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Sed0022591 (gene) of Chayote v1 genome

Gene IDSed0022591
OrganismSechium edule (Chayote v1)
DescriptionSmall ubiquitin-related modifier
Genome locationLG05:41871504..41874650
RNA-Seq ExpressionSed0022591
SyntenySed0022591
Gene Ontology termsGO:0016925 - protein sumoylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0031386 - protein tag (molecular function)
GO:0044389 - ubiquitin-like protein ligase binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR022617 - Rad60/SUMO-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570548.1 Tyrosine-protein phosphatase DSP1, partial [Cucurbita argyrosperma subsp. sororia]1.9e-4697.98Show/hide
Query:  MSGVTNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST
        MSGVTN QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+
Subjt:  MSGVTNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST

XP_004150752.1 small ubiquitin-related modifier 1 [Cucumis sativus]1.4e-4799Show/hide
Query:  MSGVTNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR
        MSGVTN QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR
Subjt:  MSGVTNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR

XP_008456407.1 PREDICTED: small ubiquitin-related modifier 1 [Cucumis melo]3.9e-4798Show/hide
Query:  MSGVTNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR
        MSGVTN QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+R
Subjt:  MSGVTNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR

XP_022943304.1 small ubiquitin-related modifier 1 [Cucurbita moschata]1.9e-4697.98Show/hide
Query:  MSGVTNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST
        MSGVTN QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+
Subjt:  MSGVTNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST

XP_022970791.1 small ubiquitin-related modifier 1-like [Cucurbita maxima]2.5e-4697.98Show/hide
Query:  MSGVTNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST
        MSGV N QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST
Subjt:  MSGVTNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST

TrEMBL top hitse value%identityAlignment
A0A0A0KDV8 Small ubiquitin-related modifier6.5e-4899Show/hide
Query:  MSGVTNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR
        MSGVTN QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR
Subjt:  MSGVTNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR

A0A1S3C3V0 Small ubiquitin-related modifier1.9e-4798Show/hide
Query:  MSGVTNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR
        MSGVTN QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+R
Subjt:  MSGVTNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR

A0A5A7UHK7 Small ubiquitin-related modifier1.9e-4798Show/hide
Query:  MSGVTNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR
        MSGVTN QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+R
Subjt:  MSGVTNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR

A0A6J1FTW7 Small ubiquitin-related modifier9.4e-4797.98Show/hide
Query:  MSGVTNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST
        MSGVTN QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+
Subjt:  MSGVTNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST

A0A6J1JFC9 Small ubiquitin-related modifier9.4e-4797.98Show/hide
Query:  MSGVTNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST
        MSGVTN QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+
Subjt:  MSGVTNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST

SwissProt top hitse value%identityAlignment
O13351 Ubiquitin-like protein pmt3/smt33.1e-2355.79Show/hide
Query:  TNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST
        T    ++D KP+ +  HINLKV GQD NEVFF+IK++T+  KLM  YC RQ   +NS+ FL DG R+R +QTP EL+MEDGD+I+A+L Q GG T
Subjt:  TNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST

P55852 Small ubiquitin-related modifier 14.7e-4392.47Show/hide
Query:  NAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS
        +A QEEDKKP D  AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFLFDGRRLRAEQTPDEL+MEDGDEIDAMLHQTGGS
Subjt:  NAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS

P55857 Small ubiquitin-related modifier 19.1e-3986.32Show/hide
Query:  NAQQEEDKKP---NDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG
        +A  EEDKKP       AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+N+IAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGG
Subjt:  NAQQEEDKKP---NDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG

Q9FLP5 Small ubiquitin-related modifier 37.3e-2055.06Show/hide
Query:  EDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG
        +D KP D  Q AH+ LKVK QDG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G R+   +TPDEL+MEDGD IDA    +GG
Subjt:  EDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG

Q9FLP6 Small ubiquitin-related modifier 21.2e-4190.53Show/hide
Query:  NAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR
        +A  EEDKKP DQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG  +
Subjt:  NAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR

Arabidopsis top hitse value%identityAlignment
AT4G26840.1 small ubiquitin-like modifier 13.3e-4492.47Show/hide
Query:  NAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS
        +A QEEDKKP D  AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFLFDGRRLRAEQTPDEL+MEDGDEIDAMLHQTGGS
Subjt:  NAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS

AT5G55160.1 small ubiquitin-like modifier 28.2e-4390.53Show/hide
Query:  NAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR
        +A  EEDKKP DQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG  +
Subjt:  NAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR

AT5G55160.2 small ubiquitin-like modifier 25.0e-4079.63Show/hide
Query:  NAQQEEDKKPNDQSAHINLKVKGQ-------------DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAML
        +A  EEDKKP DQ AHINLKVKGQ             DGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGRRLRAEQTPDELEMEDGDEIDAML
Subjt:  NAQQEEDKKPNDQSAHINLKVKGQ-------------DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAML

Query:  HQTGGSTR
        HQTGG  +
Subjt:  HQTGGSTR

AT5G55170.1 small ubiquitin-like modifier 35.2e-2155.06Show/hide
Query:  EDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG
        +D KP D  Q AH+ LKVK QDG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G R+   +TPDEL+MEDGD IDA    +GG
Subjt:  EDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG

AT5G55856.1 Ubiquitin-like superfamily protein7.4e-2052.33Show/hide
Query:  DKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG
        DKKP   S+HI +KVK QD   V+FRIKR  +L+K+M+AY D+  V+++++ FLFDG R++  QTP+EL +ED DEI+A   Q GG
Subjt:  DKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGGGGTTACGAACGCGCAGCAGGAGGAAGACAAGAAGCCCAACGATCAATCGGCGCATATCAACCTCAAGGTCAAAGGCCAGGATGGAAATGAGGTATTCTTCAG
GATTAAAAGGAGCACCCAGCTGAAGAAACTGATGAATGCTTACTGTGATCGACAATCTGTGGATCTGAACTCCATTGCATTTCTATTCGATGGCCGTCGTCTTCGTGCCG
AGCAAACTCCGGACGAGCTAGAGATGGAGGATGGGGACGAGATTGATGCAATGTTGCACCAGACCGGTGGATCTACTCGTTGA
mRNA sequenceShow/hide mRNA sequence
TGATTTTGGGTTTTGAAAAAGTAATCCGTCATTTTGATTTGACGAAGCGGAAACGAGAAGTGTTGAACCCTAAAAGCAGTGAAGGGGTTGAGGAAATGTCGGGGGTTACG
AACGCGCAGCAGGAGGAAGACAAGAAGCCCAACGATCAATCGGCGCATATCAACCTCAAGGTCAAAGGCCAGGATGGAAATGAGGTATTCTTCAGGATTAAAAGGAGCAC
CCAGCTGAAGAAACTGATGAATGCTTACTGTGATCGACAATCTGTGGATCTGAACTCCATTGCATTTCTATTCGATGGCCGTCGTCTTCGTGCCGAGCAAACTCCGGACG
AGCTAGAGATGGAGGATGGGGACGAGATTGATGCAATGTTGCACCAGACCGGTGGATCTACTCGTTGAAATACATGCTGCTGATTCTGTTCGTTAAGAAACGAATATTTT
TGTTTGAATTGGAATATATCGATCATTTAGAATCTTGCAGGGGTTTATTAGGTTTGTAGATTTGCTAAATACTTCCCTAAGTAGTTATCTGAATTGTGAAGACTTCCCTT
TGACTGGTTGAAGGGAGATGGTGTCTAGTTTAAGCTTTATTTTGAGGTCGATATTACCTTTTCGTATCGATTATTAATTGGTTCTCTGTTTGGATTGAAAAGCCTCCCCA
CGAAGCATTAGTATTAGTATATAGTTTGACAGTTCATTAAAATGTACCACTATGGTTTCCTTCTTTACGTTGTGATCTTTCTTATAACAAAATGGTAGACGATATTAAAA
TTATGATATGCATACATAGATGTAAAATACTTTGTGAGGTTTATTTTAGAATGATTTGGAATCGGTTGGATTTCAATATTTAGACGGATT
Protein sequenceShow/hide protein sequence
MSGVTNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR