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Sed0022545 (gene) of Chayote v1 genome

Gene IDSed0022545
OrganismSechium edule (Chayote v1)
DescriptionWound-responsive family protein
Genome locationLG05:41302549..41302800
RNA-Seq ExpressionSed0022545
SyntenySed0022545
Gene Ontology termsNA
InterPro domainsIPR022251 - Protein of unknown function wound-induced


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AFK33814.1 unknown [Medicago truncatula]2.3e-0847.78Show/hide
Query:  MSYLGRVWMAASVAVGQ--SDGRHKATQGPISLHQNLRVSSSAAETTSVVDLRP-----ISTAASHPNRDGEAQDESLRRVMYFNCWGQG
        MSYL RVWMAA+VAV Q  +D  HK      S+HQN     SA    S+ DLRP     +S  +S  +      D+SLR+VMY NCWGQG
Subjt:  MSYLGRVWMAASVAVGQ--SDGRHKATQGPISLHQNLRVSSSAAETTSVVDLRP-----ISTAASHPNRDGEAQDESLRRVMYFNCWGQG

KAA0047914.1 wound-responsive family protein [Cucumis melo var. makuwa]2.4e-1360.22Show/hide
Query:  MSYLG---RVWMAASVAV---GQSD-GRHKATQGPISLHQNLRVSSSAAETTSVVDLRPISTAASHPNRDGEAQ---DESLRRVMYFNCWGQG
        MSYLG   R+WM ASVAV   GQSD G H+AT+G +SL Q LRVSS  AETT+ V+LRPIS+A +    D + +   +ESLRRVMY NCWGQG
Subjt:  MSYLG---RVWMAASVAV---GQSD-GRHKATQGPISLHQNLRVSSSAAETTSVVDLRPISTAASHPNRDGEAQ---DESLRRVMYFNCWGQG

KAG6604822.1 Vesicle-associated protein 4-2, partial [Cucurbita argyrosperma subsp. sororia]5.8e-2066.67Show/hide
Query:  MSYLGRVWMAASVAV---GQSDGRHKATQGPISLHQNLRVSSSAAETTSV-VDLRPISTAASHPNRDGEAQ---DESLRRVMYFNCWGQG
        MSYLGRVWMAASVAV   GQSDGRH + +G ++LH+N       AETT+V VDLR  STA SH NRDG+ +   DESLRRVMYFNCWGQG
Subjt:  MSYLGRVWMAASVAV---GQSDGRHKATQGPISLHQNLRVSSSAAETTSV-VDLRPISTAASHPNRDGEAQ---DESLRRVMYFNCWGQG

KAG7034937.1 hypothetical protein SDJN02_01730, partial [Cucurbita argyrosperma subsp. argyrosperma]5.8e-2066.67Show/hide
Query:  MSYLGRVWMAASVAV---GQSDGRHKATQGPISLHQNLRVSSSAAETTSV-VDLRPISTAASHPNRDGEAQ---DESLRRVMYFNCWGQG
        MSYLGRVWMAASVAV   GQSDGRH + +G ++LH+N       AETT+V VDLR  STA SH NRDG+ +   DESLRRVMYFNCWGQG
Subjt:  MSYLGRVWMAASVAV---GQSDGRHKATQGPISLHQNLRVSSSAAETTSV-VDLRPISTAASHPNRDGEAQ---DESLRRVMYFNCWGQG

XP_013465029.1 uncharacterized protein LOC25487598 [Medicago truncatula]1.7e-0847.78Show/hide
Query:  MSYLGRVWMAASVAV--GQSDGRHKATQGPISLHQNLRVSSSAAETTSVVDLRP-----ISTAASHPNRDGEAQDESLRRVMYFNCWGQG
        MSYL RVWMAA+VAV  G +D  HK      S+HQN     SA    S+ DLRP     +S  +S  +      D+SLR+VMY NCWGQG
Subjt:  MSYLGRVWMAASVAV--GQSDGRHKATQGPISLHQNLRVSSSAAETTSVVDLRP-----ISTAASHPNRDGEAQDESLRRVMYFNCWGQG

TrEMBL top hitse value%identityAlignment
A0A072VAJ9 Wound-responsive family protein8.5e-0947.78Show/hide
Query:  MSYLGRVWMAASVAV--GQSDGRHKATQGPISLHQNLRVSSSAAETTSVVDLRP-----ISTAASHPNRDGEAQDESLRRVMYFNCWGQG
        MSYL RVWMAA+VAV  G +D  HK      S+HQN     SA    S+ DLRP     +S  +S  +      D+SLR+VMY NCWGQG
Subjt:  MSYLGRVWMAASVAV--GQSDGRHKATQGPISLHQNLRVSSSAAETTSVVDLRP-----ISTAASHPNRDGEAQDESLRRVMYFNCWGQG

