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Sed0022905 (gene) of Chayote v1 genome

Gene IDSed0022905
OrganismSechium edule (Chayote v1)
DescriptionBEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein .
Genome locationLG05:37551453..37552145
RNA-Seq ExpressionSed0022905
SyntenySed0022905
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036575.1 uncharacterized protein E6C27_scaffold191G00850 [Cucumis melo var. makuwa]3.3e-6563.16Show/hide
Query:  TDSDINLQLCLEPPP---FAAAAPASIGRPNSPNVAT-RTTRSCGTHRSSQRRCNPRT--KTETIPPPYVWSTERRAVVHTLSHLRTNKILMIKGEVRCR
        T+  ++LQL L PP     +  +P +IG   +  +   R TR+ GT RSS RRCN R+   TETI PPY WST RRA+V TL+ LR+++IL I G+VRCR
Subjt:  TDSDINLQLCLEPPP---FAAAAPASIGRPNSPNVAT-RTTRSCGTHRSSQRRCNPRT--KTETIPPPYVWSTERRAVVHTLSHLRTNKILMIKGEVRCR

Query:  RCQRQYEMNYDLVSKFEEIASFVEANKDSFYDRAPSSWMNPNYPTCTFCGLENGVRPVIPSKCRDINWLFLLLGQMLGFLNLSHLKYFCNHTKNHRTGAK
        +CQ +Y + YD+VSKFEEIASFVE NK+ F DRAP SWMNPNYPTC FCG ENG RPVIP + R INWLFLLLG+MLG LNL+HLKYFC++T NHRTGAK
Subjt:  RCQRQYEMNYDLVSKFEEIASFVEANKDSFYDRAPSSWMNPNYPTCTFCGLENGVRPVIPSKCRDINWLFLLLGQMLGFLNLSHLKYFCNHTKNHRTGAK

Query:  NRLLYLTYI
        NRLLYLT I
Subjt:  NRLLYLTYI

XP_008447299.1 PREDICTED: uncharacterized protein LOC103489770 [Cucumis melo]7.8e-7565.02Show/hide
Query:  TDSDINLQLCLEPPP---FAAAAPASIGRPNSPNVAT-RTTRSCGTHRSSQRRCNPRT--KTETIPPPYVWSTERRAVVHTLSHLRTNKILMIKGEVRCR
        T+  ++LQL L PP     +  +P +IG   +  +   R TR+ GT RSS RRCN R+   TETI PPY WST RRA+V TL+ LR+++IL I G+VRCR
Subjt:  TDSDINLQLCLEPPP---FAAAAPASIGRPNSPNVAT-RTTRSCGTHRSSQRRCNPRT--KTETIPPPYVWSTERRAVVHTLSHLRTNKILMIKGEVRCR

Query:  RCQRQYEMNYDLVSKFEEIASFVEANKDSFYDRAPSSWMNPNYPTCTFCGLENGVRPVIPSKCRDINWLFLLLGQMLGFLNLSHLKYFCNHTKNHRTGAK
        +CQ +Y + YD+VSKFEEIASFVE NK+ F DRAP SWMNPNYPTC FCG ENG RPVIP + R INWLFLLLG+MLG LNL+HLKYFC++T NHRTGAK
Subjt:  RCQRQYEMNYDLVSKFEEIASFVEANKDSFYDRAPSSWMNPNYPTCTFCGLENGVRPVIPSKCRDINWLFLLLGQMLGFLNLSHLKYFCNHTKNHRTGAK

Query:  NRLLYLTYITLCHQLDPSGRFRR
        NRLLYLTYITLCHQ+DPSGRF R
Subjt:  NRLLYLTYITLCHQLDPSGRFRR

XP_011659748.1 uncharacterized protein LOC105436256 [Cucumis sativus]3.5e-7564.19Show/hide
Query:  SQSSETDSDINLQLCLEPP-----PFAAAAPASIGRPNSPNVATRTTRSCGTHRSSQRRCNPRT--KTETIPPPYVWSTERRAVVHTLSHLRTNKILMIK
        +Q +E  + ++L+L L PP        +AAP    RPN+     R TRS GT RSS +RCN R+   TETI PPY WST RRA+V TL+ L++N+IL I 
Subjt:  SQSSETDSDINLQLCLEPP-----PFAAAAPASIGRPNSPNVATRTTRSCGTHRSSQRRCNPRT--KTETIPPPYVWSTERRAVVHTLSHLRTNKILMIK

Query:  GEVRCRRCQRQYEMNYDLVSKFEEIASFVEANKDSFYDRAPSSWMNPNYPTCTFCGLENGVRPVIPSKCRDINWLFLLLGQMLGFLNLSHLKYFCNHTKN
        G+V+CR+CQ +Y + YD+ SKFEEIASFVE NK+SF DRAP SWMNPNYPTC FCG ENG RPVIP + R INWLFLLLG+MLG LNL+HLKYFC++T N
Subjt:  GEVRCRRCQRQYEMNYDLVSKFEEIASFVEANKDSFYDRAPSSWMNPNYPTCTFCGLENGVRPVIPSKCRDINWLFLLLGQMLGFLNLSHLKYFCNHTKN

