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Sed0022793 (gene) of Chayote v1 genome

Gene IDSed0022793
OrganismSechium edule (Chayote v1)
DescriptionLEA_2 domain-containing protein
Genome locationLG06:45326210..45326542
RNA-Seq ExpressionSed0022793
SyntenySed0022793
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ESR40256.1 hypothetical protein CICLE_v10026796mg [Citrus clementina]2.5e-1046.32Show/hide
Query:  CSGGGDRGY-TVVAFMGRIPAAAAARWKEMWRRVKR---RMLWC-GGAREVHVAYNPVTYLQNFDEGSLTMVENDPDAISRSFSARFAISSAILQ
        C     RGY  V++F G I  +   RW+ +WR++KR   R+  C  G+  VHV Y+P TY QNFD+G    V  DPD  SRSFSARFA+ S + Q
Subjt:  CSGGGDRGY-TVVAFMGRIPAAAAARWKEMWRRVKR---RMLWC-GGAREVHVAYNPVTYLQNFDEGSLTMVENDPDAISRSFSARFAISSAILQ

GAY51209.1 hypothetical protein CUMW_132530 [Citrus unshiu]1.5e-1046.32Show/hide
Query:  CSGGGDRGY-TVVAFMGRIPAAAAARWKEMWRRVKR---RMLWC-GGAREVHVAYNPVTYLQNFDEGSLTMVENDPDAISRSFSARFAISSAILQ
        C     RGY  V++F G I  +   RW+ +WR++KR   R+  C  G  +VHV Y+P TY QNFD+G    V  DPD  SRSFSARFA+ S + Q
Subjt:  CSGGGDRGY-TVVAFMGRIPAAAAARWKEMWRRVKR---RMLWC-GGAREVHVAYNPVTYLQNFDEGSLTMVENDPDAISRSFSARFAISSAILQ

KAG6606769.1 hypothetical protein SDJN03_00111, partial [Cucurbita argyrosperma subsp. sororia]1.0e-1957.8Show/hide
Query:  VDLSSLRCSGGG----DRGYTVVAFMGRIPAAAAARWKEMWRRV---KRRMLWCG--GAREVHVAYNPVTYLQNFDEGSLTMV-ENDPDAISRSFSARFA
        ++LS LR +GGG    +RGY   A    +     +RW+ +WRR+   K+RM  CG  GAREVHV YNP TYLQNFD+GS+ MV ++DPDAISRSFSARFA
Subjt:  VDLSSLRCSGGG----DRGYTVVAFMGRIPAAAAARWKEMWRRV---KRRMLWCG--GAREVHVAYNPVTYLQNFDEGSLTMV-ENDPDAISRSFSARFA

Query:  ISSAILQTP
        ISSAIL+ P
Subjt:  ISSAILQTP

KAG7036482.1 hypothetical protein SDJN02_00099, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-2058.72Show/hide
Query:  VDLSSLRCSGGG----DRGYTVVAFMGRIPAAAAARWKEMWRRV---KRRMLWCG--GAREVHVAYNPVTYLQNFDEGSLTMV-ENDPDAISRSFSARFA
        ++LS LR +GGG    +RGY   A    +     ARW+ +WRR+   K+RM  CG  GAREVHV YNP TYLQNFD+GS+ MV ++DPDAISRSFSARFA
Subjt:  VDLSSLRCSGGG----DRGYTVVAFMGRIPAAAAARWKEMWRRV---KRRMLWCG--GAREVHVAYNPVTYLQNFDEGSLTMV-ENDPDAISRSFSARFA

Query:  ISSAILQTP
        ISSAIL+ P
Subjt:  ISSAILQTP

KDO51221.1 hypothetical protein CISIN_1g044132mg [Citrus sinensis]1.9e-1046.32Show/hide
Query:  CSGGGDRGY-TVVAFMGRIPAAAAARWKEMWRRVKR---RMLWC-GGAREVHVAYNPVTYLQNFDEGSLTMVENDPDAISRSFSARFAISSAILQ
        C     RGY  V++F G I  +   RW+ +WR++KR   R+  C  G+  VHV Y+P TY QNFD+G    V  DPD  SRSFSARFA+ S + Q
Subjt:  CSGGGDRGY-TVVAFMGRIPAAAAARWKEMWRRVKR---RMLWC-GGAREVHVAYNPVTYLQNFDEGSLTMVENDPDAISRSFSARFAISSAILQ

TrEMBL top hitse value%identityAlignment
A0A067EJZ4 Uncharacterized protein9.2e-1146.32Show/hide
Query:  CSGGGDRGY-TVVAFMGRIPAAAAARWKEMWRRVKR---RMLWC-GGAREVHVAYNPVTYLQNFDEGSLTMVENDPDAISRSFSARFAISSAILQ
        C     RGY  V++F G I  +   RW+ +WR++KR   R+  C  G+  VHV Y+P TY QNFD+G    V  DPD  SRSFSARFA+ S + Q
Subjt:  CSGGGDRGY-TVVAFMGRIPAAAAARWKEMWRRVKR---RMLWC-GGAREVHVAYNPVTYLQNFDEGSLTMVENDPDAISRSFSARFAISSAILQ

