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Sed0022797 (gene) of Chayote v1 genome

Gene IDSed0022797
OrganismSechium edule (Chayote v1)
Descriptionlate embryogenesis abundant protein 6-like
Genome locationLG02:51260518..51261596
RNA-Seq ExpressionSed0022797
SyntenySed0022797
Gene Ontology termsGO:0009793 - embryo development ending in seed dormancy (biological process)
InterPro domainsIPR005513 - Late embryogenesis abundant protein, LEA_1 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134355.1 late embryogenesis abundant protein 6 [Cucumis sativus]2.3e-3074.34Show/hide
Query:  MQAVRDKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRMAREAEAAMDLHVAKAGMKAEKEMAKFSDPPSGSFVPPGATAAAPNVAVP--PSATI
        MQAVR+KLHD+SVMRKAKAEAKAEEKAEKELAKARVEVAHEVR+AREAEAAMDLHVAKAGMKAEKEMAK++D  + +FV PG T   P+ +VP  P  T+
Subjt:  MQAVRDKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRMAREAEAAMDLHVAKAGMKAEKEMAKFSDPPSGSFVPPGATAAAPNVAVP--PSATI

Query:  IRAPGADDKAEAP
        + APG  D A AP
Subjt:  IRAPGADDKAEAP

XP_008438228.1 PREDICTED: uncharacterized protein LOC103483397 [Cucumis melo]8.7e-3073.04Show/hide
Query:  MQAVRDKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRMAREAEAAMDLHVAKAGMKAEKEMAKFSDPPSGSFVPPGATAAAP----NVAVPPSA
        MQAV++KLHD+SVMRKAKAEAKAEEKAEKELAKARVEVAHEVR+AREAEAAMDLHVAKAGMKAEKEMAK++D  + +FV PG T   P    NV V P  
Subjt:  MQAVRDKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRMAREAEAAMDLHVAKAGMKAEKEMAKFSDPPSGSFVPPGATAAAP----NVAVPPSA

Query:  TIIRAPGADDKAEAP
        T++ APG  D A AP
Subjt:  TIIRAPGADDKAEAP

XP_022924652.1 late embryogenesis abundant protein 6-like [Cucurbita moschata]6.5e-2570.37Show/hide
Query:  MQAVRDKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRMAREAEAAMDLHVAKAGMKAEKEMAKFSDPPSGSFVPPGATAAAPNVAVPPSATIIR
        MQAVRDKLHDI+ MRKAK+EAKAEEKAEKELAKARVEVAHEVR+AREAEAAM LHVAKAG +AEKEMAK ++  +  FV PG      NVA  P  T++ 
Subjt:  MQAVRDKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRMAREAEAAMDLHVAKAGMKAEKEMAKFSDPPSGSFVPPGATAAAPNVAVPPSATIIR

Query:  APGADDKA
        APG  D A
Subjt:  APGADDKA

XP_022980446.1 late embryogenesis abundant protein 6-like [Cucurbita maxima]1.1e-2470.75Show/hide
Query:  MQAVRDKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRMAREAEAAMDLHVAKAGMKAEKEMAKFSDPPSGSFVPPGATAAAPNVAVPPSATIIR
        MQAVRDKLHDI+ MRKAK+EAKAEEKAEKELAKARVEVAHEVR+AREAEAAM LHVAKAG +AEKEMAK ++  +  FV PG      NVA  P  T++ 
Subjt:  MQAVRDKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRMAREAEAAMDLHVAKAGMKAEKEMAKFSDPPSGSFVPPGATAAAPNVAVPPSATIIR

Query:  APGADD
        APG  D
Subjt:  APGADD

XP_038878054.1 late embryogenesis abundant protein 6-like [Benincasa hispida]5.1e-3073.91Show/hide
Query:  MQAVRDKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRMAREAEAAMDLHVAKAGMKAEKEMAKFSDPPSGSFVPPGATAA---APNVAVPPSAT
        MQAV+DKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVR+AREAEAAMDLHVAKAGMKAEKEM K+++  + +FV PG TAA     ++AV P  T
Subjt:  MQAVRDKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRMAREAEAAMDLHVAKAGMKAEKEMAKFSDPPSGSFVPPGATAA---APNVAVPPSAT

Query:  IIRAPGADDKAEAPP
        I+ APG  + A APP
Subjt:  IIRAPGADDKAEAPP

TrEMBL top hitse value%identityAlignment
A0A0A0L6I7 Uncharacterized protein1.1e-3074.34Show/hide
Query:  MQAVRDKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRMAREAEAAMDLHVAKAGMKAEKEMAKFSDPPSGSFVPPGATAAAPNVAVP--PSATI
        MQAVR+KLHD+SVMRKAKAEAKAEEKAEKELAKARVEVAHEVR+AREAEAAMDLHVAKAGMKAEKEMAK++D  + +FV PG T   P+ +VP  P  T+
Subjt:  MQAVRDKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRMAREAEAAMDLHVAKAGMKAEKEMAKFSDPPSGSFVPPGATAAAPNVAVP--PSATI

Query:  IRAPGADDKAEAP
        + APG  D A AP
Subjt:  IRAPGADDKAEAP

A0A1S3AWI7 uncharacterized protein LOC1034833974.2e-3073.04Show/hide
Query:  MQAVRDKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRMAREAEAAMDLHVAKAGMKAEKEMAKFSDPPSGSFVPPGATAAAP----NVAVPPSA
        MQAV++KLHD+SVMRKAKAEAKAEEKAEKELAKARVEVAHEVR+AREAEAAMDLHVAKAGMKAEKEMAK++D  + +FV PG T   P    NV V P  
Subjt:  MQAVRDKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRMAREAEAAMDLHVAKAGMKAEKEMAKFSDPPSGSFVPPGATAAAP----NVAVPPSA

Query:  TIIRAPGADDKAEAP
        T++ APG  D A AP
Subjt:  TIIRAPGADDKAEAP

A0A5A7U624 Late embryogenesis abundant protein4.2e-3073.04Show/hide
Query:  MQAVRDKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRMAREAEAAMDLHVAKAGMKAEKEMAKFSDPPSGSFVPPGATAAAP----NVAVPPSA
        MQAV++KLHD+SVMRKAKAEAKAEEKAEKELAKARVEVAHEVR+AREAEAAMDLHVAKAGMKAEKEMAK++D  + +FV PG T   P    NV V P  
Subjt:  MQAVRDKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRMAREAEAAMDLHVAKAGMKAEKEMAKFSDPPSGSFVPPGATAAAP----NVAVPPSA

Query:  TIIRAPGADDKAEAP
        T++ APG  D A AP
Subjt:  TIIRAPGADDKAEAP

A0A6J1ED39 late embryogenesis abundant protein 6-like3.1e-2570.37Show/hide
Query:  MQAVRDKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRMAREAEAAMDLHVAKAGMKAEKEMAKFSDPPSGSFVPPGATAAAPNVAVPPSATIIR
        MQAVRDKLHDI+ MRKAK+EAKAEEKAEKELAKARVEVAHEVR+AREAEAAM LHVAKAG +AEKEMAK ++  +  FV PG      NVA  P  T++ 
Subjt:  MQAVRDKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRMAREAEAAMDLHVAKAGMKAEKEMAKFSDPPSGSFVPPGATAAAPNVAVPPSATIIR

Query:  APGADDKA
        APG  D A
Subjt:  APGADDKA

A0A6J1IRE5 late embryogenesis abundant protein 6-like5.3e-2570.75Show/hide
Query:  MQAVRDKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRMAREAEAAMDLHVAKAGMKAEKEMAKFSDPPSGSFVPPGATAAAPNVAVPPSATIIR
        MQAVRDKLHDI+ MRKAK+EAKAEEKAEKELAKARVEVAHEVR+AREAEAAM LHVAKAG +AEKEMAK ++  +  FV PG      NVA  P  T++ 
Subjt:  MQAVRDKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRMAREAEAAMDLHVAKAGMKAEKEMAKFSDPPSGSFVPPGATAAAPNVAVPPSATIIR

Query:  APGADD
        APG  D
Subjt:  APGADD

SwissProt top hitse value%identityAlignment
Q39138 Late embryogenesis abundant protein 61.0e-0442.71Show/hide
Query:  MQAVRDKLHDISVMRKAK---AEAKAEEKAEKELA--KARVEVAHEVRMAREAEAAMDLHVAKAGMKAEKEMAKFSD---PPSGSFVPPGATAAAP
        MQ+ + K+ D++   K K    +AKA+EKAE+ +A  K   E+AH+ R A+EAEA MD+H+AKA    +K MAK S       G  VP  A   AP
Subjt:  MQAVRDKLHDISVMRKAK---AEAKAEEKAEKELA--KARVEVAHEVRMAREAEAAMDLHVAKAGMKAEKEMAKFSD---PPSGSFVPPGATAAAP

Arabidopsis top hitse value%identityAlignment
AT1G32560.1 Late embryogenesis abundant protein, group 1 protein7.2e-0642.71Show/hide
Query:  MQAVRDKLHDISVMRKAK---AEAKAEEKAEKELA--KARVEVAHEVRMAREAEAAMDLHVAKAGMKAEKEMAKFSD---PPSGSFVPPGATAAAP
        MQ+ + K+ D++   K K    +AKA+EKAE+ +A  K   E+AH+ R A+EAEA MD+H+AKA    +K MAK S       G  VP  A   AP
Subjt:  MQAVRDKLHDISVMRKAK---AEAKAEEKAEKELA--KARVEVAHEVRMAREAEAAMDLHVAKAGMKAEKEMAKFSD---PPSGSFVPPGATAAAP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGCTGTGAGGGATAAACTACATGATATCAGTGTCATGCGTAAAGCCAAGGCCGAGGCAAAGGCCGAAGAGAAGGCTGAAAAGGAGCTAGCAAAGGCAAGAGTGGA
AGTGGCTCATGAGGTAAGAATGGCAAGAGAAGCTGAAGCTGCCATGGATCTTCATGTGGCCAAAGCTGGAATGAAGGCTGAGAAAGAAATGGCTAAGTTTTCCGACCCTC
CGTCCGGTTCCTTCGTGCCTCCCGGCGCCACTGCCGCCGCTCCCAATGTGGCTGTGCCTCCGAGCGCGACTATCATCAGAGCCCCTGGCGCCGACGACAAGGCGGAAGCT
CCTCCCTCTAAGCACTTCATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGGCTGTGAGGGATAAACTACATGATATCAGTGTCATGCGTAAAGCCAAGGCCGAGGCAAAGGCCGAAGAGAAGGCTGAAAAGGAGCTAGCAAAGGCAAGAGTGGA
AGTGGCTCATGAGGTAAGAATGGCAAGAGAAGCTGAAGCTGCCATGGATCTTCATGTGGCCAAAGCTGGAATGAAGGCTGAGAAAGAAATGGCTAAGTTTTCCGACCCTC
CGTCCGGTTCCTTCGTGCCTCCCGGCGCCACTGCCGCCGCTCCCAATGTGGCTGTGCCTCCGAGCGCGACTATCATCAGAGCCCCTGGCGCCGACGACAAGGCGGAAGCT
CCTCCCTCTAAGCACTTCATGTAA
Protein sequenceShow/hide protein sequence
MQAVRDKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRMAREAEAAMDLHVAKAGMKAEKEMAKFSDPPSGSFVPPGATAAAPNVAVPPSATIIRAPGADDKAEA
PPSKHFM