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Sed0022752 (gene) of Chayote v1 genome

Gene IDSed0022752
OrganismSechium edule (Chayote v1)
DescriptionRibosomal protein L37
Genome locationLG06:45349496..45351567
RNA-Seq ExpressionSed0022752
SyntenySed0022752
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001569 - Ribosomal protein L37e
IPR011331 - Ribosomal protein L37ae/L37e
IPR011332 - Zinc-binding ribosomal protein
IPR018267 - Ribosomal protein L37e, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_019448155.1 PREDICTED: 60S ribosomal protein L37-3 [Lupinus angustifolius]1.9e-4395.79Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACA+PAARKRTYNWSVKAIRRKTTGTGRMRY+RHVPRRFKSGFREGT+AAPR KGAAASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA

XP_022150495.1 60S ribosomal protein L37-3 [Momordica charantia]1.5e-4396.84Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKR YNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGT+AAPR KGAAASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA

XP_022955411.1 60S ribosomal protein L37-3 [Cucurbita moschata]1.3e-4498.95Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPR KGAAASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA

XP_031252760.1 60S ribosomal protein L37-3 [Pistacia vera]3.9e-4497.89Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRY+RHVPRRFKSGFREGTQAAPR KGAAASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA

XP_038717722.1 60S ribosomal protein L37-3 [Tripterygium wilfordii]1.5e-4395.79Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRY+RH+PRRFKSGFREGTQAAPR KGAAA+A
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA

TrEMBL top hitse value%identityAlignment
A0A6J1D8M5 Ribosomal protein L377.1e-4496.84Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKR YNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGT+AAPR KGAAASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA

A0A6J1GTP8 Ribosomal protein L376.4e-4598.95Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPR KGAAASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA

A0A6J1IW96 Ribosomal protein L376.4e-4598.95Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPR KGAAASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA

A0A6J1KAY5 Ribosomal protein L377.1e-4496.84Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKR YNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGT+AAPR KGAAASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA

A0A7J7CYG1 Ribosomal protein L377.1e-4495.79Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRY+RH+PRRFKSGFREGTQAAPR KGAAA+A
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA

SwissProt top hitse value%identityAlignment
Q43292 60S ribosomal protein L37-23.8e-4287.37Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA
        M KGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRCSACA+PAARKRTYNWSVKAIRRKTTGTGRMRY+R+VPRRFK+GFREGT+A PR KG A+SA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA

Q8LEM8 60S ribosomal protein L37-31.3e-4287.37Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA
        MGKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRCSACA+PAARKRTYNWSVKAIRRKTTGTGRMRY+R+VPRRFK+GFREGT+A PR K +A+SA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA

Q8LFH7 60S ribosomal protein L37-16.4e-4287.37Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA
        MGKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRCSACA+PAARKRTYNWSVKAIRRKTTGTGRMRY+R+VPRRFK+ FREGTQA PR K AA+S+
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA

Q90YT1 60S ribosomal protein L373.6e-2967.37Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA
        M KGT SFGKRRNKTHTLC RCG +++HLQKS C  C +PA RKR YNWS KA RR TTGTGRMR+M+ V RRF++GFREGT   PR    AAS+
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA

Q9VXX8 Probable 60S ribosomal protein L37-A9.6e-3070.11Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPR
        M KGT SFGKR NKTHTLC RCGR S+H+QKS C+ C +PAA+ R+YNWSVKA RRKTTGTGRM++++ V RRF++GFREGTQA P+
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPR

Arabidopsis top hitse value%identityAlignment
AT1G15250.1 Zinc-binding ribosomal protein family protein4.6e-4387.37Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA
        MGKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRCSACA+PAARKRTYNWSVKAIRRKTTGTGRMRY+R+VPRRFK+ FREGTQA PR K AA+S+
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA

AT1G52300.1 Zinc-binding ribosomal protein family protein2.7e-4387.37Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA
        M KGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRCSACA+PAARKRTYNWSVKAIRRKTTGTGRMRY+R+VPRRFK+GFREGT+A PR KG A+SA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA

AT3G16080.1 Zinc-binding ribosomal protein family protein9.2e-4487.37Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA
        MGKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRCSACA+PAARKRTYNWSVKAIRRKTTGTGRMRY+R+VPRRFK+GFREGT+A PR K +A+SA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAGGGAACGGGAAGTTTTGGTAAGAGGAGGAACAAGACCCACACTCTGTGTGTTAGGTGTGGCCGCCGGAGTTTCCACCTGCAGAAGAGTCGGTGCTCCGCTTG
CGCATTTCCGGCCGCCCGTAAGCGAACATATAACTGGAGTGTGAAGGCGATCAGGAGAAAGACCACTGGAACTGGACGGATGAGATACATGCGCCATGTTCCTCGTAGAT
TTAAGAGTGGTTTCAGAGAAGGTACTCAAGCAGCACCAAGGATCAAAGGAGCGGCTGCATCAGCCTAA
mRNA sequenceShow/hide mRNA sequence
CCTAAACCCTCGCAATATTAAGTCTGCCGCTCACATTTGAGCCCTCTTTGAATTCCATTGTTTCATCGTCAAATTCGATCAAATGGGAAAGGGAACGGGAAGTTTTGGTA
AGAGGAGGAACAAGACCCACACTCTGTGTGTTAGGTGTGGCCGCCGGAGTTTCCACCTGCAGAAGAGTCGGTGCTCCGCTTGCGCATTTCCGGCCGCCCGTAAGCGAACA
TATAACTGGAGTGTGAAGGCGATCAGGAGAAAGACCACTGGAACTGGACGGATGAGATACATGCGCCATGTTCCTCGTAGATTTAAGAGTGGTTTCAGAGAAGGTACTCA
AGCAGCACCAAGGATCAAAGGAGCGGCTGCATCAGCCTAAAACATTGAAGGTTAATTGTGGCTCAGCTTTGGTGCTTTATAGTAGCTTTTAGGAGGATCTTGTCAATTTC
TTACCAGAATTTATATGAATTTTGTTTGAAGATGTTATTGCATTCACTCTTTTTTATTTCTTACTATTTCGGTTACGAGATTTCTTAAGATTAGATTCAGACTGCTTTCA
CCTTTCGTTAATCTATATGACTTGAGTTATACA
Protein sequenceShow/hide protein sequence
MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTQAAPRIKGAAASA