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Sed0022774 (gene) of Chayote v1 genome

Gene IDSed0022774
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG03:8111264..8118044
RNA-Seq ExpressionSed0022774
SyntenySed0022774
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647791.1 hypothetical protein Csa_004224 [Cucumis sativus]1.4e-4887.18Show/hide
Query:  MNNMRCQHCAGPLSKNMETSAWNIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIIFSSACAGMTGGALPALAQLVSSS
        M+NMRCQHCAGPLSK+METSAW IPPLIRDSFSMIGSAVGGTASAFYGFN+VMPVVQRSVKGPMWLHFLIGAPPVIIFSSACAGMTGGA+PALAQLV+SS
Subjt:  MNNMRCQHCAGPLSKNMETSAWNIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIIFSSACAGMTGGALPALAQLVSSS

Query:  YHSAVSPSSLSSSKNDK
        YHS       SSS++DK
Subjt:  YHSAVSPSSLSSSKNDK

XP_008455891.1 PREDICTED: uncharacterized protein LOC103495968 [Cucumis melo]1.4e-4886.44Show/hide
Query:  MNNMRCQHCAGPLSKNMETSAWNIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIIFSSACAGMTGGALPALAQLVSSS
        M+NMRCQHCAGPLSK+METSAW IPPLIRDSFSMIGSAVGGTASAFYGFN VMPVVQRSVKGPMWLHFLIGAPPVI+FSSACAGMTGGA+PALAQLV+SS
Subjt:  MNNMRCQHCAGPLSKNMETSAWNIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIIFSSACAGMTGGALPALAQLVSSS

Query:  YHSAVSPSSLSSSKNDKN
        YHS       SSSK+DK+
Subjt:  YHSAVSPSSLSSSKNDKN

XP_011658376.1 uncharacterized protein LOC105435977 isoform X1 [Cucumis sativus]1.4e-4887.18Show/hide
Query:  MNNMRCQHCAGPLSKNMETSAWNIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIIFSSACAGMTGGALPALAQLVSSS
        M+NMRCQHCAGPLSK+METSAW IPPLIRDSFSMIGSAVGGTASAFYGFN+VMPVVQRSVKGPMWLHFLIGAPPVIIFSSACAGMTGGA+PALAQLV+SS
Subjt:  MNNMRCQHCAGPLSKNMETSAWNIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIIFSSACAGMTGGALPALAQLVSSS

Query:  YHSAVSPSSLSSSKNDK
        YHS       SSS++DK
Subjt:  YHSAVSPSSLSSSKNDK

XP_022925022.1 uncharacterized protein LOC111432392 [Cucurbita moschata]1.3e-4987.93Show/hide
Query:  NNMRCQHCAGPLSKNMETSAWNIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIIFSSACAGMTGGALPALAQLVSSSY
        +NMRCQHCAGPLSK+METSAW IPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVI+FSSACAGM GGA+PALAQL SSSY
Subjt:  NNMRCQHCAGPLSKNMETSAWNIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIIFSSACAGMTGGALPALAQLVSSSY

Query:  HSAVSPSSLSSSKNDK
        HSA+SP     SK+DK
Subjt:  HSAVSPSSLSSSKNDK

XP_022966472.1 uncharacterized protein LOC111466117 [Cucurbita maxima]3.8e-4987.07Show/hide
Query:  NNMRCQHCAGPLSKNMETSAWNIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIIFSSACAGMTGGALPALAQLVSSSY
        +N+RCQHCAGPLSK+METSAW IPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVI+FSSACAGM GGA+PALAQL SSSY
Subjt:  NNMRCQHCAGPLSKNMETSAWNIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIIFSSACAGMTGGALPALAQLVSSSY

Query:  HSAVSPSSLSSSKNDK
        HSA+SP     SK+DK
Subjt:  HSAVSPSSLSSSKNDK

TrEMBL top hitse value%identityAlignment
A0A1S4E0V5 uncharacterized protein LOC1034959687.0e-4986.44Show/hide
Query:  MNNMRCQHCAGPLSKNMETSAWNIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIIFSSACAGMTGGALPALAQLVSSS
        M+NMRCQHCAGPLSK+METSAW IPPLIRDSFSMIGSAVGGTASAFYGFN VMPVVQRSVKGPMWLHFLIGAPPVI+FSSACAGMTGGA+PALAQLV+SS
Subjt:  MNNMRCQHCAGPLSKNMETSAWNIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIIFSSACAGMTGGALPALAQLVSSS

