CuGenDBv2

Gene ID	Sed0022631
Organism	Sechium edule (Chayote v1)
Description	NADH-ubiquinone reductase complex 1 MLRQ subunit
Genome location	LG01:12253796..12255623
RNA-Seq Expression	Sed0022631
Synteny	Sed0022631
Gene Ontology terms	GO:0000380 - alternative mRNA splicing, via spliceosome (biological process) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR010530 - NADH-ubiquinone reductase complex 1 MLRQ subunit

Homology

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GenBank top hits

e value

%identity

Alignment

KAB1202424.1 hypothetical protein CJ030_MR8G019496 [Morella rubra]

2.6e-37

83.52

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Query:  MAHSSTSRWIRPEVYPLFAAMGVAVGICGFQLVRNICINPEVRVNKQNRAAGVLENFAEGEKYTEHFLRKFVRNRPTEIMPSINKFFTDPN
        MA S+ +RW+RPEVYPLFAA+GVAVGICG QLVRNICINPEVRVNK++RAAGVL+NFAEGEKYTEHFLRKFVRN+  EIMPSIN FFTDP+
Subjt:  MAHSSTSRWIRPEVYPLFAAMGVAVGICGFQLVRNICINPEVRVNKQNRAAGVLENFAEGEKYTEHFLRKFVRNRPTEIMPSINKFFTDPN

KAE8124153.1 hypothetical protein FH972_019061 [Carpinus fangiana]

2.3e-38

84.62

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Query:  MAHSSTSRWIRPEVYPLFAAMGVAVGICGFQLVRNICINPEVRVNKQNRAAGVLENFAEGEKYTEHFLRKFVRNRPTEIMPSINKFFTDPN
        MA S+TSRW+RPEVYPLFAA+GVAVGICGFQL+RNICINPEVRVNK++RAAGVL+NFAEGEKY+EHFLRKFVRN+  EIMPSIN FFTDP+
Subjt:  MAHSSTSRWIRPEVYPLFAAMGVAVGICGFQLVRNICINPEVRVNKQNRAAGVLENFAEGEKYTEHFLRKFVRNRPTEIMPSINKFFTDPN

PON47590.1 NADH-ubiquinone reductase complex 1 MLRQ subunit [Parasponia andersonii]

5.2e-38

84.62

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Query:  MAHSSTSRWIRPEVYPLFAAMGVAVGICGFQLVRNICINPEVRVNKQNRAAGVLENFAEGEKYTEHFLRKFVRNRPTEIMPSINKFFTDPN
        MA SS S+W+RPEVYPLFAA+GVAVGICGFQLVRNICINPEVRV+K+ RAAGVL+NFAEGEKY+EHFLRK+VRNR  EIMPSIN+FFTDPN
Subjt:  MAHSSTSRWIRPEVYPLFAAMGVAVGICGFQLVRNICINPEVRVNKQNRAAGVLENFAEGEKYTEHFLRKFVRNRPTEIMPSINKFFTDPN

XP_022924187.1 uncharacterized protein LOC111431708 [Cucurbita moschata]

8.8e-38

84.62

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Query:  MAHSSTSRWIRPEVYPLFAAMGVAVGICGFQLVRNICINPEVRVNKQNRAAGVLENFAEGEKYTEHFLRKFVRNRPTEIMPSINKFFTDPN
        MA S+ +RW+RPEVYPLFAA+GVAVGICGFQLVRNICINPEVRV K+NRAAGVL+NFAEGEKYTEHFLRKFVRN+  EIMPSIN FFTDP+
Subjt:  MAHSSTSRWIRPEVYPLFAAMGVAVGICGFQLVRNICINPEVRVNKQNRAAGVLENFAEGEKYTEHFLRKFVRNRPTEIMPSINKFFTDPN

XP_030459805.1 uncharacterized protein LOC115680190 [Syzygium oleosum]

2.6e-37

82.42

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Query:  MAHSSTSRWIRPEVYPLFAAMGVAVGICGFQLVRNICINPEVRVNKQNRAAGVLENFAEGEKYTEHFLRKFVRNRPTEIMPSINKFFTDPN
        MA S+ SRWIRPEVYPLFAA+GVAVGICG QL+RNIC NPEVRV K+NRAAGVL+NFAEGEKY++H +RKFVRNRP+EIMPSINKFF+DPN
Subjt:  MAHSSTSRWIRPEVYPLFAAMGVAVGICGFQLVRNICINPEVRVNKQNRAAGVLENFAEGEKYTEHFLRKFVRNRPTEIMPSINKFFTDPN

TrEMBL top hits

e value

%identity

Alignment

A0A2P5BFM4 NADH-ubiquinone reductase complex 1 MLRQ subunit

2.5e-38

84.62

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Query:  MAHSSTSRWIRPEVYPLFAAMGVAVGICGFQLVRNICINPEVRVNKQNRAAGVLENFAEGEKYTEHFLRKFVRNRPTEIMPSINKFFTDPN
        MA SS S+W+RPEVYPLFAA+GVAVGICGFQLVRNICINPEVRV+K+ RAAGVL+NFAEGEKY+EHFLRK+VRNR  EIMPSIN+FFTDPN
Subjt:  MAHSSTSRWIRPEVYPLFAAMGVAVGICGFQLVRNICINPEVRVNKQNRAAGVLENFAEGEKYTEHFLRKFVRNRPTEIMPSINKFFTDPN

A0A2P5EKK3 NADH-ubiquinone reductase complex 1 MLRQ subunit

2.5e-38

84.62

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Query:  MAHSSTSRWIRPEVYPLFAAMGVAVGICGFQLVRNICINPEVRVNKQNRAAGVLENFAEGEKYTEHFLRKFVRNRPTEIMPSINKFFTDPN
        MA SS S+W+RPEVYPLFAA+GVAVGICGFQLVRNICINPEVRV+K+ RAAGVL+NFAEGEKY+EHFLRK+VRNR  EIMPSIN+FFTDPN
Subjt:  MAHSSTSRWIRPEVYPLFAAMGVAVGICGFQLVRNICINPEVRVNKQNRAAGVLENFAEGEKYTEHFLRKFVRNRPTEIMPSINKFFTDPN

A0A5N6RSH4 Uncharacterized protein

1.1e-38

84.62

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Query:  MAHSSTSRWIRPEVYPLFAAMGVAVGICGFQLVRNICINPEVRVNKQNRAAGVLENFAEGEKYTEHFLRKFVRNRPTEIMPSINKFFTDPN
        MA S+TSRW+RPEVYPLFAA+GVAVGICGFQL+RNICINPEVRVNK++RAAGVL+NFAEGEKY+EHFLRKFVRN+  EIMPSIN FFTDP+
Subjt:  MAHSSTSRWIRPEVYPLFAAMGVAVGICGFQLVRNICINPEVRVNKQNRAAGVLENFAEGEKYTEHFLRKFVRNRPTEIMPSINKFFTDPN

A0A6A1UPJ0 Uncharacterized protein

1.2e-37

83.52

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Query:  MAHSSTSRWIRPEVYPLFAAMGVAVGICGFQLVRNICINPEVRVNKQNRAAGVLENFAEGEKYTEHFLRKFVRNRPTEIMPSINKFFTDPN
        MA S+ +RW+RPEVYPLFAA+GVAVGICG QLVRNICINPEVRVNK++RAAGVL+NFAEGEKYTEHFLRKFVRN+  EIMPSIN FFTDP+
Subjt:  MAHSSTSRWIRPEVYPLFAAMGVAVGICGFQLVRNICINPEVRVNKQNRAAGVLENFAEGEKYTEHFLRKFVRNRPTEIMPSINKFFTDPN

A0A6J1E888 uncharacterized protein LOC111431708

4.3e-38

84.62

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Query:  MAHSSTSRWIRPEVYPLFAAMGVAVGICGFQLVRNICINPEVRVNKQNRAAGVLENFAEGEKYTEHFLRKFVRNRPTEIMPSINKFFTDPN
        MA S+ +RW+RPEVYPLFAA+GVAVGICGFQLVRNICINPEVRV K+NRAAGVL+NFAEGEKYTEHFLRKFVRN+  EIMPSIN FFTDP+
Subjt:  MAHSSTSRWIRPEVYPLFAAMGVAVGICGFQLVRNICINPEVRVNKQNRAAGVLENFAEGEKYTEHFLRKFVRNRPTEIMPSINKFFTDPN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G29970.1 B12D protein

