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Sed0022624 (gene) of Chayote v1 genome

Gene IDSed0022624
OrganismSechium edule (Chayote v1)
Description40S ribosomal protein S25
Genome locationLG06:43933485..43935885
RNA-Seq ExpressionSed0022624
SyntenySed0022624
Gene Ontology termsGO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR004977 - Ribosomal protein S25


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PNX77806.1 40S ribosomal protein s25-2-like [Trifolium pratense]3.6e-4694.44Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE
        MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL EAPKYKLITPS+LSDR+RINGSLARRAIK+LMARGLIR+VSAHASQ+
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

TQE04382.1 hypothetical protein C1H46_010001 [Malus baccata]2.7e-4695.37Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE
        MAPKK+KAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL EAPKYKLITPSILSDR+RINGSLARRAI+ELMARGLIRMVSAHASQ+
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

XP_008344584.1 40S ribosomal protein S25-2 [Malus domestica]2.7e-4695.37Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE
        MAPKK+KAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL EAPKYKLITPSILSDR+RINGSLARRAI+ELMARGLIRMVSAHASQ+
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

XP_016900931.1 PREDICTED: 40S ribosomal protein S25-2-like [Cucumis melo]1.6e-4695.37Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE
        MAPKK+KAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVE PKYKL+TPSILSDR+RINGSLARRAIK+LMARGLIRMVSAHASQE
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

XP_022150617.1 40S ribosomal protein S25-2-like [Momordica charantia]3.6e-4694.44Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE
        MAPKK+KAPPP+SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVE PKYKL+TPSILSDR+RINGSLARRAIK+LMARGLIRMVSAHASQE
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

TrEMBL top hitse value%identityAlignment
A0A1S4DY71 40S ribosomal protein S257.8e-4795.37Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE
        MAPKK+KAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVE PKYKL+TPSILSDR+RINGSLARRAIK+LMARGLIRMVSAHASQE
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

A0A2K3LH00 40S ribosomal protein S251.7e-4694.44Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE
        MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL EAPKYKLITPS+LSDR+RINGSLARRAIK+LMARGLIR+VSAHASQ+
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

A0A2Z6LSP4 40S ribosomal protein S251.7e-4694.44Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE
        MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL EAPKYKLITPS+LSDR+RINGSLARRAIK+LMARGLIR+VSAHASQ+
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

A0A540N013 Uncharacterized protein1.3e-4695.37Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE
        MAPKK+KAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL EAPKYKLITPSILSDR+RINGSLARRAI+ELMARGLIRMVSAHASQ+
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

A0A5D3CG38 40S ribosomal protein S257.8e-4795.37Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE
        MAPKK+KAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVE PKYKL+TPSILSDR+RINGSLARRAIK+LMARGLIRMVSAHASQE
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

SwissProt top hitse value%identityAlignment
P46301 40S ribosomal protein S257.0e-4587.96Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE
        MAPKK +APPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFD+ TYDKLL EAPKYKLITPS+LSDR+RI+GSLAR+AI++LMARG IRMVSAHASQ+
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

Q8GYL5 40S ribosomal protein S25-37.0e-4588.79Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE
        MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL EAPK+KLITPSILSDR+RINGSLARRAI+ELMA+G IRMVSAH+SQ+
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE

Query:  IYTRATN
        IYTRAT+
Subjt:  IYTRATN

Q9SIK2 40S ribosomal protein S25-26.8e-4892.59Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE
        MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL EAPK+KLITPSILSDRMRINGSLARRAI+ELMA+GLIRMVSAH+SQ+
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

Q9SIW5 40S ribosomal protein S25-17.3e-4283.96Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE
        MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKL+ EAPK+KLITPSILSDR+RINGSLAR+AI++LM +G IRMVS H+SQ+
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE

Query:  IYTRAT
        I TRAT
Subjt:  IYTRAT

Q9T029 40S ribosomal protein S25-41.7e-4689.81Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE
        MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL EAPK+KLITPSILSDRMRINGSLARRAI+ELMA+G+IRMV+AH+SQ+
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

Arabidopsis top hitse value%identityAlignment
AT2G21580.1 Ribosomal protein S25 family protein4.8e-4992.59Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE
        MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL EAPK+KLITPSILSDRMRINGSLARRAI+ELMA+GLIRMVSAH+SQ+
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

AT2G21580.2 Ribosomal protein S25 family protein3.5e-4791.67Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE
        MAPKK+K PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQGTYDKLL EAPK+KLITPSILSDRMRINGSLARRAI+ELMA+GLIRMVSAH+SQ+
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

AT4G34555.1 Ribosomal protein S25 family protein5.0e-4688.79Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE
        MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL EAPK+KLITPSILSDR+RINGSLARRAI+ELMA+G IRMVSAH+SQ+
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE

Query:  IYTRATN
        IYTRAT+
Subjt:  IYTRATN

AT4G39200.1 Ribosomal protein S25 family protein1.2e-4789.81Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE
        MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL EAPK+KLITPSILSDRMRINGSLARRAI+ELMA+G+IRMV+AH+SQ+
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

AT4G39200.2 Ribosomal protein S25 family protein8.5e-4688.89Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE
        MAPKK+K PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQ TYDKLL EAPK+KLITPSILSDRMRINGSLARRAI+ELMA+G+IRMV+AH+SQ+
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQE

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCCGAAGAAGGAAAAGGCTCCTCCACCGTCCTCGAAGCCTGCCAAATCTGGCGGAGGAAAGCAGAAGAAGAAGAAGTGGAGCAAGGGAAAACAAAAGGAGAAGGT
CAACAACATGGTTTTGTTTGATCAAGGAACTTATGACAAGCTTCTAGTTGAAGCTCCCAAGTACAAGCTTATCACTCCTTCAATCTTGTCCGATAGAATGAGGATCAATG
GATCTCTAGCTCGAAGAGCAATCAAGGAACTGATGGCCCGAGGTCTCATCCGAATGGTCTCTGCACACGCCAGCCAAGAGATCTACACAAGGGCCACCAATACCTAA
mRNA sequenceShow/hide mRNA sequence
CAAGAACAGTTAAGTTTTAGGGTTTATTTTCCCATCGTCCAAAGTTGTCTCTTCCACAGCACTTTCATCAGCACAGCCAATTCAGAAACCGACGGCGGTGGAACTTTGAT
ACAATGGCGCCGAAGAAGGAAAAGGCTCCTCCACCGTCCTCGAAGCCTGCCAAATCTGGCGGAGGAAAGCAGAAGAAGAAGAAGTGGAGCAAGGGAAAACAAAAGGAGAA
GGTCAACAACATGGTTTTGTTTGATCAAGGAACTTATGACAAGCTTCTAGTTGAAGCTCCCAAGTACAAGCTTATCACTCCTTCAATCTTGTCCGATAGAATGAGGATCA
ATGGATCTCTAGCTCGAAGAGCAATCAAGGAACTGATGGCCCGAGGTCTCATCCGAATGGTCTCTGCACACGCCAGCCAAGAGATCTACACAAGGGCCACCAATACCTAA
TTCTCTTTCTCATCATTAGACTTCTTGTTTTTGCTTGTTGGTTTCTGTCTCTTCACATGAATGCTACAATTTTGCTATTTCTCTTTTAGTTTTTCTCTTTTGGTGAGGCA
ATAACTGATTTTCTTGTTAATTACTGGCTTTATATTTATCAAGTTTCTCAGATATTCAATAGTTCATCATGTTTTCTTTTAAAGTAAGTTCACATCAGTTGGCTAGTGTT
GGATGTTAGGTCTAACAAATCATTTATGATGGTATTCGTAGCTTGTTGGTTGAGGCTCGAGATCTTTAAAGTATTTTTTTAGAGGTTTTAGGTTTTTAATCTACTAATGA
ACTGTATTGTAATGTTCTATATTATCTTCTGGATTTGAACCTTAGACGGGC
Protein sequenceShow/hide protein sequence
MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEAPKYKLITPSILSDRMRINGSLARRAIKELMARGLIRMVSAHASQEIYTRATNT