CuGenDBv2

Gene ID	Sed0022581
Organism	Sechium edule (Chayote v1)
Description	40S ribosomal protein S3a
Genome location	LG09:13618495..13622566
RNA-Seq Expression	Sed0022581
Synteny	Sed0022581
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001593 - Ribosomal protein S3Ae IPR018281 - Ribosomal protein S3Ae, conserved site IPR027500 - 40S ribosomal protein S1/3, eukaryotes

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022138569.1 40S ribosomal protein S3a [Momordica charantia]

1.9e-138

97.69

Show/hide

Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKK VDPFAKKDWYDIKAPSVF++KNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIM NQATSCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVE ATEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA

XP_022930511.1 40S ribosomal protein S3a-like [Cucurbita moschata]

6.0e-140

98.85

Show/hide

Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFN+KNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIM NQATSCDLKELVRKFIPESIGK IEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA

XP_022959011.1 40S ribosomal protein S3a-like [Cucurbita moschata]

8.7e-139

98.08

Show/hide

Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFN+KNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIM NQATSCDLKELVRKFIPE IGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPA+EVVE ATEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA

XP_023000239.1 40S ribosomal protein S3a-like [Cucurbita maxima]

9.3e-141

99.23

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Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFN+KNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIM NQATSCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA

XP_023006746.1 40S ribosomal protein S3a-like [Cucurbita maxima]

1.8e-139

98.46

Show/hide

Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFN+KNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIM NQATSCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPA+EVVE ATEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CAG4 40S ribosomal protein S3a

9.4e-139

97.69

Show/hide

Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKK VDPFAKKDWYDIKAPSVF++KNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIM NQATSCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVE ATEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA

A0A6J1ER42 40S ribosomal protein S3a

2.9e-140

98.85

Show/hide

Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFN+KNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIM NQATSCDLKELVRKFIPESIGK IEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA

A0A6J1H3P8 40S ribosomal protein S3a

4.2e-139

98.08

Show/hide

Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFN+KNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIM NQATSCDLKELVRKFIPE IGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPA+EVVE ATEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA

A0A6J1KJB0 40S ribosomal protein S3a

4.5e-141

99.23

Show/hide

Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFN+KNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIM NQATSCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA

A0A6J1KYM2 40S ribosomal protein S3a

8.5e-140

98.46

Show/hide

Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFN+KNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIM NQATSCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPA+EVVE ATEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA

SwissProt top hits

e value

%identity

Alignment

A5B4K1 40S ribosomal protein S3a-1

3.6e-127

87.74

Show/hide

Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKK  DPFAKKDWYDIKAPSVF ++NVGKTLV+RTQGTKIASEGLKHRVFE+SLADLQ DE+ AYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA
        WGM+FTTDKLRSLVRKW TLIEAHVDVKTTD+YTLR+FCI FTK+R NQ K+TCYAQSSQIRQIRRKMREIM N ATSCDLKELV+KFIPESIG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADE-VVEEATEVVGA
        TSSIYPLQNV+IRKVKILKAPKFDLGKLMEVHGDYSEDVG K++RPADE V E  TEV+GA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADE-VVEEATEVVGA

P33444 40S ribosomal protein S3a

7.2e-128

86.97

Show/hide

Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKK  DPFAKKDWYDIKAPSVF+++NVGKTLVTRTQGTKIASEGL+HRVFE+SLADLQ DE+H++RKIRLRAED+QG+NVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA
        WGM+FTTDKLRSLVRKW +LIEAHVDVKTTDSYTLRMFCIGFTK+R NQ KRTCYAQSSQIRQIRRKMREIM NQA SCDLK+LV+KFIPESIG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-DVGVKVDRPADEVVEEATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY+E D+G K+DRPA+E V E TEV+GA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-DVGVKVDRPADEVVEEATEVVGA

P49198 40S ribosomal protein S3a

1.6e-127

86.92

Show/hide

Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKK  DPF+KKDWYDIKAPS+F  +NVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQ+DE+H+YRKIRLRAEDVQG+NVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA
        WGM+ TTDKLRSLV+KW +LIEAHVDVKTTD++TLRMFCIGFTK+R NQVKRTCYAQSSQI+QIRRKMREIM  QA +CDLKELV+KFIPESIG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFD+GKLMEVHGDYSEDVGVK+DRPA+E   EATEV+GA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA

Q285L8 40S ribosomal protein S3a

6.1e-127

88.12

Show/hide

Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKK  DP+AKKDWYDIKAPSVF+IKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQ DE+ ++RKIRLRAEDVQG+NVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA
        WGM+FTTDKLRSLV+KW TLIEAHVDVKTTDSYTLRMFCI FTK+RPNQ KRTCYAQSSQIRQIRRKM EIM NQA+SCDLKELV KFIPESIG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEA-TEVVGA
        TSSI+PLQNV+IRKVKILKAPKFD+GKLMEVHGDYSEDVGVK+DRPADE V EA  E+ GA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEA-TEVVGA

Q8GTE3 40S ribosomal protein S3a

1.4e-128

89.27

Show/hide

Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKK  DPF+KKDWYDIKAPSVF +KNVGKTLV+RTQGTKIASEGLKHRVFE+SLADLQ DE++A+RKIRLRAEDVQG+NVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA
        +GM+FTTDKLRSLVRKW TLIEAHVDVKTTD+YTLRMFCIGFTKRR NQVKRTCYAQSSQIRQIRRKMREIM NQATSCDLKELVRKFIPE IGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEAT-EVVGA
        TSSIYPLQNVFIRKVKILK+PKFDLGKLMEVHGDYSEDVG KV+ PADE V E T E+VGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEAT-EVVGA

Arabidopsis top hits

e value

%identity

Alignment

AT3G04840.1 Ribosomal protein S3Ae

4.5e-125

85.5

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Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKG+KGGKKK VDPF+KKDWYD+KAPS+F  +NVGKTLV+RTQGTKIASEGLKHRVFEVSLADLQ DE++AYRKIRLRAEDVQGRNVL  F
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA
        WGM+FTTDKLRSLV+KW TLIEAHVDVKTTDSYTLR+FCI FTKRR NQVKRTCYAQSSQIRQIRRKMR+IM  +A+SCDLK+LV KFIPE+IG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEV-VEEATEVVGA
        T  IYPLQNVFIRKVKILKAPKFDLGKLM+VHGDYS EDVGVKVDRPADE+ VEE TE++GA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEV-VEEATEVVGA

AT4G34670.1 Ribosomal protein S3Ae

7.6e-125

85.88

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Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKG+KGGKKK VDPF+KKDWYD+KAP  F  +NVGKTLV+RTQGTKIASEGLKHRVFEVSLADLQ+DE++AYRKIRLRAEDVQGRNVLT F
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA
        WGM+FTTDKLRSLV+KW TLIEAHVDVKTTD YTLRMFCI FTKRR NQVKRTCYAQSSQIRQIRRKM EIM  +A+SCDLKELV KFIPE+IG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADE-VVEEATEVVGA
        T  IYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY +EDVGVKVDRPADE +VEE TE++GA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADE-VVEEATEVVGA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTGTCGGAAAGAACAAGAGGATTTCCAAAGGCAAGAAGGGAGGCAAGAAGAAGACCGTTGACCCATTTGCCAAGAAGGACTGGTATGATATCAAGGCTCCTTCTGT
GTTCAATATTAAGAACGTTGGGAAGACTCTTGTTACTCGTACGCAGGGTACTAAGATTGCTTCTGAGGGACTTAAACATAGAGTGTTTGAGGTATCACTGGCTGACCTTC
AGGATGATGAGGAGCATGCCTACAGAAAGATTAGACTGAGGGCTGAGGATGTTCAAGGAAGAAATGTTCTGACTAATTTCTGGGGAATGAATTTTACTACTGATAAATTG
AGGTCATTGGTAAGGAAATGGCATACATTGATTGAAGCTCATGTAGATGTTAAGACCACTGACAGTTATACACTGAGGATGTTTTGTATTGGATTCACTAAGAGACGCCC
AAACCAGGTCAAGAGGACCTGTTATGCTCAATCCAGTCAGATTCGACAGATCCGCCGTAAGATGAGGGAGATCATGGCCAACCAGGCAACATCATGTGATCTGAAAGAGT
TGGTCCGTAAGTTTATTCCTGAATCAATTGGAAAGGAAATCGAGAAGGCAACATCAAGCATATACCCTCTACAAAATGTTTTCATTCGCAAGGTCAAGATCTTGAAAGCC
CCCAAGTTCGATCTTGGAAAGTTGATGGAGGTTCATGGTGATTATTCGGAAGATGTTGGTGTGAAGGTAGATAGGCCTGCTGATGAAGTTGTAGAGGAGGCTACAGAAGT
TGTTGGGGCTTGA

mRNA sequence

Show/hide mRNA sequence

TTTCCTTATTCTAATTTCGAATTCGTATCGTTGAAAACTCCCAAATCAAATTCCCACAATCAAACTCTACACTTTTTATATTTACCAAACAACAATTTTCAAATCCAAAG
TGCAAACCAAAGAAGGCGTAAAGGGTAAATTTGTAACTTAGAACAAACAACAGCTTCCCACAAAAGAAGAAGCGGAGGAGCTATTTAAGGAGACGAAATTAGGGTTTTTG
GCGCAGCCGTTTATCTCTTCTGCTCAAAGCTTCTGTACTGCTCCAACCATGGCTGTCGGAAAGAACAAGAGGATTTCCAAAGGCAAGAAGGGAGGCAAGAAGAAGACCGT
TGACCCATTTGCCAAGAAGGACTGGTATGATATCAAGGCTCCTTCTGTGTTCAATATTAAGAACGTTGGGAAGACTCTTGTTACTCGTACGCAGGGTACTAAGATTGCTT
CTGAGGGACTTAAACATAGAGTGTTTGAGGTATCACTGGCTGACCTTCAGGATGATGAGGAGCATGCCTACAGAAAGATTAGACTGAGGGCTGAGGATGTTCAAGGAAGA
AATGTTCTGACTAATTTCTGGGGAATGAATTTTACTACTGATAAATTGAGGTCATTGGTAAGGAAATGGCATACATTGATTGAAGCTCATGTAGATGTTAAGACCACTGA
CAGTTATACACTGAGGATGTTTTGTATTGGATTCACTAAGAGACGCCCAAACCAGGTCAAGAGGACCTGTTATGCTCAATCCAGTCAGATTCGACAGATCCGCCGTAAGA
TGAGGGAGATCATGGCCAACCAGGCAACATCATGTGATCTGAAAGAGTTGGTCCGTAAGTTTATTCCTGAATCAATTGGAAAGGAAATCGAGAAGGCAACATCAAGCATA
TACCCTCTACAAAATGTTTTCATTCGCAAGGTCAAGATCTTGAAAGCCCCCAAGTTCGATCTTGGAAAGTTGATGGAGGTTCATGGTGATTATTCGGAAGATGTTGGTGT
GAAGGTAGATAGGCCTGCTGATGAAGTTGTAGAGGAGGCTACAGAAGTTGTTGGGGCTTGAAAATGGAGTATTGAATCAACGTTTGGTATTTACAATTGAACTGTGGCCT
TTTTGTTCTTATTTTTACCTTTATTTTTTAGTGTTATAGTTGTATGTTTCTGGCAGGTTGAGAAATCAGAGATAAACAGCGATTTTGACTATGAAAAACTTGCTGCTTTT
AAATTATCATTCCTTGGAAACATTTGAATACGCACTCGACTAGTGTCAAGTTTGCATCGAGTTGCCATTTTTACTCTCAACTATGAGGTCTCGTAGAATTTTGTTTTCCT
TTTCTAACTAAAAGTTTTATTGTGATTTTAGAAAATTCAGATTCTCAACATAATTTGCAGCTTTTGTCCCCATTTCGTGTTCCACATTCAACTGTATTGTTTAGGTCTCT
TTCATCTTTAATGAGGTGATGGCTCTATCGCCCTTTTTCTGCAATCCCTTTGCAATATGGCCTTTGATTACTCTATTAGATTTCGACTTGGTCAATAATGTGT

Protein sequence

Show/hide protein sequence

MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKL
RSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKA
PKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA

Sed0022581 (gene) of Chayote v1 genome