1.1e-22

53.09

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Query:  RWIRPEVYPLFAAMGVAVGICGFQLVRNICINPEVRVNKQNRAAGVLENFAEGEKYTEHFLRKFVRNRPTEIMPSINKFFT
        RW+RPEVYPL  AMG    +  FQL RN  +NP+ R+NK++R  G+LEN  EGEKY +H  RK++R R  ++MPS+N+FF+
Subjt:  RWIRPEVYPLFAAMGVAVGICGFQLVRNICINPEVRVNKQNRAAGVLENFAEGEKYTEHFLRKFVRNRPTEIMPSINKFFT

AT3G48140.1 B12D protein

8.2e-34

76.19

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Query:  SRWIRPEVYPLFAAMGVAVGICGFQLVRNICINPEVRVNKQNRAAGVLENFAEGEKYTEHFLRKFVRNRPTEIMPSINKFFTDP
        SRW+RPEVYPLFAA GVAVGIC F L+RNI  NPEVR  K+NRAAG+L+N AEGEKY E+FLRKFVRN+  EIMP +NKFFTDP
Subjt:  SRWIRPEVYPLFAAMGVAVGICGFQLVRNICINPEVRVNKQNRAAGVLENFAEGEKYTEHFLRKFVRNRPTEIMPSINKFFTDP

Sequences

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CDS sequence

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ATGGCTCATTCCAGCACAAGTCGATGGATCAGGCCTGAGGTTTACCCCCTCTTCGCCGCCATGGGAGTAGCCGTCGGAATCTGCGGATTTCAGTTGGTCCGTAACATCTG
CATCAACCCCGAAGTCAGAGTGAACAAACAGAATAGAGCCGCCGGCGTCCTGGAGAACTTCGCTGAGGGAGAGAAGTATACGGAGCATTTCCTGAGGAAGTTCGTCCGCA
ACAGGCCCACAGAAATTATGCCATCAATCAACAAGTTCTTCACTGACCCAAATTGA

mRNA sequence

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GACTTAAAAAAAAAAAGAAAAAGAAAGCGCAAGTGGAGACTTTTCCACGTGTCAAGATATGATTAGCCAAAAGGCGCAGCGTCGTAGCCAAGTAGGTCTTCTCCCCTTCT
TCCGATTCCGATTGAATCGCGTTGTTGTTGTTGTTGTTTTAGGTTTGTTGGCTGAAGTTGAAGAAGAATGGCTCATTCCAGCACAAGTCGATGGATCAGGCCTGAGGTTT
ACCCCCTCTTCGCCGCCATGGGAGTAGCCGTCGGAATCTGCGGATTTCAGTTGGTCCGTAACATCTGCATCAACCCCGAAGTCAGAGTGAACAAACAGAATAGAGCCGCC
GGCGTCCTGGAGAACTTCGCTGAGGGAGAGAAGTATACGGAGCATTTCCTGAGGAAGTTCGTCCGCAACAGGCCCACAGAAATTATGCCATCAATCAACAAGTTCTTCAC
TGACCCAAATTGAAACTAAGATGCTACGTGAATGAGCTACACATTAGTTTGGGTTGGTGGCTGTAAACTATGCTCTGCTGTTACGTTTGCCTAGAAAGTTTGAAAACAGT
GGTTTGATGAAATAAAATGTACTGAACCCGAATTTGATTTCAGTCATTGTGAACTTCTGATGCCAGTCTTTGTACGTCTGATTGTTTATGTTGATGGATATATGAATTGA
CTCTCCGTAGTGGAATATGTTGTTATCACTTGAACGGAATTCGATCGATTTGAATTTCTGAAAGGACTCACTTCTTGTAGTGTCATTGTTTGAACCATGGTTCTGTAAGA
GTAGAAGATTCCATTATAATTGGTCCAACAATACTATTGCTGCCGATTTGTTATCTAAACTCTTCGAGTTAGACAATTTATTGTGGATTGATTTCCGCAGCTTTGAAGAA
GGGGTTTCGAGTTTTTGGTGCAGGCATGTTCCCTTATGCGTGACCTCAACTATTTCAGTCGGGTGTTTATTTTTCTTAGTTTTGTTGTTTTGGTCTCTGGTGATTCGTTT
TCGTACCGTAATATCTTGCTTCTTTGTTTTTTAAAGAGGAATTGTCGATAAGGACATTTCTAATCTAGC

Protein sequence

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MAHSSTSRWIRPEVYPLFAAMGVAVGICGFQLVRNICINPEVRVNKQNRAAGVLENFAEGEKYTEHFLRKFVRNRPTEIMPSINKFFTDPN

Sed0022631 (gene) of Chayote v1 genome