; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0022650 (gene) of Chayote v1 genome

Gene IDSed0022650
OrganismSechium edule (Chayote v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationLG03:10472011..10473498
RNA-Seq ExpressionSed0022650
SyntenySed0022650
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132176.1 probable CCR4-associated factor 1 homolog 7 [Momordica charantia]7.7e-13082.09Show/hide
Query:  MSILPKRDRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTDKFCVWQ
        MSILPK + +HIREVWD NLEEEFAL+REIVD+FNYIAMDTEFPGVVLRP+ +F NIN+ NY TLK NVD LKLIQLGLTF DEN NLPTCGTDKFC+WQ
Subjt:  MSILPKRDRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTDKFCVWQ

Query:  FNFREFDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYDI
        FNFREF+I +DI+ASDSIELLRQCGIDFKKN+EEGIDV RF ELLMSSG+VLN  V+WVTFHSG+DFGYL+KLLTCR+LPDTQ GFF+LIN+YFP++YDI
Subjt:  FNFREFDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYDI

Query:  KHLMKFCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGLGVD
        KHLMKFCN  +GGLNKLAELL+VERIGVCHQAGSDSLLTA T++KLRD FFNGST+KYAGVLYGLGV+
Subjt:  KHLMKFCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGLGVD

XP_022132308.1 probable CCR4-associated factor 1 homolog 7 [Momordica charantia]4.1e-13183.96Show/hide
Query:  MSILPKRDRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTDKFCVWQ
        MSILPK D + IREVW+ NLEEEFALIREIVDEFNYIAMDTEFPGVVLRP+ +F NIND NY TLK NVD LKLIQLGLTF DEN NLPTCGTDKFC+WQ
Subjt:  MSILPKRDRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTDKFCVWQ

Query:  FNFREFDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYDI
        FNFREF++ +DI+ASDSIELLRQCGIDFKKN+EEGIDV RFGELLMSSGVVLN  V+WVTFHSG+DFGYL+KLLTCR LPDTQ GFF+LINIYFP++YDI
Subjt:  FNFREFDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYDI

Query:  KHLMKFCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGLGVD
        KHLMKFCN L+GGLNKLAELL+VERIGVCHQAGSDSLLTA T++KLRD FFNGST+KYAGVLYGLGV+
Subjt:  KHLMKFCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGLGVD

XP_022951691.1 probable CCR4-associated factor 1 homolog 7 [Cucurbita moschata]3.0e-13485.56Show/hide
Query:  MSILPKRDRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTDKFCVWQ
        MSILPK D + IREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPL +F NIND NY TLK+NVDTLKLIQLGLTF DEN NLPTCGTDKFC+WQ
Subjt:  MSILPKRDRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTDKFCVWQ

Query:  FNFREFDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYDI
        FNFREF+ ++DI+ASDSIELLRQCGIDF+KN+EEGIDV RFGELLMSSGVVLN+DV WVTFHSG+DFGYL+KLLTCRALP+TQ GFFELI IYFPVLYDI
Subjt:  FNFREFDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYDI

Query:  KHLMKFCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGLGVDKE
        KHLMKFCN L+GGLNKLAELL+VERIGVCHQAGSDSLLTA T++KLR  FFNGST+KYAGVLYGLGV+ E
Subjt:  KHLMKFCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGLGVDKE

XP_022962201.1 probable CCR4-associated factor 1 homolog 7 [Cucurbita moschata]1.0e-12982.84Show/hide
Query:  MSILPKRDRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTDKFCVWQ
        MSILPK D + IREVW+ NLEEEFALIREIVD+FNYIAMDTEFPGVVLRPL +F NIND NY TLK NVD LKLIQLGLTF DEN NLPTCGTD FC+WQ
Subjt:  MSILPKRDRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTDKFCVWQ

Query:  FNFREFDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYDI
        FNFREF+IV DI+ASDSIELLRQCGIDF+KN+EEGIDV RFGELLMSSGVVLN DV+WVTFHSG+DFGYL+KLLTCR LP+ Q+GFF+LIN+YFPV+YDI
Subjt:  FNFREFDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYDI

Query:  KHLMKFCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGLGVD
        KHLMKFCN L+GGLNKLAELL+VERIGVCHQAGSDSLLTA T++KLR+ FFNGS +KYAGVLYGLGV+
Subjt:  KHLMKFCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGLGVD

XP_038885551.1 probable CCR4-associated factor 1 homolog 7 [Benincasa hispida]6.3e-13284.7Show/hide
Query:  MSILPKRDRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTDKFCVWQ
        MSILPK D + IREVW+ANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPL +F NIND NY TLK NVD LKLIQLGLTF DEN NLPTCGTDKFC+WQ
Subjt:  MSILPKRDRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTDKFCVWQ

Query:  FNFREFDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYDI
        FNFREF+I +DI+ASDSIELLRQCGIDF+KN+EEGIDV RFGELLMSSGVVLN+DV+WVTFHSG+DFGYL+KLLTCR LP+ Q GFFELIN+YFPV+YDI
Subjt:  FNFREFDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYDI

Query:  KHLMKFCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGLGVD
        KHLMKFCN L+GGLNKLAELL+VERIGVCHQAGSDSLLTA T++KLRD FFNGS +KYAGVLYGLGVD
Subjt:  KHLMKFCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGLGVD

TrEMBL top hitse value%identityAlignment
A0A6J1BRI8 Poly(A)-specific ribonuclease3.7e-13082.09Show/hide
Query:  MSILPKRDRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTDKFCVWQ
        MSILPK + +HIREVWD NLEEEFAL+REIVD+FNYIAMDTEFPGVVLRP+ +F NIN+ NY TLK NVD LKLIQLGLTF DEN NLPTCGTDKFC+WQ
Subjt:  MSILPKRDRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTDKFCVWQ

Query:  FNFREFDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYDI
        FNFREF+I +DI+ASDSIELLRQCGIDFKKN+EEGIDV RF ELLMSSG+VLN  V+WVTFHSG+DFGYL+KLLTCR+LPDTQ GFF+LIN+YFP++YDI
Subjt:  FNFREFDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYDI

Query:  KHLMKFCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGLGVD
        KHLMKFCN  +GGLNKLAELL+VERIGVCHQAGSDSLLTA T++KLRD FFNGST+KYAGVLYGLGV+
Subjt:  KHLMKFCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGLGVD

A0A6J1BVW9 Poly(A)-specific ribonuclease2.0e-13183.96Show/hide
Query:  MSILPKRDRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTDKFCVWQ
        MSILPK D + IREVW+ NLEEEFALIREIVDEFNYIAMDTEFPGVVLRP+ +F NIND NY TLK NVD LKLIQLGLTF DEN NLPTCGTDKFC+WQ
Subjt:  MSILPKRDRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTDKFCVWQ

Query:  FNFREFDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYDI
        FNFREF++ +DI+ASDSIELLRQCGIDFKKN+EEGIDV RFGELLMSSGVVLN  V+WVTFHSG+DFGYL+KLLTCR LPDTQ GFF+LINIYFP++YDI
Subjt:  FNFREFDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYDI

Query:  KHLMKFCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGLGVD
        KHLMKFCN L+GGLNKLAELL+VERIGVCHQAGSDSLLTA T++KLRD FFNGST+KYAGVLYGLGV+
Subjt:  KHLMKFCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGLGVD

A0A6J1GI81 Poly(A)-specific ribonuclease1.5e-13485.56Show/hide
Query:  MSILPKRDRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTDKFCVWQ
        MSILPK D + IREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPL +F NIND NY TLK+NVDTLKLIQLGLTF DEN NLPTCGTDKFC+WQ
Subjt:  MSILPKRDRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTDKFCVWQ

Query:  FNFREFDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYDI
        FNFREF+ ++DI+ASDSIELLRQCGIDF+KN+EEGIDV RFGELLMSSGVVLN+DV WVTFHSG+DFGYL+KLLTCRALP+TQ GFFELI IYFPVLYDI
Subjt:  FNFREFDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYDI

Query:  KHLMKFCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGLGVDKE
        KHLMKFCN L+GGLNKLAELL+VERIGVCHQAGSDSLLTA T++KLR  FFNGST+KYAGVLYGLGV+ E
Subjt:  KHLMKFCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGLGVDKE

A0A6J1HCG0 Poly(A)-specific ribonuclease4.8e-13082.84Show/hide
Query:  MSILPKRDRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTDKFCVWQ
        MSILPK D + IREVW+ NLEEEFALIREIVD+FNYIAMDTEFPGVVLRPL +F NIND NY TLK NVD LKLIQLGLTF DEN NLPTCGTD FC+WQ
Subjt:  MSILPKRDRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTDKFCVWQ

Query:  FNFREFDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYDI
        FNFREF+IV DI+ASDSIELLRQCGIDF+KN+EEGIDV RFGELLMSSGVVLN DV+WVTFHSG+DFGYL+KLLTCR LP+ Q+GFF+LIN+YFPV+YDI
Subjt:  FNFREFDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYDI

Query:  KHLMKFCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGLGVD
        KHLMKFCN L+GGLNKLAELL+VERIGVCHQAGSDSLLTA T++KLR+ FFNGS +KYAGVLYGLGV+
Subjt:  KHLMKFCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGLGVD

A0A6J1KTM7 Poly(A)-specific ribonuclease1.5e-13485.56Show/hide
Query:  MSILPKRDRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTDKFCVWQ
        MSILPK D + IREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPL +F NIND NY TLK+NVDTLKLIQLGLTF DEN NLPTCGTDKFC+WQ
Subjt:  MSILPKRDRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTDKFCVWQ

Query:  FNFREFDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYDI
        FNFREF+ ++DI+ASDSIELLRQCGIDF+KN+EEGIDV RFGELLMSSGVVLN+DV WVTFHSG+DFGYL+KLLTCRALP+TQ GFFELI IYFPVLYDI
Subjt:  FNFREFDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYDI

Query:  KHLMKFCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGLGVDKE
        KHLMKFCN L+GGLNKLAELL+VERIGVCHQAGSDSLLTA T++KLR  FFNGST+KYAGVLYGLGV+ E
Subjt:  KHLMKFCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGLGVDKE

SwissProt top hitse value%identityAlignment
Q08BM8 CCR4-NOT transcription complex subunit 74.6e-7755.25Show/hide
Query:  IREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTDKFCVWQFNFREFDIVDD
        I EVW  NLEEE   IR++  +FNYIAMDTEFPGVV RP+  F +  D  Y  L+ NVD LK+IQLGLTF +E    P  GT     WQFNF+ F++ +D
Subjt:  IREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTDKFCVWQFNFREFDIVDD

Query:  IYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYDIKHLMKFCNGLY
        +YA DSIELL   GI FKK+ EEGI+ + F ELLM+SGVVL   V W++FHSG+DFGYL+K+L+   LPD +  FFE++ ++FP++YD+K+LMK C  L 
Subjt:  IYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYDIKHLMKFCNGLY

Query:  GGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTE--KYAGVLYGLG
        GGL ++AE L++ERIG  HQAGSDSLLT   + K+R++FF    +  KY G LYGLG
Subjt:  GGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTE--KYAGVLYGLG

Q9LEU4 Probable CCR4-associated factor 1 homolog 104.8e-11974.9Show/hide
Query:  KRDRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTDKFCVWQFNFRE
        K D + IREVWD NL EEFALIREIVD+F+YIAMDTEFPGVVL+P+A+F   NDLNY TLK NVD LKLIQ+GLTF DEN NLPTCGTDKFC+WQFNFRE
Subjt:  KRDRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTDKFCVWQFNFRE

Query:  FDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYDIKHLMK
        F+I +DIYAS+SIELLRQCGIDFKKN E+GIDV+RFGEL+MSSG+VLN  +SWVTFH G+DFGYLVKLLTC+ LP  Q  FF+L+ +YFP +YDIKHLM 
Subjt:  FDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYDIKHLMK

Query:  FCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGLGVD
        FCNGL+GGLN+LAEL+ VER+G+CHQAGSDSLLT  +++KL++ +F GSTEKY GVLYGLGV+
Subjt:  FCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGLGVD

Q9S9P2 Probable CCR4-associated factor 1 homolog 24.3e-9159.09Show/hide
Query:  DRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNIN------DLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTDKFCVWQF
        D + IREVW+ NLE+E ALI + +D+F Y+AMDTEFPG+V + + +  N N      + NY TLKANV+ LKLIQLGLT  DE  NLPTCGT+K C+WQF
Subjt:  DRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNIN------DLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTDKFCVWQF

Query:  NFREFDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYDIK
        NFREF+++ D++A DSIELLR+  ID +KN+E G+D  RF ELLM SGVVLN  + WVTFH G+DFGYL+KLL+ + LP+    FF+ +  +FPV+YDIK
Subjt:  NFREFDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYDIK

Query:  HLMKFCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGL
        +LM FC  LYGGL K+AELL V+R+G+ HQAGSDSLLT RT+ K+++ FF GS  KY+G L+GL
Subjt:  HLMKFCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGL

Q9SAI2 Probable CCR4-associated factor 1 homolog 64.1e-11067.54Show/hide
Query:  MSILPKRDRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTDKFCVWQ
        MS+  K D + IREVW+ NL+EE  LIR++VD+F Y+AMDTEFPG+V+RP+ +F +  D +Y TLK NV+ LK+IQLGLTF +E  NLPTCGTDK+C+WQ
Subjt:  MSILPKRDRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTDKFCVWQ

Query:  FNFREFDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYDI
        FNFREFD+  DI+A DSIELL+Q GID  KN+ +GID  RF ELLMSSG+VLN +V WVTFHSG+DFGYL+KLLTC+ LPD+Q  FF+LIN+YFP +YDI
Subjt:  FNFREFDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYDI

Query:  KHLMKFCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGLGVD
        KHLMKFCN L+GGLNKLAELL+VER+G+CHQAGSDSLLT+ T++KL++ FF G   KY+GVLYGLGV+
Subjt:  KHLMKFCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGLGVD

Q9SKZ2 Probable CCR4-associated factor 1 homolog 76.8e-11370.26Show/hide
Query:  MSILPKRDRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTD-KFCVW
        MS+  K D + IREVW+ NLE E ALIRE+VD+F ++AMDTEFPG+V RP+ +F    + +Y TLK NV+ LK+IQLGLTF DE  NLPTCGTD K+C+W
Subjt:  MSILPKRDRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTD-KFCVW

Query:  QFNFREFDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYD
        QFNFREFD+  DIYA+DSIELLRQ GIDF KN+E GID  RF ELLMSSG+VLN +V WVTFHSG+DFGYL+KLLTC+ LP+TQ GFFE+I++YFP +YD
Subjt:  QFNFREFDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYD

Query:  IKHLMKFCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGLGVD
        IKHLMKFCN L+GGLNKLAELLDVER+G+CHQAGSDSLLT+ T++KL++ FF GS EKY+GVLYGLGV+
Subjt:  IKHLMKFCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGLGVD

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.9e-11167.54Show/hide
Query:  MSILPKRDRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTDKFCVWQ
        MS+  K D + IREVW+ NL+EE  LIR++VD+F Y+AMDTEFPG+V+RP+ +F +  D +Y TLK NV+ LK+IQLGLTF +E  NLPTCGTDK+C+WQ
Subjt:  MSILPKRDRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTDKFCVWQ

Query:  FNFREFDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYDI
        FNFREFD+  DI+A DSIELL+Q GID  KN+ +GID  RF ELLMSSG+VLN +V WVTFHSG+DFGYL+KLLTC+ LPD+Q  FF+LIN+YFP +YDI
Subjt:  FNFREFDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYDI

Query:  KHLMKFCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGLGVD
        KHLMKFCN L+GGLNKLAELL+VER+G+CHQAGSDSLLT+ T++KL++ FF G   KY+GVLYGLGV+
Subjt:  KHLMKFCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGLGVD

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.9e-11167.54Show/hide
Query:  MSILPKRDRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTDKFCVWQ
        MS+  K D + IREVW+ NL+EE  LIR++VD+F Y+AMDTEFPG+V+RP+ +F +  D +Y TLK NV+ LK+IQLGLTF +E  NLPTCGTDK+C+WQ
Subjt:  MSILPKRDRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTDKFCVWQ

Query:  FNFREFDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYDI
        FNFREFD+  DI+A DSIELL+Q GID  KN+ +GID  RF ELLMSSG+VLN +V WVTFHSG+DFGYL+KLLTC+ LPD+Q  FF+LIN+YFP +YDI
Subjt:  FNFREFDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYDI

Query:  KHLMKFCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGLGVD
        KHLMKFCN L+GGLNKLAELL+VER+G+CHQAGSDSLLT+ T++KL++ FF G   KY+GVLYGLGV+
Subjt:  KHLMKFCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGLGVD

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.9e-11267.41Show/hide
Query:  MSILPKRDRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTDKFCVWQ
        MS+  K D + IREVW+ NL+EE  LIR++VD+F Y+AMDTEFPG+V+RP+ +F +  D +Y TLK NV+ LK+IQLGLTF +E  NLPTCGTDK+C+WQ
Subjt:  MSILPKRDRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTDKFCVWQ

Query:  FNFREFDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYDI
        FNFREFD+  DI+A DSIELL+Q GID  KN+ +GID  RF ELLMSSG+VLN +V WVTFHSG+DFGYL+KLLTC+ LPD+Q  FF+LIN+YFP +YDI
Subjt:  FNFREFDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYDI

Query:  KHLMKFCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGLGVDKE
        KHLMKFCN L+GGLNKLAELL+VER+G+CHQAGSDSLLT+ T++KL++ FF G   KY+GVLYGLGV+ E
Subjt:  KHLMKFCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGLGVDKE

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.8e-11470.26Show/hide
Query:  MSILPKRDRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTD-KFCVW
        MS+  K D + IREVW+ NLE E ALIRE+VD+F ++AMDTEFPG+V RP+ +F    + +Y TLK NV+ LK+IQLGLTF DE  NLPTCGTD K+C+W
Subjt:  MSILPKRDRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTD-KFCVW

Query:  QFNFREFDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYD
        QFNFREFD+  DIYA+DSIELLRQ GIDF KN+E GID  RF ELLMSSG+VLN +V WVTFHSG+DFGYL+KLLTC+ LP+TQ GFFE+I++YFP +YD
Subjt:  QFNFREFDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYD

Query:  IKHLMKFCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGLGVD
        IKHLMKFCN L+GGLNKLAELLDVER+G+CHQAGSDSLLT+ T++KL++ FF GS EKY+GVLYGLGV+
Subjt:  IKHLMKFCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGLGVD

AT5G10960.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.4e-12074.9Show/hide
Query:  KRDRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTDKFCVWQFNFRE
        K D + IREVWD NL EEFALIREIVD+F+YIAMDTEFPGVVL+P+A+F   NDLNY TLK NVD LKLIQ+GLTF DEN NLPTCGTDKFC+WQFNFRE
Subjt:  KRDRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTDKFCVWQFNFRE

Query:  FDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYDIKHLMK
        F+I +DIYAS+SIELLRQCGIDFKKN E+GIDV+RFGEL+MSSG+VLN  +SWVTFH G+DFGYLVKLLTC+ LP  Q  FF+L+ +YFP +YDIKHLM 
Subjt:  FDIVDDIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYDIKHLMK

Query:  FCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGLGVD
        FCNGL+GGLN+LAEL+ VER+G+CHQAGSDSLLT  +++KL++ +F GSTEKY GVLYGLGV+
Subjt:  FCNGLYGGLNKLAELLDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGLGVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATTTTACCGAAGCGCGATAGGGTTCATATTCGCGAGGTTTGGGATGCTAATTTGGAGGAGGAGTTTGCGCTTATTCGTGAGATTGTTGATGAGTTTAATTACAT
AGCTATGGACACTGAGTTTCCCGGCGTGGTGCTTCGGCCGCTCGCTTCGTTCGACAACATCAATGACTTGAACTACCATACTCTCAAGGCTAATGTCGACACCTTGAAGT
TGATTCAATTGGGTCTTACGTTCTGCGACGAGAATGAAAATCTTCCCACTTGTGGGACGGATAAGTTTTGCGTTTGGCAGTTCAATTTCCGCGAGTTCGACATTGTTGAC
GATATTTATGCTAGTGATTCCATTGAGCTTCTTCGTCAGTGTGGTATTGATTTTAAGAAGAATAGTGAAGAGGGTATTGATGTGATTCGATTTGGGGAGCTTCTAATGTC
ATCTGGGGTTGTGTTGAACCATGATGTTAGCTGGGTTACGTTCCACAGTGGGCATGATTTTGGTTACTTGGTGAAATTGCTGACTTGTCGAGCCTTGCCGGATACGCAGG
AGGGGTTTTTCGAGTTGATCAATATCTATTTTCCGGTGCTTTATGATATCAAGCATTTGATGAAGTTTTGCAATGGTCTGTATGGTGGATTGAACAAACTTGCTGAGTTA
TTAGATGTTGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTTTACTTACTGCACGTACTTATCAGAAATTGAGGGATATCTTTTTCAATGGATCTACAGAGAA
ATATGCAGGTGTTTTATATGGTCTCGGTGTCGACAAAGAATAG
mRNA sequenceShow/hide mRNA sequence
CGCCAACATTGAACTTGGTATAAACAAAAATAGCGAAGCGCAAGAACGGCGTCGTATTAGGAAAGTCAAAACGACGTCGAATCAGCGTTTCGTCCTCGTCTATCACCGTC
TTAGAGAGAGCAATGTTTTAGGGAAAGGTCTCAGCCCAGTTCTCAAACCCTCTTCTCTGTGCTTCTCCGCCTCCTCTTCGTCTTCTTCGTTGACCCACAAGCTTCATCTC
CATTTTCACCGACCTCTAAATCCACTGCTCCCTTCTCATAGATCTGCCATTTCCGCCCTTCAATTCTGTTTTTCAAGATCTATCCAGATTCGTCTGATTCGCTTACTTTG
GTGACGACCCATCTCCTCGTTTGTAGATCTTGAGCTCTTCTGCGATCTGTTTCGAGGGATGTCGATTTTACCGAAGCGCGATAGGGTTCATATTCGCGAGGTTTGGGATG
CTAATTTGGAGGAGGAGTTTGCGCTTATTCGTGAGATTGTTGATGAGTTTAATTACATAGCTATGGACACTGAGTTTCCCGGCGTGGTGCTTCGGCCGCTCGCTTCGTTC
GACAACATCAATGACTTGAACTACCATACTCTCAAGGCTAATGTCGACACCTTGAAGTTGATTCAATTGGGTCTTACGTTCTGCGACGAGAATGAAAATCTTCCCACTTG
TGGGACGGATAAGTTTTGCGTTTGGCAGTTCAATTTCCGCGAGTTCGACATTGTTGACGATATTTATGCTAGTGATTCCATTGAGCTTCTTCGTCAGTGTGGTATTGATT
TTAAGAAGAATAGTGAAGAGGGTATTGATGTGATTCGATTTGGGGAGCTTCTAATGTCATCTGGGGTTGTGTTGAACCATGATGTTAGCTGGGTTACGTTCCACAGTGGG
CATGATTTTGGTTACTTGGTGAAATTGCTGACTTGTCGAGCCTTGCCGGATACGCAGGAGGGGTTTTTCGAGTTGATCAATATCTATTTTCCGGTGCTTTATGATATCAA
GCATTTGATGAAGTTTTGCAATGGTCTGTATGGTGGATTGAACAAACTTGCTGAGTTATTAGATGTTGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTTTAC
TTACTGCACGTACTTATCAGAAATTGAGGGATATCTTTTTCAATGGATCTACAGAGAAATATGCAGGTGTTTTATATGGTCTCGGTGTCGACAAAGAATAGCGTACTACT
ACTACTAATTGAAGAGAATTGCCCAGCATTTGTAGAAGTGTGAGACTTTTAGTTATCTTTGTACAATTTGACTAAAGCATTGATGATGATTGTAACTGTTTTTAAGCTTT
CCTGCTCTGTAATAGAAACCCCTGACTGTGTTTTGCAGCTCGTGGTTTCTTGTAAATTATGGCAGTTAGTGTTTC
Protein sequenceShow/hide protein sequence
MSILPKRDRVHIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLASFDNINDLNYHTLKANVDTLKLIQLGLTFCDENENLPTCGTDKFCVWQFNFREFDIVD
DIYASDSIELLRQCGIDFKKNSEEGIDVIRFGELLMSSGVVLNHDVSWVTFHSGHDFGYLVKLLTCRALPDTQEGFFELINIYFPVLYDIKHLMKFCNGLYGGLNKLAEL
LDVERIGVCHQAGSDSLLTARTYQKLRDIFFNGSTEKYAGVLYGLGVDKE