A0A1R3G7T7 Uncharacterized protein1.7e-0950.75Show/hide
Query:  RWKEMWR---RVKRRMLWCGGAREVHVAYNPVTYLQNFDEGSLTMVENDPDAISRSFSARFAISSAI
        RW+ +WR   R KR++  C  +  VHV+Y+P TY QNFD+G   ++  DPD +SRSFSARFA+SS +
Subjt:  RWKEMWR---RVKRRMLWCGGAREVHVAYNPVTYLQNFDEGSLTMVENDPDAISRSFSARFAISSAI

A0A2H5PFR9 Uncharacterized protein7.0e-1146.32Show/hide
Query:  CSGGGDRGY-TVVAFMGRIPAAAAARWKEMWRRVKR---RMLWC-GGAREVHVAYNPVTYLQNFDEGSLTMVENDPDAISRSFSARFAISSAILQ
        C     RGY  V++F G I  +   RW+ +WR++KR   R+  C  G  +VHV Y+P TY QNFD+G    V  DPD  SRSFSARFA+ S + Q
Subjt:  CSGGGDRGY-TVVAFMGRIPAAAAARWKEMWRRVKR---RMLWC-GGAREVHVAYNPVTYLQNFDEGSLTMVENDPDAISRSFSARFAISSAILQ

A0A6J1BGX9 uncharacterized protein LOC1104275353.9e-0947.83Show/hide
Query:  RWKEMWR---RVKRRMLWCGGAREVHVAYNPVTYLQNFDEGSLTMVENDPDAISRSFSARFAISSAILQ
        RW+ +WR   R K+++  C  +  VHV+Y+P TY QNFD+G   ++  DPD +SRSFSARFA+ S +L+
Subjt:  RWKEMWR---RVKRRMLWCGGAREVHVAYNPVTYLQNFDEGSLTMVENDPDAISRSFSARFAISSAILQ

V4ST02 Uncharacterized protein1.2e-1046.32Show/hide
Query:  CSGGGDRGY-TVVAFMGRIPAAAAARWKEMWRRVKR---RMLWC-GGAREVHVAYNPVTYLQNFDEGSLTMVENDPDAISRSFSARFAISSAILQ
        C     RGY  V++F G I  +   RW+ +WR++KR   R+  C  G+  VHV Y+P TY QNFD+G    V  DPD  SRSFSARFA+ S + Q
Subjt:  CSGGGDRGY-TVVAFMGRIPAAAAARWKEMWRRVKR---RMLWC-GGAREVHVAYNPVTYLQNFDEGSLTMVENDPDAISRSFSARFAISSAILQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G25735.1 unknown protein4.8e-0435.14Show/hide
Query:  RWKEMWRRVKRRMLWCGGAREVHVAYNPVTYLQNFDEGSLTMVENDPDAISRSFSARFAISSAILQTPNQFVLH
        +WK +  ++K  +L    +    VAY P  Y  NFD+G      ++P+ +SRSFS RFA  + I +T  +F+L+
Subjt:  RWKEMWRRVKRRMLWCGGAREVHVAYNPVTYLQNFDEGSLTMVENDPDAISRSFSARFAISSAILQTPNQFVLH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCCCACCGTGGATTTAAGTTCTTTAAGATGCTCCGGCGGCGGCGACCGTGGGTACACCGTGGTGGCGTTTATGGGGCGGATCCCGGCGGCGGCGGCGGCGAGATG
GAAGGAAATGTGGCGGAGGGTGAAGAGGAGAATGTTGTGGTGCGGCGGGGCACGTGAGGTGCACGTGGCGTACAATCCAGTGACGTATTTGCAGAATTTTGATGAAGGTT
CATTAACAATGGTGGAAAACGATCCTGATGCGATTTCTCGATCTTTCTCTGCTCGTTTTGCAATTTCTTCTGCCATTTTACAAACGCCCAATCAATTTGTGCTTCACAAT
TAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGCCCACCGTGGATTTAAGTTCTTTAAGATGCTCCGGCGGCGGCGACCGTGGGTACACCGTGGTGGCGTTTATGGGGCGGATCCCGGCGGCGGCGGCGGCGAGATG
GAAGGAAATGTGGCGGAGGGTGAAGAGGAGAATGTTGTGGTGCGGCGGGGCACGTGAGGTGCACGTGGCGTACAATCCAGTGACGTATTTGCAGAATTTTGATGAAGGTT
CATTAACAATGGTGGAAAACGATCCTGATGCGATTTCTCGATCTTTCTCTGCTCGTTTTGCAATTTCTTCTGCCATTTTACAAACGCCCAATCAATTTGTGCTTCACAAT
TAA
Protein sequenceShow/hide protein sequence
MQPTVDLSSLRCSGGGDRGYTVVAFMGRIPAAAAARWKEMWRRVKRRMLWCGGAREVHVAYNPVTYLQNFDEGSLTMVENDPDAISRSFSARFAISSAILQTPNQFVLHN