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Sed0022675 (gene) of Chayote v1 genome

Gene IDSed0022675
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG01:6468526..6469013
RNA-Seq ExpressionSed0022675
SyntenySed0022675
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8038998.1 hypothetical protein FH972_011451 [Carpinus fangiana]1.4e-0551.85Show/hide
Query:  QINYPALTSFLDVDRSFFSPWNWSPNSPPQVHDQENPRRNG--RMNFQSGSFFS
        +++YP LTSFL+VD SF SPW W P+      D ++    G  RMNFQ GSFFS
Subjt:  QINYPALTSFLDVDRSFFSPWNWSPNSPPQVHDQENPRRNG--RMNFQSGSFFS

KAG6605482.1 hypothetical protein SDJN03_02799, partial [Cucurbita argyrosperma subsp. sororia]3.1e-1664.47Show/hide
Query:  PPPQAPPSRASQINYPALTSFLDVDRSFFSPWNWSPNSPPQVHDQENPRRNGRMNFQS-GSFFSDDQELYDTMSGK
        PPP  PP +  +I+Y  LTSFL+VDRSFFSPWNW+PNSP    D EN R N RM FQS  SFFS+DQ+LY  MSGK
Subjt:  PPPQAPPSRASQINYPALTSFLDVDRSFFSPWNWSPNSPPQVHDQENPRRNGRMNFQS-GSFFSDDQELYDTMSGK

XP_022148435.1 uncharacterized protein LOC111017083 [Momordica charantia]6.9e-0844.64Show/hide
Query:  LLNKMVFDEDLRRRIHGMQLLQ--QQQHLPPPQ----APPS-RASQINYPALTSFLDVDRSFFSPWNWSPN-SPPQVHDQEN----PRRNGRMNFQSGSF
        L+ + +  E   R+  G++L +  QQ H  P      APPS  A +++Y  LT+FL+ DRSFFSPWNWSPN +P Q H  +        N RM F  GSF
Subjt:  LLNKMVFDEDLRRRIHGMQLLQ--QQQHLPPPQ----APPS-RASQINYPALTSFLDVDRSFFSPWNWSPN-SPPQVHDQEN----PRRNGRMNFQSGSF

Query:  FSDD--QELYDT
        FSDD  QEL +T
Subjt:  FSDD--QELYDT

TrEMBL top hitse value%identityAlignment
A0A660KUE7 Uncharacterized protein7.0e-0651.85Show/hide
Query:  QINYPALTSFLDVDRSFFSPWNWSPNSPPQVHDQENPRRNG--RMNFQSGSFFS
        +++YP LTSFL+VD SF SPW W P+      D ++    G  RMNFQ GSFFS
Subjt:  QINYPALTSFLDVDRSFFSPWNWSPNSPPQVHDQENPRRNG--RMNFQSGSFFS

A0A6J1D2W9 uncharacterized protein LOC1110170833.4e-0844.64Show/hide
Query:  LLNKMVFDEDLRRRIHGMQLLQ--QQQHLPPPQ----APPS-RASQINYPALTSFLDVDRSFFSPWNWSPN-SPPQVHDQEN----PRRNGRMNFQSGSF
        L+ + +  E   R+  G++L +  QQ H  P      APPS  A +++Y  LT+FL+ DRSFFSPWNWSPN +P Q H  +        N RM F  GSF
Subjt:  LLNKMVFDEDLRRRIHGMQLLQ--QQQHLPPPQ----APPS-RASQINYPALTSFLDVDRSFFSPWNWSPN-SPPQVHDQEN----PRRNGRMNFQSGSF

Query:  FSDD--QELYDT
        FSDD  QEL +T
Subjt:  FSDD--QELYDT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGACAACAACGGACGCATAATCCGTGTACTCCTCAATAAAATGGTGTTCGACGAGGACTTGCGTCGCCGCATTCATGGCATGCAGTTGCTGCAGCAGCAGCAGCA
CCTACCGCCGCCGCAAGCACCGCCGAGCCGTGCATCTCAAATAAACTATCCTGCCCTTACTTCGTTTCTCGATGTCGATCGCTCGTTCTTTTCGCCCTGGAATTGGAGCC
CTAATTCACCACCACAAGTTCATGATCAGGAGAATCCGAGAAGAAACGGCCGCATGAATTTTCAATCTGGTTCGTTCTTCAGCGACGATCAGGAATTATACGATACGATG
AGCGGCAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGACAACAACGGACGCATAATCCGTGTACTCCTCAATAAAATGGTGTTCGACGAGGACTTGCGTCGCCGCATTCATGGCATGCAGTTGCTGCAGCAGCAGCAGCA
CCTACCGCCGCCGCAAGCACCGCCGAGCCGTGCATCTCAAATAAACTATCCTGCCCTTACTTCGTTTCTCGATGTCGATCGCTCGTTCTTTTCGCCCTGGAATTGGAGCC
CTAATTCACCACCACAAGTTCATGATCAGGAGAATCCGAGAAGAAACGGCCGCATGAATTTTCAATCTGGTTCGTTCTTCAGCGACGATCAGGAATTATACGATACGATG
AGCGGCAAATAG
Protein sequenceShow/hide protein sequence
MEDNNGRIIRVLLNKMVFDEDLRRRIHGMQLLQQQQHLPPPQAPPSRASQINYPALTSFLDVDRSFFSPWNWSPNSPPQVHDQENPRRNGRMNFQSGSFFSDDQELYDTM
SGK