGYEDVQVMWSILDKAKSTTTTTITTCNVSS
        MASWKKTIISPFRKACTIFNQ PRD KKSHSDSEQEKR++VRDLQGEVMACGYEDV VMWSILDKA S    T   CNVSS
Subjt:  MASWKKTIISPFRKACTIFNQNPRDSKKSHSDSEQEKRLNVRDLQGEVMACGYEDVQVMWSILDKAKSTTTTTITTCNVSS
A0A6J1IUX8 uncharacterized protein LOC1114795261.6e-2885.19Show/hide
Query:  MASWKKTIISPFRKACTIFNQNPRDSKKSHSDSEQEKRLNVRDLQGEVMACGYEDVQVMWSILDKAKSTTTTTITTCNVSS
        MASWKKTIISPFRKACTIFNQ+PRD KKS SDSEQEKR++VR+LQGEVMACGYEDV VMWSILDKA STTT   T CNVSS
Subjt:  MASWKKTIISPFRKACTIFNQNPRDSKKSHSDSEQEKRLNVRDLQGEVMACGYEDVQVMWSILDKAKSTTTTTITTCNVSS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G48330.1 unknown protein8.1e-1755.71Show/hide
Query:  MASWKKTIISPFRKACTIFNQNPRDSKKSHSDS-EQEKRLNVRDLQGEVMACGYEDVQVMWSILDKAKST
        MASWKKTI +PF+KA T FNQ  + ++ +++ + E+ ++  V++LQG+VMACGYEDV VMWSILDK+ S+
Subjt:  MASWKKTIISPFRKACTIFNQNPRDSKKSHSDS-EQEKRLNVRDLQGEVMACGYEDVQVMWSILDKAKST
AT3G17580.1 unknown protein6.2e-1757.89Show/hide
Query:  MASWKKTIISPFRKACTIFNQNPRDSKK-------SHSDSEQEKRLNVRDLQGEVMACGYEDVQVMWSILDKAKST
        MASWKKTI +PF+KA T FNQ  +  KK       + +  E EKR+ V++LQGEVMACGY+DV VMWSILDK+ S+
Subjt:  MASWKKTIISPFRKACTIFNQNPRDSKK-------SHSDSEQEKRLNVRDLQGEVMACGYEDVQVMWSILDKAKST

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTTGGAAGAAAACCATAATTTCTCCCTTTCGAAAGGCTTGCACCATCTTCAACCAAAACCCGAGAGACTCGAAGAAATCTCACTCCGACTCCGAGCAAGAAAA
ACGATTGAACGTGAGAGATCTACAAGGAGAGGTGATGGCATGTGGCTATGAAGACGTGCAGGTGATGTGGTCTATTTTAGACAAGGCTAAGTCTACAACGACTACCACTA
TCACTACTTGCAACGTGTCTTCTTGA
mRNA sequenceShow/hide mRNA sequence
GCTTTCTCTTCTTCTCTTGCAAAGCTTTGGTATATATTCTCTGCTATTTCACTTTCCAACCCTTTTCACCCAAACACACATTCACATTTAGCAATGGCTTCTTGGAAGAA
AACCATAATTTCTCCCTTTCGAAAGGCTTGCACCATCTTCAACCAAAACCCGAGAGACTCGAAGAAATCTCACTCCGACTCCGAGCAAGAAAAACGATTGAACGTGAGAG
ATCTACAAGGAGAGGTGATGGCATGTGGCTATGAAGACGTGCAGGTGATGTGGTCTATTTTAGACAAGGCTAAGTCTACAACGACTACCACTATCACTACTTGCAACGTG
TCTTCTTGACAATTGTCGTTATCGTTACCATTGTCGTTATCATCGATGTTGGTTGCTTCATTGTTGTATATAAAAGCACAAAACTTCTCTCTCTCAATCTCTCTTTCTAT
GTTATTTTTTAGTGGATGATTTTGGAATGGGTAGGGAATGGAATCCC
Protein sequenceShow/hide protein sequence
MASWKKTIISPFRKACTIFNQNPRDSKKSHSDSEQEKRLNVRDLQGEVMACGYEDVQVMWSILDKAKSTTTTTITTCNVSS