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Sed0022737 (gene) of Chayote v1 genome

Gene IDSed0022737
OrganismSechium edule (Chayote v1)
DescriptionGCK domain-containing protein
Genome locationLG06:39771267..39772245
RNA-Seq ExpressionSed0022737
SyntenySed0022737
Gene Ontology termsGO:0006414 - translational elongation (biological process)
GO:0003746 - translation elongation factor activity (molecular function)
InterPro domainsIPR012891 - GCK


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013125.1 hypothetical protein SDJN02_25881, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-5274.01Show/hide
Query:  MSTSNPKLQDAESNAAAAASETLEDQQQSGSPIQSAEKS----DQSETIPEIGGEEDLEGEGEGEEEEEGECGFCLFMKGGGCKDSFTAWEKCIEEAEKN
        MSTSN KLQDAESN  AAA++TLED+QQSGSPI   EKS    DQS  IPE GGE+        EEEEEGECGFCLFMKGGGCKDSF  WEKCIEEAEKN
Subjt:  MSTSNPKLQDAESNAAAAASETLEDQQQSGSPIQSAEKS----DQSETIPEIGGEEDLEGEGEGEEEEEGECGFCLFMKGGGCKDSFTAWEKCIEEAEKN

Query:  KEDIVEKCFEVTGALKKCMEAHAEYYDPILKAEKMAEEEAIIEVEKEKTPD----ATQQNANSENSEKPKAASAGGK
        KEDIVEKCFEVTGALKKCMEAHA+YY+PILKAEKMAEEEAIIE+EKE TPD      + N  S NSE+ K ASAG K
Subjt:  KEDIVEKCFEVTGALKKCMEAHAEYYDPILKAEKMAEEEAIIEVEKEKTPD----ATQQNANSENSEKPKAASAGGK

XP_022945633.1 uncharacterized protein LOC111449816 [Cucurbita moschata]8.1e-5374.58Show/hide
Query:  MSTSNPKLQDAESNAAAAASETLEDQQQSGSPIQSAEK----SDQSETIPEIGGEEDLEGEGEGEEEEEGECGFCLFMKGGGCKDSFTAWEKCIEEAEKN
        MSTSN KLQDAESN  AAA++TLED+QQSGSPI   EK    SDQS  IPE GGE+        EEEEEGECGFCLFMKGGGCKDSF  WEKCIEEAEKN
Subjt:  MSTSNPKLQDAESNAAAAASETLEDQQQSGSPIQSAEK----SDQSETIPEIGGEEDLEGEGEGEEEEEGECGFCLFMKGGGCKDSFTAWEKCIEEAEKN

Query:  KEDIVEKCFEVTGALKKCMEAHAEYYDPILKAEKMAEEEAIIEVEKEKTPDAT----QQNANSENSEKPKAASAGGK
        KEDIVEKCFEVTGALKKCMEAHA+YY+PILKAEKMAEEEAIIE+EKE TPDA     + N  S NSE+ K ASAG K
Subjt:  KEDIVEKCFEVTGALKKCMEAHAEYYDPILKAEKMAEEEAIIEVEKEKTPDAT----QQNANSENSEKPKAASAGGK

XP_022968451.1 uncharacterized protein LOC111467693 [Cucurbita maxima]1.8e-5274.01Show/hide
Query:  MSTSNPKLQDAESNAAAAASETLEDQQQSGSPIQSAEKS----DQSETIPEIGGEEDLEGEGEGEEEEEGECGFCLFMKGGGCKDSFTAWEKCIEEAEKN
        MSTSN KLQDAESN  AAA++TLED+QQSGSPI   EKS    DQS  IPE GGE+        EEEEEGECGFCLFMKGGGCKDSF  WEKCIEEAEKN
Subjt:  MSTSNPKLQDAESNAAAAASETLEDQQQSGSPIQSAEKS----DQSETIPEIGGEEDLEGEGEGEEEEEGECGFCLFMKGGGCKDSFTAWEKCIEEAEKN

Query:  KEDIVEKCFEVTGALKKCMEAHAEYYDPILKAEKMAEEEAIIEVEKEKTPDAT----QQNANSENSEKPKAASAGGK
        KEDIVEKCFEVTGALKKCMEAHA+YY+PILKAEKMAEEEAI+E+EKE TPDA     + N  S NSE+ K ASAG K
Subjt:  KEDIVEKCFEVTGALKKCMEAHAEYYDPILKAEKMAEEEAIIEVEKEKTPDAT----QQNANSENSEKPKAASAGGK

XP_022997117.1 uncharacterized protein LOC111492108 [Cucurbita maxima]7.6e-5170.39Show/hide
Query:  MSTSNPKLQDAESNAAAAASETLEDQQQSGSPIQSAEKSD----QSETIPEIGGEEDLEGEGEGEEEEEGECGFCLFMKGGGCKDSFTAWEKCIEEAEKN
        MSTS  KLQDAESNAAAAA++T EDQQQ G+P  S EKS     QS  I E GGE+  EG  + +EEEEGECGFCLFMKGGGC+DSF  WEKCIEEAEKN
Subjt:  MSTSNPKLQDAESNAAAAASETLEDQQQSGSPIQSAEKSD----QSETIPEIGGEEDLEGEGEGEEEEEGECGFCLFMKGGGCKDSFTAWEKCIEEAEKN

Query:  KEDIVEKCFEVTGALKKCMEAHAEYYDPILKAEKMAEEEAIIEVEKEKTPDATQQNANS---------ENSEKPKAASA
        KEDIVEKCFEVTGALKKCMEAHA+YY+PILKAEKMAE EAIIE+EKE TP+ATQQ+ +S         EN E+ KA++A
Subjt:  KEDIVEKCFEVTGALKKCMEAHAEYYDPILKAEKMAEEEAIIEVEKEKTPDATQQNANS---------ENSEKPKAASA

XP_023542530.1 uncharacterized protein LOC111802412 [Cucurbita pepo subsp. pepo]5.8e-5172.88Show/hide
Query:  MSTSNPKLQDAESNAAAAASETLEDQQQSGSPIQSAEKS----DQSETIPEIGGEEDLEGEGEGEEEEEGECGFCLFMKGGGCKDSFTAWEKCIEEAEKN
        MSTSN KLQ AESN  AAA++TLED+QQSGSPI   EKS    DQS  IPE GGE+        EEEEEGECGFCLFMKGGGCKDSF  WEKCIEEAEK+
Subjt:  MSTSNPKLQDAESNAAAAASETLEDQQQSGSPIQSAEKS----DQSETIPEIGGEEDLEGEGEGEEEEEGECGFCLFMKGGGCKDSFTAWEKCIEEAEKN

Query:  KEDIVEKCFEVTGALKKCMEAHAEYYDPILKAEKMAEEEAIIEVEKEKTPDAT----QQNANSENSEKPKAASAGGK
        KEDIVEKCFEVTGALKKCMEAHA+YY+PILKAEKMAEEEAIIE+EKE TPD      + N  S NSE+ K ASAG K
Subjt:  KEDIVEKCFEVTGALKKCMEAHAEYYDPILKAEKMAEEEAIIEVEKEKTPDAT----QQNANSENSEKPKAASAGGK

TrEMBL top hitse value%identityAlignment
A0A0A0KU46 GCK domain-containing protein5.9e-4971.1Show/hide
Query:  MSTSNPKLQDAESNAAAAASETLEDQQQSGSPIQSAEKSDQ----SETIPEIGGEEDLEGEGEGEEEEEGECGFCLFMKGGGCKDSFTAWEKCIEEAEKN
        MSTS  KLQDAESN  AAA++TLEDQ QS +P  S EKS +    S  I E GG +  EG  + EEEEEGECGFCLFMKGGGC+DSF AWEKCIEEAEKN
Subjt:  MSTSNPKLQDAESNAAAAASETLEDQQQSGSPIQSAEKSDQ----SETIPEIGGEEDLEGEGEGEEEEEGECGFCLFMKGGGCKDSFTAWEKCIEEAEKN

Query:  KEDIVEKCFEVTGALKKCMEAHAEYYDPILKAEKMAEEEAIIEVEKEKTPDATQQNANSENSEKPKAASAGGK
        KEDIVEKCFEVTGALKKCMEAH +YY+PILKAEKMAEEEAIIE+EKE TP A+QQ+ NS+  +    AS GGK
Subjt:  KEDIVEKCFEVTGALKKCMEAHAEYYDPILKAEKMAEEEAIIEVEKEKTPDATQQNANSENSEKPKAASAGGK

A0A5A7SVC8 Transcription elongation factor spt5-like6.5e-4870.86Show/hide
Query:  MSTSNPKLQDAESNAAAAASETLEDQQQSGSPIQSAEKSDQ----SETIPEIGG--EEDLEGEGEGEEEEEGECGFCLFMKGGGCKDSFTAWEKCIEEAE
        MSTS  KLQDAESN  AAAS+TLEDQ QS S   S EKS +    S  I E GG  E   + E E EEEEEGECGFCLFMKGGGC+DSF AWEKCIEEAE
Subjt:  MSTSNPKLQDAESNAAAAASETLEDQQQSGSPIQSAEKSDQ----SETIPEIGG--EEDLEGEGEGEEEEEGECGFCLFMKGGGCKDSFTAWEKCIEEAE