Query:  YHSAVSPSSLSSSKNDKN
        YHS       SSSK+DK+
Subjt:  YHSAVSPSSLSSSKNDKN

A0A6J1D6Q7 uncharacterized protein LOC111018136 isoform X22.7e-4888.07Show/hide
Query:  MNNMRCQHCAGPLSKNMETSAWNIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIIFSSACAGMTGGALPALAQLVSSS
        M+NMRCQHCAGPLSK+METSAW IPPLIRDSFSMIGSAVGGTASAFYGFNHVMP+V+RSVKGPMWLHFLIGAPPVI+FSSACAGM GG +PALAQL S+S
Subjt:  MNNMRCQHCAGPLSKNMETSAWNIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIIFSSACAGMTGGALPALAQLVSSS

Query:  YHSAVSPSS
        YHSAV  SS
Subjt:  YHSAVSPSS

A0A6J1D7Q1 uncharacterized protein LOC111018136 isoform X12.7e-4888.07Show/hide
Query:  MNNMRCQHCAGPLSKNMETSAWNIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIIFSSACAGMTGGALPALAQLVSSS
        M+NMRCQHCAGPLSK+METSAW IPPLIRDSFSMIGSAVGGTASAFYGFNHVMP+V+RSVKGPMWLHFLIGAPPVI+FSSACAGM GG +PALAQL S+S
Subjt:  MNNMRCQHCAGPLSKNMETSAWNIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIIFSSACAGMTGGALPALAQLVSSS

Query:  YHSAVSPSS
        YHSAV  SS
Subjt:  YHSAVSPSS

A0A6J1EAN3 uncharacterized protein LOC1114323926.3e-5087.93Show/hide
Query:  NNMRCQHCAGPLSKNMETSAWNIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIIFSSACAGMTGGALPALAQLVSSSY
        +NMRCQHCAGPLSK+METSAW IPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVI+FSSACAGM GGA+PALAQL SSSY
Subjt:  NNMRCQHCAGPLSKNMETSAWNIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIIFSSACAGMTGGALPALAQLVSSSY

Query:  HSAVSPSSLSSSKNDK
        HSA+SP     SK+DK
Subjt:  HSAVSPSSLSSSKNDK

A0A6J1HN28 uncharacterized protein LOC1114661171.8e-4987.07Show/hide
Query:  NNMRCQHCAGPLSKNMETSAWNIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIIFSSACAGMTGGALPALAQLVSSSY
        +N+RCQHCAGPLSK+METSAW IPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVI+FSSACAGM GGA+PALAQL SSSY
Subjt:  NNMRCQHCAGPLSKNMETSAWNIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIIFSSACAGMTGGALPALAQLVSSSY

Query:  HSAVSPSSLSSSKNDK
        HSA+SP     SK+DK
Subjt:  HSAVSPSSLSSSKNDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G41945.1 unknown protein3.8e-1536.11Show/hide
Query:  MNNMRCQHCAGPLSKNMETSAWNIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIIFSSACAGMTGGALPALAQLVSSS
        + + RC  C   L+ N E   W I P++ D+ ++ GS +GG  SA + FN  +P +Q    G   L FL+G P ++++S   A   G ALP  AQL  +S
Subjt:  MNNMRCQHCAGPLSKNMETSAWNIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIIFSSACAGMTGGALPALAQLVSSS

Query:  YHSAVSPS
        Y+++ S S
Subjt:  YHSAVSPS

AT2G41945.2 unknown protein3.8e-1536.11Show/hide
Query:  MNNMRCQHCAGPLSKNMETSAWNIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIIFSSACAGMTGGALPALAQLVSSS
        + + RC  C   L+ N E   W I P++ D+ ++ GS +GG  SA + FN  +P +Q    G   L FL+G P ++++S   A   G ALP  AQL  +S
Subjt:  MNNMRCQHCAGPLSKNMETSAWNIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIIFSSACAGMTGGALPALAQLVSSS

Query:  YHSAVSPS
        Y+++ S S
Subjt:  YHSAVSPS

AT2G41945.3 unknown protein3.7e-1028.08Show/hide
Query:  MNNMRCQHCAGPLSKNMETSAWNIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIIFS---------------------
        + + RC  C   L+ N E   W I P++ D+ ++ GS +GG  SA + FN  +P +Q    G   L FL+G P ++++S                     
Subjt:  MNNMRCQHCAGPLSKNMETSAWNIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIIFS---------------------