Query:  HRTGAKNRLLYLTYITLCHQLDPSGRFRR
        HRTGAKNRLLYLTYITLCHQ+DPSGRF R
Subjt:  HRTGAKNRLLYLTYITLCHQLDPSGRFRR

XP_022972401.1 uncharacterized protein LOC111470968 [Cucurbita maxima]1.1e-6062.16Show/hide
Query:  RTTRSCGTHRSS--QRRCNPRTKTETIPPPYVWSTERRAVVHTLSHLRTNKILMIKGEVRCRRCQRQYEMNYDLVSKFEEIASFVEANKDSFYDRAPSSW
        RT    G  ++S  +R+CN  T T  I PPY WST+R AVVHTL +L  N+IL I G+V+C++C+R YE+ Y++VSKF EI SFVE N +SF DRAP  W
Subjt:  RTTRSCGTHRSS--QRRCNPRTKTETIPPPYVWSTERRAVVHTLSHLRTNKILMIKGEVRCRRCQRQYEMNYDLVSKFEEIASFVEANKDSFYDRAPSSW

Query:  MNPNYPTCTFCGLENGVRPVIPSKCRDINWLFLLLGQMLGFLNLSHLKYFCNHTKNHRTGAKNRLLYLTYITLCHQLDPSGRFRR
        M PNYPTC FCG E GV+PVIP +   INW+FLLLG+M+G L L+HLKYFC++TKNHRTG+K+RL+YLTYITLC Q+DPSGRF R
Subjt:  MNPNYPTCTFCGLENGVRPVIPSKCRDINWLFLLLGQMLGFLNLSHLKYFCNHTKNHRTGAKNRLLYLTYITLCHQLDPSGRFRR

XP_023511615.1 uncharacterized protein LOC111776409 [Cucurbita pepo subsp. pepo]6.4e-6156.54Show/hide
Query:  DINLQLCLEPPPFAAAAPASIGRPNSPNVATRTTRSCGTHRSS--QRRCNPRTKTETIPPPYVWSTERRAVVHTLSHLRTNKILMIKGEVRCRRCQRQYE
        D+ L L L     AAA+ A+         + RT  + G  ++S  +R+CN  T T  I PPY WST+R AVVHTL +L +N+I+ I GEV+C++C+R YE
Subjt:  DINLQLCLEPPPFAAAAPASIGRPNSPNVATRTTRSCGTHRSS--QRRCNPRTKTETIPPPYVWSTERRAVVHTLSHLRTNKILMIKGEVRCRRCQRQYE

Query:  MNYDLVSKFEEIASFVEANKDSFYDRAPSSWMNPNYPTCTFCGLENGVRPVIPSKCRDINWLFLLLGQMLGFLNLSHLKYFCNHTKNHRTGAKNRLLYLT
        M YD+VSKF EI  FVE   +SF DRAP  WM PNYPTC FCG E GV+PVIP +   INW+FLLLG+M+G L L+HLKYFC++TKNHRTG+K+RL+YLT
Subjt:  MNYDLVSKFEEIASFVEANKDSFYDRAPSSWMNPNYPTCTFCGLENGVRPVIPSKCRDINWLFLLLGQMLGFLNLSHLKYFCNHTKNHRTGAKNRLLYLT

Query:  YITLCHQLDPSGRF
        YITLC Q+ PSGRF
Subjt:  YITLCHQLDPSGRF

TrEMBL top hitse value%identityAlignment
A0A0A0K3Q8 Uncharacterized protein1.7e-7564.19Show/hide
Query:  SQSSETDSDINLQLCLEPP-----PFAAAAPASIGRPNSPNVATRTTRSCGTHRSSQRRCNPRT--KTETIPPPYVWSTERRAVVHTLSHLRTNKILMIK
        +Q +E  + ++L+L L PP        +AAP    RPN+     R TRS GT RSS +RCN R+   TETI PPY WST RRA+V TL+ L++N+IL I 
Subjt:  SQSSETDSDINLQLCLEPP-----PFAAAAPASIGRPNSPNVATRTTRSCGTHRSSQRRCNPRT--KTETIPPPYVWSTERRAVVHTLSHLRTNKILMIK

Query:  GEVRCRRCQRQYEMNYDLVSKFEEIASFVEANKDSFYDRAPSSWMNPNYPTCTFCGLENGVRPVIPSKCRDINWLFLLLGQMLGFLNLSHLKYFCNHTKN
        G+V+CR+CQ +Y + YD+ SKFEEIASFVE NK+SF DRAP SWMNPNYPTC FCG ENG RPVIP + R INWLFLLLG+MLG LNL+HLKYFC++T N
Subjt:  GEVRCRRCQRQYEMNYDLVSKFEEIASFVEANKDSFYDRAPSSWMNPNYPTCTFCGLENGVRPVIPSKCRDINWLFLLLGQMLGFLNLSHLKYFCNHTKN