Query:  KNKEDIVEKCFEVTGALKKCMEAHAEYYDPILKAEKMAEEEAIIEVEKEKTPDATQQNANSENSEKPKAASAGGK
        KNKEDIVEKCFEVTGALKKCMEAH +YY+PILKAEKMAEEEAIIE+EKE  P A+Q++ NS+  +    ASAGGK
Subjt:  KNKEDIVEKCFEVTGALKKCMEAHAEYYDPILKAEKMAEEEAIIEVEKEKTPDATQQNANSENSEKPKAASAGGK

A0A6J1G1F8 uncharacterized protein LOC1114498163.9e-5374.58Show/hide
Query:  MSTSNPKLQDAESNAAAAASETLEDQQQSGSPIQSAEK----SDQSETIPEIGGEEDLEGEGEGEEEEEGECGFCLFMKGGGCKDSFTAWEKCIEEAEKN
        MSTSN KLQDAESN  AAA++TLED+QQSGSPI   EK    SDQS  IPE GGE+        EEEEEGECGFCLFMKGGGCKDSF  WEKCIEEAEKN
Subjt:  MSTSNPKLQDAESNAAAAASETLEDQQQSGSPIQSAEK----SDQSETIPEIGGEEDLEGEGEGEEEEEGECGFCLFMKGGGCKDSFTAWEKCIEEAEKN

Query:  KEDIVEKCFEVTGALKKCMEAHAEYYDPILKAEKMAEEEAIIEVEKEKTPDAT----QQNANSENSEKPKAASAGGK
        KEDIVEKCFEVTGALKKCMEAHA+YY+PILKAEKMAEEEAIIE+EKE TPDA     + N  S NSE+ K ASAG K
Subjt:  KEDIVEKCFEVTGALKKCMEAHAEYYDPILKAEKMAEEEAIIEVEKEKTPDAT----QQNANSENSEKPKAASAGGK

A0A6J1HUW5 uncharacterized protein LOC1114676938.7e-5374.01Show/hide
Query:  MSTSNPKLQDAESNAAAAASETLEDQQQSGSPIQSAEKS----DQSETIPEIGGEEDLEGEGEGEEEEEGECGFCLFMKGGGCKDSFTAWEKCIEEAEKN
        MSTSN KLQDAESN  AAA++TLED+QQSGSPI   EKS    DQS  IPE GGE+        EEEEEGECGFCLFMKGGGCKDSF  WEKCIEEAEKN
Subjt:  MSTSNPKLQDAESNAAAAASETLEDQQQSGSPIQSAEKS----DQSETIPEIGGEEDLEGEGEGEEEEEGECGFCLFMKGGGCKDSFTAWEKCIEEAEKN

Query:  KEDIVEKCFEVTGALKKCMEAHAEYYDPILKAEKMAEEEAIIEVEKEKTPDAT----QQNANSENSEKPKAASAGGK
        KEDIVEKCFEVTGALKKCMEAHA+YY+PILKAEKMAEEEAI+E+EKE TPDA     + N  S NSE+ K ASAG K
Subjt:  KEDIVEKCFEVTGALKKCMEAHAEYYDPILKAEKMAEEEAIIEVEKEKTPDAT----QQNANSENSEKPKAASAGGK

A0A6J1K434 uncharacterized protein LOC1114921083.7e-5170.39Show/hide
Query:  MSTSNPKLQDAESNAAAAASETLEDQQQSGSPIQSAEKSD----QSETIPEIGGEEDLEGEGEGEEEEEGECGFCLFMKGGGCKDSFTAWEKCIEEAEKN
        MSTS  KLQDAESNAAAAA++T EDQQQ G+P  S EKS     QS  I E GGE+  EG  + +EEEEGECGFCLFMKGGGC+DSF  WEKCIEEAEKN
Subjt:  MSTSNPKLQDAESNAAAAASETLEDQQQSGSPIQSAEKSD----QSETIPEIGGEEDLEGEGEGEEEEEGECGFCLFMKGGGCKDSFTAWEKCIEEAEKN