Query:  ---SACAG--------------MTGGALPALAQLVSSSYHSAVSPS
           S CA               + G ALP  AQL  +SY+++ S S
Subjt:  ---SACAG--------------MTGGALPALAQLVSSSYHSAVSPS

AT3G04040.1 unknown protein7.4e-4371.93Show/hide
Query:  RCQHCAGPLSKNMETSAWNIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIIFSSACAGMTGGALPALAQLVSSSYHSA
        RC HCAGPL+KN+ET+ W + P IRDSFSMIGSAVGGTASAF GF+HVMP+V++ +KGPMWLHFL+GAPPVI+ SSACAG+ GGA+PALAQL SSSYH+A
Subjt:  RCQHCAGPLSKNMETSAWNIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIIFSSACAGMTGGALPALAQLVSSSYHSA

Query:  VSPSSLSSSKNDKN
        V  SS      DKN
Subjt:  VSPSSLSSSKNDKN

AT5G18250.1 unknown protein4.8e-4268.14Show/hide
Query:  MRCQHCAGPLSKNMETSAWNIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIIFSSACAGMTGGALPALAQLVSSSYHS
        +RC HCAGPL++N+ETS W + P IRDSFSMIGSAVGGTASAF GFNH MP+V++ +KGPMWLHFL+GAPPVI+ SSACAG+ GG +PALAQL SSSY +
Subjt:  MRCQHCAGPLSKNMETSAWNIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIIFSSACAGMTGGALPALAQLVSSSYHS

Query:  AVSPSSLSSSKND
        AV  S    ++ D
Subjt:  AVSPSSLSSSKND


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATAATATGAGATGTCAACACTGTGCGGGTCCTCTTTCAAAGAATATGGAAACCAGTGCCTGGAATATTCCTCCTCTTATTAGGGATAGTTTCTCTATGATTGGCTC
TGCTGTTGGTGGTACTGCTAGTGCTTTCTATGGATTTAACCACGTGATGCCTGTTGTCCAGAGATCAGTGAAAGGGCCAATGTGGTTGCATTTTCTTATTGGTGCTCCTC
CTGTGATTATATTTTCTTCAGCTTGCGCAGGAATGACTGGTGGTGCTCTTCCAGCTTTGGCCCAACTTGTTTCTTCATCTTATCATTCAGCGGTCTCTCCTTCCTCATTA
TCATCTTCAAAAAATGATAAGAATTAG
mRNA sequenceShow/hide mRNA sequence
TTAAATAATATATCAATTGGAAAAAAAAAGTGGAAAACCTTGCTCAATTTCTTCTTCTTCCCGACGTCTCCTCCTCCTCCTCCTCCTCTGTTTCTGCAGAGCTCAATATC
GCCGCCGTTTCCTCTTTCCGGTAAGTTCCGCCGCCGCCGCCGCCAGTCGTCCTTTCCGTTCGTGCCGCCGCCGCCTCACTCGATTTCCTTCTTTCTTAAGGGAAGAATTG
TGTTAGCAAGGAGATAGTCAAGATAAAGCAACAAGGATAGGGCGATAGCAACCTTATTAGATGAATAATATGAGATGTCAACACTGTGCGGGTCCTCTTTCAAAGAATAT
GGAAACCAGTGCCTGGAATATTCCTCCTCTTATTAGGGATAGTTTCTCTATGATTGGCTCTGCTGTTGGTGGTACTGCTAGTGCTTTCTATGGATTTAACCACGTGATGC
CTGTTGTCCAGAGATCAGTGAAAGGGCCAATGTGGTTGCATTTTCTTATTGGTGCTCCTCCTGTGATTATATTTTCTTCAGCTTGCGCAGGAATGACTGGTGGTGCTCTT
CCAGCTTTGGCCCAACTTGTTTCTTCATCTTATCATTCAGCGGTCTCTCCTTCCTCATTATCATCTTCAAAAAATGATAAGAATTAGGACTCAAGGTCATCTACTACCTT
ATAATGCTATTATACGAAATTAAAATATCATTTTGATCTTGTACTTTAGGCTCGGTTCTCTTTTGATCCACGTACTTTTAAATGTCTAATTTGAGTATTATATTTTTAAT
AATGTTAAAAAGTAGTCTATGTTAAATTCCATTTTTAACTTCTT
Protein sequenceShow/hide protein sequence
MNNMRCQHCAGPLSKNMETSAWNIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIIFSSACAGMTGGALPALAQLVSSSYHSAVSPSSL
SSSKNDKN