A0A2K3PNW2 Uncharacterized protein1.4e-0846.74Show/hide
Query:  MSYLGRVWMAASVAV--GQSDGRHKATQGPISLHQNLRVSSSAAETTSVVDLRPIS-------TAASHPNRDGEAQDESLRRVMYFNCWGQG
        MSYL RVWMAA+VAV  G +D  HK      S+HQN     SA    S+ DLRP+S       + +S  +      D+SLR+VMY NCWGQG
Subjt:  MSYLGRVWMAASVAV--GQSDGRHKATQGPISLHQNLRVSSSAAETTSVVDLRPIS-------TAASHPNRDGEAQDESLRRVMYFNCWGQG

A0A2Z6N4H0 Uncharacterized protein5.5e-0845.65Show/hide
Query:  MSYLGRVWMAASVAV--GQSDGRHKATQGPISLHQNLRVSSSAAETTSVVDLRPIS-------TAASHPNRDGEAQDESLRRVMYFNCWGQG
        MSYL RVWMAA+VAV  G +D  HK      S+HQN     SA    ++ DLRP+S       + +S  +      D+SLR+VMY NCWGQG
Subjt:  MSYLGRVWMAASVAV--GQSDGRHKATQGPISLHQNLRVSSSAAETTSVVDLRPIS-------TAASHPNRDGEAQDESLRRVMYFNCWGQG

A0A5A7TY19 Wound-responsive family protein1.1e-1360.22Show/hide
Query:  MSYLG---RVWMAASVAV---GQSD-GRHKATQGPISLHQNLRVSSSAAETTSVVDLRPISTAASHPNRDGEAQ---DESLRRVMYFNCWGQG
        MSYLG   R+WM ASVAV   GQSD G H+AT+G +SL Q LRVSS  AETT+ V+LRPIS+A +    D + +   +ESLRRVMY NCWGQG
Subjt:  MSYLG---RVWMAASVAV---GQSD-GRHKATQGPISLHQNLRVSSSAAETTSVVDLRPISTAASHPNRDGEAQ---DESLRRVMYFNCWGQG

I3S0M2 Uncharacterized protein1.1e-0847.78Show/hide
Query:  MSYLGRVWMAASVAVGQ--SDGRHKATQGPISLHQNLRVSSSAAETTSVVDLRP-----ISTAASHPNRDGEAQDESLRRVMYFNCWGQG
        MSYL RVWMAA+VAV Q  +D  HK      S+HQN     SA    S+ DLRP     +S  +S  +      D+SLR+VMY NCWGQG
Subjt:  MSYLGRVWMAASVAVGQ--SDGRHKATQGPISLHQNLRVSSSAAETTSVVDLRP-----ISTAASHPNRDGEAQDESLRRVMYFNCWGQG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G28240.1 Wound-responsive family protein6.4e-0941.86Show/hide
Query:  MSYLGRVWMAASVAVGQSDGRH--KATQGPISLHQNLRVSSSAAETTSVVDLRPISTAASHPNR-DGEAQDESLRRVMYFNCWGQG
        MSYL +VWMAAS    Q +  H  K   G  S H+  R  SS     +  DL   S  +    R      DESLR+VMY NCW QG
Subjt:  MSYLGRVWMAASVAVGQSDGRH--KATQGPISLHQNLRVSSSAAETTSVVDLRPISTAASHPNR-DGEAQDESLRRVMYFNCWGQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTATCTTGGTCGGGTATGGATGGCGGCCAGTGTAGCCGTCGGCCAATCGGACGGCCGCCACAAGGCCACCCAAGGACCCATTTCTCTGCACCAAAACCTTAGAGT
TTCATCGTCGGCGGCGGAAACAACTAGCGTCGTAGATCTCCGCCCGATCTCAACGGCGGCGAGTCACCCCAACCGTGACGGAGAAGCCCAAGATGAGTCGCTTCGCCGAG
TCATGTATTTCAACTGCTGGGGGCAGGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCTATCTTGGTCGGGTATGGATGGCGGCCAGTGTAGCCGTCGGCCAATCGGACGGCCGCCACAAGGCCACCCAAGGACCCATTTCTCTGCACCAAAACCTTAGAGT
TTCATCGTCGGCGGCGGAAACAACTAGCGTCGTAGATCTCCGCCCGATCTCAACGGCGGCGAGTCACCCCAACCGTGACGGAGAAGCCCAAGATGAGTCGCTTCGCCGAG
TCATGTATTTCAACTGCTGGGGGCAGGGCTAA
Protein sequenceShow/hide protein sequence
MSYLGRVWMAASVAVGQSDGRHKATQGPISLHQNLRVSSSAAETTSVVDLRPISTAASHPNRDGEAQDESLRRVMYFNCWGQG