Query:  KEDIVEKCFEVTGALKKCMEAHAEYYDPILKAEKMAEEEAIIEVEKEKTPDATQQNANS---------ENSEKPKAASA
        KEDIVEKCFEVTGALKKCMEAHA+YY+PILKAEKMAE EAIIE+EKE TP+ATQQ+ +S         EN E+ KA++A
Subjt:  KEDIVEKCFEVTGALKKCMEAHAEYYDPILKAEKMAEEEAIIEVEKEKTPDATQQNANS---------ENSEKPKAASA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G14048.1 GCK domain-containing protein1.6e-0641.67Show/hide
Query:  EEEEEGECGFCLFMKGGGCKDSFTAWEKCIEEAEKNKEDIVEKCFEVTGALKKCME-AHAEYYDPILKAEKMAEEEAIIEVEKE
        EEEE+GE  F  FM+GGGCK+ FT WE C +EA             V   + KCM     ++Y P L A+K A+E     +EKE
Subjt:  EEEEEGECGFCLFMKGGGCKDSFTAWEKCIEEAEKNKEDIVEKCFEVTGALKKCME-AHAEYYDPILKAEKMAEEEAIIEVEKE

AT1G14060.1 GCK domain-containing protein1.0e-2950.91Show/hide
Query:  SNPKLQDAESNAAAAASETLEDQQQSGSPIQSAEKSDQSETIPEIGGEEDLE-----GEGEGEEEEEGECGFCLFMKGGGCKDSFTAWEKCIEEAEKNKE
        S+PK Q+ E  A  A SE L D   S +P  S E  D S    +    E  E     G G+ + EEEGECGFCLFMKGGGCKDSF AWE+C+E AEKNKE
Subjt:  SNPKLQDAESNAAAAASETLEDQQQSGSPIQSAEKSDQSETIPEIGGEEDLE-----GEGEGEEEEEGECGFCLFMKGGGCKDSFTAWEKCIEEAEKNKE

Query:  DIVEKCFEVTGALKKCMEAHAEYYDPILKAEKMAEEEAIIEVEKEKTPDATQQNANSENSEKPKA
        DIV  C EVT  LKKCM+ H++YY PIL AEK AE E   E+E EK  +  ++ +  E + K +A
Subjt:  DIVEKCFEVTGALKKCMEAHAEYYDPILKAEKMAEEEAIIEVEKEKTPDATQQNANSENSEKPKA

AT5G02210.1 GCK domain-containing protein2.3e-1351.72Show/hide
Query:  EEEEEGECGFCLFMKGGGCKDSFTAW-EKC---IEEAEKNKEDIVEKCFEVTGALKKCMEAHAEYYDPILKAEKMAEEEAIIEVEKE
        E  EE +  F  FMKGGGCK+SFTAW + C    EEAEKNK D+V KC  + G   KCM+ H++YY PIL  +K  EE     +EKE
Subjt:  EEEEEGECGFCLFMKGGGCKDSFTAW-EKC---IEEAEKNKEDIVEKCFEVTGALKKCMEAHAEYYDPILKAEKMAEEEAIIEVEKE

AT5G57570.1 GCK domain-containing protein1.6e-1440.77Show/hide
Query:  AAAASETLEDQQQSGSPIQSAEKSDQSETIPEIGGEEDLEGEGEGEEEEEGECGFCLFMKGGGCKDSFTAWEKCIEEAEKN-KEDIVEKCFEVTGALKKC
        A++ S    D+  S +  Q +   D+S T+ E   E    GEG+GEEEE GEC  C F+KGG CK+SF A E+C++EAE++ +E    KC EV    K C
Subjt:  AAAASETLEDQQQSGSPIQSAEKSDQSETIPEIGGEEDLEGEGEGEEEEEGECGFCLFMKGGGCKDSFTAWEKCIEEAEKN-KEDIVEKCFEVTGALKKC

Query:  MEAHAEYYDPILKAEKMAEEEAIIEVEKEK
        M  +  YY+PIL  E  A  + +  V   K
Subjt:  MEAHAEYYDPILKAEKMAEEEAIIEVEKEK

AT5G57640.1 GCK domain-containing protein4.1e-1035.03Show/hide
Query:  DAESNAAAAASETLEDQQQSGSPIQSAEKSDQSETIPEIGGEED----LEGEGEGEEEEEGECGFCLFMKGGGCKDSFTAWEKCIEEAEKNKEDIVEKCF
        D +  +     E   D ++S +  +      +S+T+ E  G+E+    L+ + +  EEE GEC  C F+KGG CK++FT  E C +EA+KN ED V KC 
Subjt:  DAESNAAAAASETLEDQQQSGSPIQSAEKSDQSETIPEIGGEED----LEGEGEGEEEEEGECGFCLFMKGGGCKDSFTAWEKCIEEAEKNKEDIVEKCF

