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Sed0022625 (gene) of Chayote v1 genome

Gene IDSed0022625
OrganismSechium edule (Chayote v1)
Descriptionmitochondrial import inner membrane translocase subunit Tim9
Genome locationLG04:26665902..26668326
RNA-Seq ExpressionSed0022625
SyntenySed0022625
Gene Ontology termsNA
InterPro domainsIPR004217 - Tim10-like
IPR035427 - Tim10-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON38573.1 Tim10/DDP family zinc finger [Parasponia andersonii]4.3e-4091.4Show/hide
Query:  MDKGMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDK MLADL+ LPEEDKL+M+TMIDQLQIRDSLRMYNSLVERCF DC+D FQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKGMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

XP_004137789.1 mitochondrial import inner membrane translocase subunit Tim9 [Cucumis sativus]3.5e-4294.62Show/hide
Query:  MDKGMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDK MLADL+GLPEEDK+KMATMIDQLQIRDSLRMYNSLVERCF DC+DNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKGMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

XP_022145535.1 mitochondrial import inner membrane translocase subunit Tim9-like [Momordica charantia]1.3e-4193.55Show/hide
Query:  MDKGMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDK MLADL+GLP+EDKLKMA+MIDQLQIRDSLRMYNSLVERCF DC+DNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKGMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

XP_022934857.1 mitochondrial import inner membrane translocase subunit Tim9 [Cucurbita moschata]3.2e-4397.85Show/hide
Query:  MDKGMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDK MLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADC+DNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKGMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

XP_042940042.1 mitochondrial import inner membrane translocase subunit Tim9 [Carya illinoinensis]1.3e-3990.32Show/hide
Query:  MDKGMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDK MLADLE LPEEDK++M+TMI+QLQIRDSLRMYNSLVERCF DCVD FQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAAT+D
Subjt:  MDKGMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

TrEMBL top hitse value%identityAlignment
A0A0A0LFK3 zf-Tim10_DDP domain-containing protein1.7e-4294.62Show/hide
Query:  MDKGMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDK MLADL+GLPEEDK+KMATMIDQLQIRDSLRMYNSLVERCF DC+DNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKGMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

A0A1S3B5G6 mitochondrial import inner membrane translocase subunit Tim91.7e-4294.62Show/hide
Query:  MDKGMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDK MLADL+GLPEEDK+KMATMIDQLQIRDSLRMYNSLVERCF DC+DNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKGMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

A0A5D3DN53 Mitochondrial import inner membrane translocase subunit Tim91.7e-4294.62Show/hide
Query:  MDKGMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDK MLADL+GLPEEDK+KMATMIDQLQIRDSLRMYNSLVERCF DC+DNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKGMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

A0A6J1F3Y8 mitochondrial import inner membrane translocase subunit Tim91.5e-4397.85Show/hide
Query:  MDKGMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDK MLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADC+DNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKGMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

A0A6J1IZ98 mitochondrial import inner membrane translocase subunit Tim91.5e-4397.85Show/hide
Query:  MDKGMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDK MLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADC+DNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKGMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

SwissProt top hitse value%identityAlignment
P57745 Mitochondrial import inner membrane translocase subunit Tim97.0e-1747.44Show/hide
Query:  LEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELN
        ++ L   ++ + + +I+  Q++D +R+Y++LVERCF DCV++F    LT +E+TC+ RC+EKFLKHS RVG+RF E N
Subjt:  LEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELN

Q757S0 Mitochondrial import inner membrane translocase subunit TIM95.3e-1747.44Show/hide
Query:  LEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELN
        ++ L   ++ +   +++Q Q++D +R+Y++LVERCF+DCV++F    LT +E+TC+ RC+EKFLKHS RVG RF E N
Subjt:  LEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELN

Q9XGX7 Mitochondrial import inner membrane translocase subunit Tim95.9e-4083.87Show/hide
Query:  MDKGMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDK ML DL+GLPEEDK++MA M+DQLQIRDSLRMYNSLVERCF DCVD F+RK+L KQEE+CVRRCAEKFLKHSMRVGMRFAELNQG AT D
Subjt:  MDKGMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

Q9XGX8 Mitochondrial import inner membrane translocase subunit Tim97.7e-4083.87Show/hide
Query:  MDKGMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDK ML DL+ LPEEDKLKMA+MI+QLQIRDSLRMYN+LVERCF DCVD+F+RK+L KQEETCV+RCAEKFLKHSMRVG+RFAELNQGAAT+D
Subjt:  MDKGMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

Q9XGX9 Mitochondrial import inner membrane translocase subunit TIM91.2e-3781.72Show/hide
Query:  MDKGMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MD  M+A L+GLPEEDK KMA+MIDQLQ+RDSLRMYNSLVERCF DCVD+F RKSL KQEETCV RCAEKFLKH+MRVGMRFAELNQ A T D
Subjt:  MDKGMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

Arabidopsis top hitse value%identityAlignment
AT3G46560.1 Tim10/DDP family zinc finger protein8.7e-3981.72Show/hide
Query:  MDKGMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MD  M+A L+GLPEEDK KMA+MIDQLQ+RDSLRMYNSLVERCF DCVD+F RKSL KQEETCV RCAEKFLKH+MRVGMRFAELNQ A T D
Subjt:  MDKGMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAAGGCATGCTTGCTGATTTGGAGGGTCTTCCCGAAGAAGACAAGCTCAAAATGGCCACCATGATCGACCAGCTCCAGATCCGAGACAGTCTGAGAATGTACAA
CTCATTGGTGGAGAGATGCTTTGCCGATTGTGTAGACAACTTTCAGCGAAAATCCTTAACCAAGCAAGAAGAAACATGTGTACGTAGGTGTGCCGAGAAGTTTTTGAAGC
ACTCGATGCGTGTCGGCATGAGATTTGCTGAGCTCAACCAAGGAGCTGCTACCTCAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACAAAGGCATGCTTGCTGATTTGGAGGGTCTTCCCGAAGAAGACAAGCTCAAAATGGCCACCATGATCGACCAGCTCCAGATCCGAGACAGTCTGAGAATGTACAA
CTCATTGGTGGAGAGATGCTTTGCCGATTGTGTAGACAACTTTCAGCGAAAATCCTTAACCAAGCAAGAAGAAACATGTGTACGTAGGTGTGCCGAGAAGTTTTTGAAGC
ACTCGATGCGTGTCGGCATGAGATTTGCTGAGCTCAACCAAGGAGCTGCTACCTCAGATTGA
Protein sequenceShow/hide protein sequence
MDKGMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCVDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD