CuGenDBv2

Gene ID	Sed0022834
Organism	Sechium edule (Chayote v1)
Description	t-SNARE coiled-coil homology domain-containing protein
Genome location	LG13:26157703..26163040
RNA-Seq Expression	Sed0022834
Synteny	Sed0022834
Gene Ontology terms	GO:0015031 - protein transport (biological process) GO:0030173 - integral component of Golgi membrane (cellular component)
InterPro domains	IPR000727 - Target SNARE coiled-coil homology domain IPR039897 - BET1-like protein IPR039899 - BET1, SNARE domain

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004136265.1 bet1-like protein At1g29060 [Cucumis sativus]

2.6e-57

89.71

Show/hide

Query:  MASNSYRGGSSSHRGVSAPYRSREGLSTRTAASSDEIQLQIDPMHGDLDDEIVGLHSQVKRLRNIAQDIGSEAKSQNDFLDQLQMTLIKAQAGVKNNVRR
        MAS+S+RGGSS + G +A +RSREGLSTR AASSDEIQLQIDPM GDLDDEIVGLHSQVKRLRNIAQDIG+EAKSQ DFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASNSYRGGSSSHRGVSAPYRSREGLSTRTAASSDEIQLQIDPMHGDLDDEIVGLHSQVKRLRNIAQDIGSEAKSQNDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKVSRK
        LNKKIIQNGSNHVVQVVVFALICFFIVYMWSK+SRK
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKVSRK

XP_008466185.1 PREDICTED: bet1-like protein At1g29060 [Cucumis melo]

1.5e-57

88.24

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Query:  MASNSYRGGSSSHRGVSAPYRSREGLSTRTAASSDEIQLQIDPMHGDLDDEIVGLHSQVKRLRNIAQDIGSEAKSQNDFLDQLQMTLIKAQAGVKNNVRR
        MAS+S+RGGSS + G +AP+RSREGLSTR AA+SDEIQLQIDPM GDLDDEIVGLHSQVKRLRNIAQDIG+EAKSQ DFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASNSYRGGSSSHRGVSAPYRSREGLSTRTAASSDEIQLQIDPMHGDLDDEIVGLHSQVKRLRNIAQDIGSEAKSQNDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKVSRK
        LNKKIIQNGSNHV+QVVVFALICFFIVYMW+K+SRK
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKVSRK

XP_022940948.1 bet1-like protein At1g29060 [Cucurbita moschata]

1.8e-58

89.71

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Query:  MASNSYRGGSSSHRGVSAPYRSREGLSTRTAASSDEIQLQIDPMHGDLDDEIVGLHSQVKRLRNIAQDIGSEAKSQNDFLDQLQMTLIKAQAGVKNNVRR
        MASNSYRGGSS + G +APYRSREGLSTR AA+SDEIQLQIDPM GDLDD+IVGLH QVKRLRNIAQ+IG+EAKSQ DFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASNSYRGGSSSHRGVSAPYRSREGLSTRTAASSDEIQLQIDPMHGDLDDEIVGLHSQVKRLRNIAQDIGSEAKSQNDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKVSRK
        LNKKIIQNGSNHVVQVVVFALICFFIVYMWSK+SRK
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKVSRK

XP_022976307.1 bet1-like protein At1g29060 [Cucurbita maxima]

5.7e-57

87.5

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Query:  MASNSYRGGSSSHRGVSAPYRSREGLSTRTAASSDEIQLQIDPMHGDLDDEIVGLHSQVKRLRNIAQDIGSEAKSQNDFLDQLQMTLIKAQAGVKNNVRR
        MAS+S+RGGSS + G +APYRSREGLSTRTAA+SDEIQLQIDPM GDLDDEIVGLHSQVKRLRNIA DIG+EAK Q+DFLDQLQMTLIKAQAGVK+NVRR
Subjt:  MASNSYRGGSSSHRGVSAPYRSREGLSTRTAASSDEIQLQIDPMHGDLDDEIVGLHSQVKRLRNIAQDIGSEAKSQNDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKVSRK
        LNKKIIQNGSNHVVQVV+FALICFFIVYMW K+SRK
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKVSRK

XP_022980898.1 bet1-like protein At1g29060 [Cucurbita maxima]

3.9e-58

88.97

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Query:  MASNSYRGGSSSHRGVSAPYRSREGLSTRTAASSDEIQLQIDPMHGDLDDEIVGLHSQVKRLRNIAQDIGSEAKSQNDFLDQLQMTLIKAQAGVKNNVRR
        MASNSYRGGSS + G +APYRSREGLSTR +A+SDEIQLQIDPM GDLDD+IVGLH QVKRLRNIAQ+IG+EAKSQ DFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASNSYRGGSSSHRGVSAPYRSREGLSTRTAASSDEIQLQIDPMHGDLDDEIVGLHSQVKRLRNIAQDIGSEAKSQNDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKVSRK
        LNKKIIQNGSNHVVQVVVFALICFFIVYMWSK+SRK
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKVSRK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LHL4 t-SNARE coiled-coil homology domain-containing protein

1.2e-57

89.71

Show/hide

Query:  MASNSYRGGSSSHRGVSAPYRSREGLSTRTAASSDEIQLQIDPMHGDLDDEIVGLHSQVKRLRNIAQDIGSEAKSQNDFLDQLQMTLIKAQAGVKNNVRR
        MAS+S+RGGSS + G +A +RSREGLSTR AASSDEIQLQIDPM GDLDDEIVGLHSQVKRLRNIAQDIG+EAKSQ DFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASNSYRGGSSSHRGVSAPYRSREGLSTRTAASSDEIQLQIDPMHGDLDDEIVGLHSQVKRLRNIAQDIGSEAKSQNDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKVSRK
        LNKKIIQNGSNHVVQVVVFALICFFIVYMWSK+SRK
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKVSRK

A0A1S3CQM7 bet1-like protein At1g29060

7.3e-58

88.24

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Query:  MASNSYRGGSSSHRGVSAPYRSREGLSTRTAASSDEIQLQIDPMHGDLDDEIVGLHSQVKRLRNIAQDIGSEAKSQNDFLDQLQMTLIKAQAGVKNNVRR
        MAS+S+RGGSS + G +AP+RSREGLSTR AA+SDEIQLQIDPM GDLDDEIVGLHSQVKRLRNIAQDIG+EAKSQ DFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASNSYRGGSSSHRGVSAPYRSREGLSTRTAASSDEIQLQIDPMHGDLDDEIVGLHSQVKRLRNIAQDIGSEAKSQNDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKVSRK
        LNKKIIQNGSNHV+QVVVFALICFFIVYMW+K+SRK
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKVSRK

A0A5A7TAQ3 Bet1-like protein

7.3e-58

88.24

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Query:  MASNSYRGGSSSHRGVSAPYRSREGLSTRTAASSDEIQLQIDPMHGDLDDEIVGLHSQVKRLRNIAQDIGSEAKSQNDFLDQLQMTLIKAQAGVKNNVRR
        MAS+S+RGGSS + G +AP+RSREGLSTR AA+SDEIQLQIDPM GDLDDEIVGLHSQVKRLRNIAQDIG+EAKSQ DFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASNSYRGGSSSHRGVSAPYRSREGLSTRTAASSDEIQLQIDPMHGDLDDEIVGLHSQVKRLRNIAQDIGSEAKSQNDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKVSRK
        LNKKIIQNGSNHV+QVVVFALICFFIVYMW+K+SRK
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKVSRK

A0A6J1FQQ6 bet1-like protein At1g29060

8.6e-59

89.71

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Query:  MASNSYRGGSSSHRGVSAPYRSREGLSTRTAASSDEIQLQIDPMHGDLDDEIVGLHSQVKRLRNIAQDIGSEAKSQNDFLDQLQMTLIKAQAGVKNNVRR
        MASNSYRGGSS + G +APYRSREGLSTR AA+SDEIQLQIDPM GDLDD+IVGLH QVKRLRNIAQ+IG+EAKSQ DFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASNSYRGGSSSHRGVSAPYRSREGLSTRTAASSDEIQLQIDPMHGDLDDEIVGLHSQVKRLRNIAQDIGSEAKSQNDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKVSRK
        LNKKIIQNGSNHVVQVVVFALICFFIVYMWSK+SRK
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKVSRK

A0A6J1J0M1 bet1-like protein At1g29060

1.9e-58

88.97

Show/hide

Query:  MASNSYRGGSSSHRGVSAPYRSREGLSTRTAASSDEIQLQIDPMHGDLDDEIVGLHSQVKRLRNIAQDIGSEAKSQNDFLDQLQMTLIKAQAGVKNNVRR
        MASNSYRGGSS + G +APYRSREGLSTR +A+SDEIQLQIDPM GDLDD+IVGLH QVKRLRNIAQ+IG+EAKSQ DFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASNSYRGGSSSHRGVSAPYRSREGLSTRTAASSDEIQLQIDPMHGDLDDEIVGLHSQVKRLRNIAQDIGSEAKSQNDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKVSRK
        LNKKIIQNGSNHVVQVVVFALICFFIVYMWSK+SRK
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKVSRK

SwissProt top hits

e value

%identity

Alignment

Q8L9S0 Bet1-like protein At1g29060

1.0e-45

68.38

Show/hide

Query:  MASNSYRGGSSSHRGVSAPYRSREGLSTRTAASSDEIQLQIDPMHGDLDDEIVGLHSQVKRLRNIAQDIGSEAKSQNDFLDQLQMTLIKAQAGVKNNVRR
        MASN  RG   S  G + PYRSREGLSTR A+ S+EIQL+IDPMH DLDDEI+GLH QV++L+NIAQ+IGSEAKSQ DFLD+LQMTLI+AQAGVKNN+R+
Subjt:  MASNSYRGGSSSHRGVSAPYRSREGLSTRTAASSDEIQLQIDPMHGDLDDEIVGLHSQVKRLRNIAQDIGSEAKSQNDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKVSRK
        LN  II++G+NH++ VV+FAL+ FFI+YMWSK+ ++
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKVSRK

Q8VXX9 Bet1-like protein At4g14600

1.0e-45

67.15

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Query:  MASNSYRGGS-SSHRGVSAPYRSREGLSTRTAASSDEIQLQIDPMHGDLDDEIVGLHSQVKRLRNIAQDIGSEAKSQNDFLDQLQMTLIKAQAGVKNNVR
        MASN +R G+  S  G +APYRSREGLSTR AA S+EIQL+IDPMH DLDDEI GLH QV++L+NIAQ+IGSEAK Q DFLD+LQMTLI+AQAGVKNN+R
Subjt:  MASNSYRGGS-SSHRGVSAPYRSREGLSTRTAASSDEIQLQIDPMHGDLDDEIVGLHSQVKRLRNIAQDIGSEAKSQNDFLDQLQMTLIKAQAGVKNNVR

Query:  RLNKKIIQNGSNHVVQVVVFALICFFIVYMWSKVSRK
        +LN  II++G+NH++ VV+FAL+ FF++Y+WSK+ ++
Subjt:  RLNKKIIQNGSNHVVQVVVFALICFFIVYMWSKVSRK

Q9UNK0 Syntaxin-8

3.4e-04

26.5

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Query:  RGVSAPYRSREGLSTRTAASSDEIQLQIDPMHGDLDDEIVGLHSQVKRLRNIAQDIGSEAKSQNDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHV
        RG   P+   E   TR     DEI+ Q   +  + D  +  L S + R + + Q+IG+E   QN+ +D L   +      ++N  RR+N    ++ S  +
Subjt:  RGVSAPYRSREGLSTRTAASSDEIQLQIDPMHGDLDDEIVGLHSQVKRLRNIAQDIGSEAKSQNDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHV

Query:  VQVVVFALICFFIVYMW
        + V++  L+   +V +W
Subjt:  VQVVVFALICFFIVYMW

Arabidopsis top hits

e value

%identity

Alignment

AT1G29060.1 Target SNARE coiled-coil domain protein

7.4e-47

68.38

Show/hide

Query:  MASNSYRGGSSSHRGVSAPYRSREGLSTRTAASSDEIQLQIDPMHGDLDDEIVGLHSQVKRLRNIAQDIGSEAKSQNDFLDQLQMTLIKAQAGVKNNVRR
        MASN  RG   S  G + PYRSREGLSTR A+ S+EIQL+IDPMH DLDDEI+GLH QV++L+NIAQ+IGSEAKSQ DFLD+LQMTLI+AQAGVKNN+R+
Subjt:  MASNSYRGGSSSHRGVSAPYRSREGLSTRTAASSDEIQLQIDPMHGDLDDEIVGLHSQVKRLRNIAQDIGSEAKSQNDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKVSRK
        LN  II++G+NH++ VV+FAL+ FFI+YMWSK+ ++
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKVSRK

AT4G14600.1 Target SNARE coiled-coil domain protein

7.4e-47

67.15

Show/hide

Query:  MASNSYRGGS-SSHRGVSAPYRSREGLSTRTAASSDEIQLQIDPMHGDLDDEIVGLHSQVKRLRNIAQDIGSEAKSQNDFLDQLQMTLIKAQAGVKNNVR
        MASN +R G+  S  G +APYRSREGLSTR AA S+EIQL+IDPMH DLDDEI GLH QV++L+NIAQ+IGSEAK Q DFLD+LQMTLI+AQAGVKNN+R
Subjt:  MASNSYRGGS-SSHRGVSAPYRSREGLSTRTAASSDEIQLQIDPMHGDLDDEIVGLHSQVKRLRNIAQDIGSEAKSQNDFLDQLQMTLIKAQAGVKNNVR

Query:  RLNKKIIQNGSNHVVQVVVFALICFFIVYMWSKVSRK
        +LN  II++G+NH++ VV+FAL+ FF++Y+WSK+ ++
Subjt:  RLNKKIIQNGSNHVVQVVVFALICFFIVYMWSKVSRK

Sequences

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CDS sequence

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ATGGCGTCTAATTCGTATCGTGGCGGTAGTTCTTCCCACAGAGGCGTTTCCGCTCCTTATCGATCCAGGGAGGGGCTTAGCACAAGAACGGCGGCTTCTTCCGATGAAAT
TCAGCTTCAGATCGATCCGATGCATGGGGACTTGGACGACGAGATTGTTGGTCTCCATAGCCAAGTTAAGAGGCTGAGAAATATTGCTCAGGATATTGGATCGGAAGCAA
AATCTCAGAATGATTTTCTAGATCAGTTGCAAATGACATTGATCAAAGCTCAAGCTGGGGTGAAGAACAACGTAAGAAGATTGAACAAAAAAATCATACAAAACGGATCA
AATCATGTCGTCCAGGTGGTCGTATTCGCGTTGATCTGTTTCTTTATAGTGTATATGTGGTCAAAAGTATCCAGGAAATGA

mRNA sequence

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GAAGAATCCACTTCATCTTTATTATTTTTCATTTTCTTTGAGTAATTACGAAAATAAATCAATAAACGGCAACGCGTCTCAGAGGTAGACGAGAGTCGGGAAAATCCCAA
TTTGGTTCGAGCTCTCACCTTCCGAATCGATCGAAGATACAGAAACTGGTTCTCGCAATTCGTCCATTTCCGATCCAATTAGGTTTTCACTCTGTCCTTAATGGCGTCTA
ATTCGTATCGTGGCGGTAGTTCTTCCCACAGAGGCGTTTCCGCTCCTTATCGATCCAGGGAGGGGCTTAGCACAAGAACGGCGGCTTCTTCCGATGAAATTCAGCTTCAG
ATCGATCCGATGCATGGGGACTTGGACGACGAGATTGTTGGTCTCCATAGCCAAGTTAAGAGGCTGAGAAATATTGCTCAGGATATTGGATCGGAAGCAAAATCTCAGAA
TGATTTTCTAGATCAGTTGCAAATGACATTGATCAAAGCTCAAGCTGGGGTGAAGAACAACGTAAGAAGATTGAACAAAAAAATCATACAAAACGGATCAAATCATGTCG
TCCAGGTGGTCGTATTCGCGTTGATCTGTTTCTTTATAGTGTATATGTGGTCAAAAGTATCCAGGAAATGAATGTTTCGCTTATTCTGATGAGAGAATAGGAGGAGGAAT
GATATGATGTTTAATGTTATCGCAGTGTCTGTCACGTTCCCTTTGGGTTAGAATATGGGACACTGAAAATAGGCTTTTTATGTCTCTTTTTTAGGAACTTTTGGAGTATA
TACTTTTATACGTTGTAAAGATTTGTATTGTGCATCATAACTTTAGTATTCCTTAATCCACTTCTGCTTAAGGTTTCTATTGTGGCTTTTAGGAGAGAAAAACTCTGCGT
ATTGAGAGGCAACTGAGTATTGTCAAATGATCATTGCAAAGTTGTGACGGTTAATTGTAGAATTAAACTTATATACGTGAAC

Protein sequence

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MASNSYRGGSSSHRGVSAPYRSREGLSTRTAASSDEIQLQIDPMHGDLDDEIVGLHSQVKRLRNIAQDIGSEAKSQNDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGS
NHVVQVVVFALICFFIVYMWSKVSRK

Sed0022834 (gene) of Chayote v1 genome