Query:  EVTGALKKCMEAHAEYYDPILKAE-----KM------AEEEAIIEVEKEKTPDATQQNANSENSEK--PKAASAGGK
        E     K CM  +  YY+P+L  E     KM      AE+EAI+  E      A       EN+E   P  A+A GK
Subjt:  EVTGALKKCMEAHAEYYDPILKAE-----KM------AEEEAIIEVEKEKTPDATQQNANSENSEK--PKAASAGGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCACTTCGAATCCGAAACTCCAAGACGCTGAATCAAACGCCGCCGCCGCCGCCTCTGAAACTCTGGAGGATCAACAGCAATCGGGCTCTCCAATTCAATCTGCAGA
AAAATCTGATCAATCAGAAACGATTCCCGAAATTGGAGGCGAAGAAGATCTAGAAGGAGAAGGAGAAGGAGAAGAAGAAGAAGAGGGAGAGTGTGGGTTTTGCTTGTTTA
TGAAAGGCGGTGGTTGCAAAGACAGCTTCACAGCGTGGGAGAAATGCATTGAGGAGGCGGAGAAGAACAAGGAGGATATCGTGGAGAAGTGCTTTGAAGTGACCGGAGCT
CTCAAGAAGTGTATGGAGGCTCATGCCGAATATTACGATCCCATTCTCAAAGCCGAGAAAATGGCCGAGGAGGAGGCCATTATCGAAGTGGAGAAGGAAAAAACACCAGA
TGCTACCCAGCAAAATGCGAATTCCGAGAATTCCGAAAAACCGAAGGCGGCCTCGGCGGGTGGTAAGTGA
mRNA sequenceShow/hide mRNA sequence
AAAAGGAAAAAAGACGCGTTTTAGTCAATTGCGAGGGTTTTTGGGGTTTAAGCCGGCGGTGGAAAAGCGAACGGCCGCCTCAACAGACCCTAGAGCCGCCATTAACGCAG
CAGCCAAGCTTCGAATCCGAAGAATCCTCCGGCACCGACGAAGATGTCCACTTCGAATCCGAAACTCCAAGACGCTGAATCAAACGCCGCCGCCGCCGCCTCTGAAACTC
TGGAGGATCAACAGCAATCGGGCTCTCCAATTCAATCTGCAGAAAAATCTGATCAATCAGAAACGATTCCCGAAATTGGAGGCGAAGAAGATCTAGAAGGAGAAGGAGAA
GGAGAAGAAGAAGAAGAGGGAGAGTGTGGGTTTTGCTTGTTTATGAAAGGCGGTGGTTGCAAAGACAGCTTCACAGCGTGGGAGAAATGCATTGAGGAGGCGGAGAAGAA
CAAGGAGGATATCGTGGAGAAGTGCTTTGAAGTGACCGGAGCTCTCAAGAAGTGTATGGAGGCTCATGCCGAATATTACGATCCCATTCTCAAAGCCGAGAAAATGGCCG
AGGAGGAGGCCATTATCGAAGTGGAGAAGGAAAAAACACCAGATGCTACCCAGCAAAATGCGAATTCCGAGAATTCCGAAAAACCGAAGGCGGCCTCGGCGGGTGGTAAG
TGAAGTTTGTTGCTGTTCCTTTGGTCTGATTCTTGAGGCGAAACCATTATTTTGTTCAGAGTATTTTAGTTTCTTGTTGCTCTTGAATTCTTTGTCTTACTGCACCTTAA
GCTGATCATATTCATTTCTAAATATCATAGGAAAAGAGAGGTTTTACCTTACACCACTTATCATATGATTCTAATTTCTGAATAATTGTTCATGGCATCATTGCCGAATA
TCATTTTTCCAAGAGTCATCTTCCCTTCTACTGCTTTTGTCATTTAGATTGTGACTTCATCTGAATTTCCCTTTTCAATTGTAGTTGGAAACATGGGCA
Protein sequenceShow/hide protein sequence
MSTSNPKLQDAESNAAAAASETLEDQQQSGSPIQSAEKSDQSETIPEIGGEEDLEGEGEGEEEEEGECGFCLFMKGGGCKDSFTAWEKCIEEAEKNKEDIVEKCFEVTGA
LKKCMEAHAEYYDPILKAEKMAEEEAIIEVEKEKTPDATQQNANSENSEKPKAASAGGK