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Sed0022742 (gene) of Chayote v1 genome

Gene IDSed0022742
OrganismSechium edule (Chayote v1)
DescriptionCalmodulin
Genome locationLG10:27507455..27507970
RNA-Seq ExpressionSed0022742
SyntenySed0022742
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060899.1 putative Calcium-binding EF-hand family protein [Cucumis melo var. makuwa]9.6e-3278.02Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLIQYTKSRKYTL
        MGNSKSKTYKRVLVPFSEEQLA++FK+ D+DGDG L+KEELKQAFEYLGSRFS FR +EALRAAD +GDG I+M EM KLI+Y K+RKYT+
Subjt:  MGNSKSKTYKRVLVPFSEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLIQYTKSRKYTL

KAG6585662.1 hypothetical protein SDJN03_18395, partial [Cucurbita argyrosperma subsp. sororia]4.9e-3686.96Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLIQYTKSRKYTLC
        MGNSKSKTYKRVLVP +EEQLA IFKS D+DGDGKL+KEELKQAF YLGSRFS+FRADEALRAAD DGDG I MAEMSKLIQYTK+RKYTLC
Subjt:  MGNSKSKTYKRVLVPFSEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLIQYTKSRKYTLC

KAG6598376.1 hypothetical protein SDJN03_08154, partial [Cucurbita argyrosperma subsp. sororia]4.1e-3584.78Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLIQYTKSRKYTLC
        MGNSKSKTYKRVLVPFSEEQLAS+FK+ D DGDGKL+KEELKQAF+YLGSRFS+FR +EALRAAD DGDG I+MAEM KLIQY KSRKYTLC
Subjt:  MGNSKSKTYKRVLVPFSEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLIQYTKSRKYTLC

KAG7020569.1 hypothetical protein SDJN02_17255, partial [Cucurbita argyrosperma subsp. argyrosperma]5.6e-3279.35Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLIQYTKSRKYTLC
        MGN+KS  YKRVLVPF+EEQLA+IFKS D+DGDGKLSKEELKQAF YLGSRFS+FR  EALRAAD +GDG I+M EM+KLI+YTK RKYTLC
Subjt:  MGNSKSKTYKRVLVPFSEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLIQYTKSRKYTLC

KAG7029343.1 Calcium-binding protein CML37, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-3585.87Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLIQYTKSRKYTLC
        MGNSKSKTYKRVLVPFSEEQLAS+FK+ D DGDGKL+KEELKQAF+YLGSRFS+FR +EALRAADIDGDG I+MAEM KLIQY KSRKYTLC
Subjt:  MGNSKSKTYKRVLVPFSEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLIQYTKSRKYTLC

TrEMBL top hitse value%identityAlignment
A0A0A0LRB6 Uncharacterized protein2.3e-3176.92Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLIQYTKSRKYTL
        MGNSKSKTYKRVLVPFSEEQLA++FK+ D+DGDG L+KEELKQAFEYLGSRF  FR +EALRAAD +GDG I+M EM KLI+Y K+RKYT+
Subjt:  MGNSKSKTYKRVLVPFSEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLIQYTKSRKYTL

A0A2N9FYQ0 Uncharacterized protein2.5e-1752.87Show/hide
Query:  KSKTYKRVLVPFSEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLIQYTKSRKYTL
        K  ++KR  +PF+EEQL +IFKS D DGDGKLS++E+K+AF+YLGSR+  +RA++A+  AD D DG I   E+ KL+QY     YT+
Subjt:  KSKTYKRVLVPFSEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLIQYTKSRKYTL

A0A5A7V5B0 Putative Calcium-binding EF-hand family protein4.6e-3278.02Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLIQYTKSRKYTL
        MGNSKSKTYKRVLVPFSEEQLA++FK+ D+DGDG L+KEELKQAFEYLGSRFS FR +EALRAAD +GDG I+M EM KLI+Y K+RKYT+
Subjt:  MGNSKSKTYKRVLVPFSEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLIQYTKSRKYTL

A0A5A7VBH2 Calcium-binding EF-hand6.7e-1553.01Show/hide
Query:  YKRVLVPFSEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLIQYTKSRKYTL
        YKR  VPFS +QL  IF   D DGDG+LS+ ELK AF+ LGS +S FRA ++L+AAD DGDG +T+ E+  L+ Y   R+Y +
Subjt:  YKRVLVPFSEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLIQYTKSRKYTL

A0A7N2KRS3 Uncharacterized protein6.5e-1855.17Show/hide
Query:  KSKTYKRVLVPFSEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLIQYTKSRKYTL
        K+  +KR  VPF+E+QL +IFKS D DGDGKLS++ELK AF+YLGSR+  +R D+ALR AD + DG IT  E+ KL++Y     YT+
Subjt:  KSKTYKRVLVPFSEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLIQYTKSRKYTL

SwissProt top hitse value%identityAlignment
P11120 Calmodulin1.7e-0743.08Show/hide
Query:  SEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLI
        SEE++   FK  DKDG+G +S  EL+     LG + +    DE +R ADIDGDG I   E  K++
Subjt:  SEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLI

P24044 Calmodulin1.0e-0741.54Show/hide
Query:  SEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLI
        +EE+L   F+  D+DGDG +S +EL+     LG + +    DE +R ADIDGDG I   E  K++
Subjt:  SEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLI

P41041 Calmodulin1.7e-0741.54Show/hide
Query:  SEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLI
        SEE++   FK  DKDG+G +S  EL+     LG + +    DE +R AD+DGDG I  +E  K++
Subjt:  SEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLI

P62203 Calmodulin1.0e-0741.54Show/hide
Query:  SEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLI
        +EE+L   F+  D+DGDG +S +EL+     LG + +    DE +R ADIDGDG I   E  K++
Subjt:  SEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLI

P84339 Calmodulin1.7e-0741.54Show/hide
Query:  SEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLI
        SEE++   FK  DKDG+G +S  EL+     LG + +    DE +R AD+DGDG I   E  K++
Subjt:  SEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLI

Arabidopsis top hitse value%identityAlignment
AT1G76640.1 Calcium-binding EF-hand family protein1.7e-0740Show/hide
Query:  FSEEQ---LASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLIQ
        F EE+   L ++F   D + DG++S EELK++F+ LG + S   A+ A++ +DIDGDG + + E + LI+
Subjt:  FSEEQ---LASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLIQ

AT2G27030.3 calmodulin 55.1e-0736.11Show/hide
Query:  SEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLIQYTKSRK
        SEE+L   F+  DKD +G +S  EL+     LG + +    DE ++ AD+DGDG I   E  K++   +  K
Subjt:  SEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLIQYTKSRK

AT3G43810.1 calmodulin 73.0e-0740Show/hide
Query:  SEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLI
        SEE+L   F+  DKD +G +S  EL+     LG + +    DE +R AD+DGDG I   E  K++
Subjt:  SEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLI

AT3G51920.1 calmodulin 93.9e-0733.85Show/hide
Query:  SEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLI
        + ++L  +F+  D+DGDG +S+ EL +  + +G + +   A+  +R AD+DGDG ++  E SK++
Subjt:  SEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLI

AT5G21274.1 calmodulin 61.3e-0741.54Show/hide
Query:  SEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLI
        SEE+L   F+  DKD +G +S  EL+     LG + S    DE +R AD+DGDG I   E  K++
Subjt:  SEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAATTCCAAAAGTAAAACTTACAAACGAGTCCTTGTTCCATTCTCGGAGGAGCAACTGGCTAGCATTTTCAAGAGCTGCGATAAAGACGGAGACGGGAAGCTTTC
AAAGGAGGAGCTGAAGCAAGCCTTCGAGTATCTCGGCTCACGCTTTAGCACGTTCCGAGCCGATGAAGCTTTACGTGCCGCCGATATTGATGGGGATGGCGCCATCACCA
TGGCTGAGATGAGCAAGCTAATTCAGTATACCAAAAGTCGTAAATATACTCTTTGTTAA
mRNA sequenceShow/hide mRNA sequence
TTCTATTTAAAAAGGCCACACAGCCATACAATTCTTTCAACTCAAACAAAAATCCCATTCTCTTTCTTCTTCTGCTTTATCCTATGGGGAATTCCAAAAGTAAAACTTAC
AAACGAGTCCTTGTTCCATTCTCGGAGGAGCAACTGGCTAGCATTTTCAAGAGCTGCGATAAAGACGGAGACGGGAAGCTTTCAAAGGAGGAGCTGAAGCAAGCCTTCGA
GTATCTCGGCTCACGCTTTAGCACGTTCCGAGCCGATGAAGCTTTACGTGCCGCCGATATTGATGGGGATGGCGCCATCACCATGGCTGAGATGAGCAAGCTAATTCAGT
ATACCAAAAGTCGTAAATATACTCTTTGTTAAAATTATAGATATATATGTTTTTTTTTTTCAATTATGTCGAGTTATTTCTTGTTTATGGGTTCATGTGCGTGTACGTAT
TAATGTGTATTTTGAGGAAGGAAATAGCCCTACCTCTTTCTTAAATCATGAATAAGATTTGTTAGTTAAGGTTTAA
Protein sequenceShow/hide protein sequence
MGNSKSKTYKRVLVPFSEEQLASIFKSCDKDGDGKLSKEELKQAFEYLGSRFSTFRADEALRAADIDGDGAITMAEMSKLIQYTKSRKYTLC