Query:  HRTGAKNRLLYLTYITLCHQLDPSGRFRR
        HRTGAKNRLLYLTYITLCHQ+DPSGRF R
Subjt:  HRTGAKNRLLYLTYITLCHQLDPSGRFRR

A0A1S3BHR1 uncharacterized protein LOC1034897703.8e-7565.02Show/hide
Query:  TDSDINLQLCLEPPP---FAAAAPASIGRPNSPNVAT-RTTRSCGTHRSSQRRCNPRT--KTETIPPPYVWSTERRAVVHTLSHLRTNKILMIKGEVRCR
        T+  ++LQL L PP     +  +P +IG   +  +   R TR+ GT RSS RRCN R+   TETI PPY WST RRA+V TL+ LR+++IL I G+VRCR
Subjt:  TDSDINLQLCLEPPP---FAAAAPASIGRPNSPNVAT-RTTRSCGTHRSSQRRCNPRT--KTETIPPPYVWSTERRAVVHTLSHLRTNKILMIKGEVRCR

Query:  RCQRQYEMNYDLVSKFEEIASFVEANKDSFYDRAPSSWMNPNYPTCTFCGLENGVRPVIPSKCRDINWLFLLLGQMLGFLNLSHLKYFCNHTKNHRTGAK
        +CQ +Y + YD+VSKFEEIASFVE NK+ F DRAP SWMNPNYPTC FCG ENG RPVIP + R INWLFLLLG+MLG LNL+HLKYFC++T NHRTGAK
Subjt:  RCQRQYEMNYDLVSKFEEIASFVEANKDSFYDRAPSSWMNPNYPTCTFCGLENGVRPVIPSKCRDINWLFLLLGQMLGFLNLSHLKYFCNHTKNHRTGAK

Query:  NRLLYLTYITLCHQLDPSGRFRR
        NRLLYLTYITLCHQ+DPSGRF R
Subjt:  NRLLYLTYITLCHQLDPSGRFRR

A0A5A7T547 Uncharacterized protein1.6e-6563.16Show/hide
Query:  TDSDINLQLCLEPPP---FAAAAPASIGRPNSPNVAT-RTTRSCGTHRSSQRRCNPRT--KTETIPPPYVWSTERRAVVHTLSHLRTNKILMIKGEVRCR
        T+  ++LQL L PP     +  +P +IG   +  +   R TR+ GT RSS RRCN R+   TETI PPY WST RRA+V TL+ LR+++IL I G+VRCR
Subjt:  TDSDINLQLCLEPPP---FAAAAPASIGRPNSPNVAT-RTTRSCGTHRSSQRRCNPRT--KTETIPPPYVWSTERRAVVHTLSHLRTNKILMIKGEVRCR

Query:  RCQRQYEMNYDLVSKFEEIASFVEANKDSFYDRAPSSWMNPNYPTCTFCGLENGVRPVIPSKCRDINWLFLLLGQMLGFLNLSHLKYFCNHTKNHRTGAK
        +CQ +Y + YD+VSKFEEIASFVE NK+ F DRAP SWMNPNYPTC FCG ENG RPVIP + R INWLFLLLG+MLG LNL+HLKYFC++T NHRTGAK
Subjt:  RCQRQYEMNYDLVSKFEEIASFVEANKDSFYDRAPSSWMNPNYPTCTFCGLENGVRPVIPSKCRDINWLFLLLGQMLGFLNLSHLKYFCNHTKNHRTGAK

Query:  NRLLYLTYI
        NRLLYLT I
Subjt:  NRLLYLTYI

A0A6J1GLD4 uncharacterized protein LOC1114553881.5e-6055.2Show/hide
Query:  DINLQLCLEPPPFAAAAPASIGRPNSPNVA--------TRTTRSCGTHRSSQR-RCNPRTKTETIPPPYVWSTERRAVVHTLSHLRTNKILMIKGEVRCR
        D+ L L L     AA + A+     +   A         RT  + G  ++S R R +    T  I PPY WST+R AVVHTL +L +N+IL I GEV+C+
Subjt:  DINLQLCLEPPPFAAAAPASIGRPNSPNVA--------TRTTRSCGTHRSSQR-RCNPRTKTETIPPPYVWSTERRAVVHTLSHLRTNKILMIKGEVRCR

Query:  RCQRQYEMNYDLVSKFEEIASFVEANKDSFYDRAPSSWMNPNYPTCTFCGLENGVRPVIPSKCRDINWLFLLLGQMLGFLNLSHLKYFCNHTKNHRTGAK
        +C+R YE+ YD+VSKF EI SFVE N +SF DRAP  WM PNYPTC FCG E GV+PVIP +   INW+FLLLG+M+G L L+HLKYFC++TKNHRTG+K
Subjt:  RCQRQYEMNYDLVSKFEEIASFVEANKDSFYDRAPSSWMNPNYPTCTFCGLENGVRPVIPSKCRDINWLFLLLGQMLGFLNLSHLKYFCNHTKNHRTGAK

Query:  NRLLYLTYITLCHQLDPSGRF
        +RL+YLTYITLC Q+DPSGRF
Subjt:  NRLLYLTYITLCHQLDPSGRF

A0A6J1I5V9 uncharacterized protein LOC1114709685.3e-6162.16Show/hide
Query:  RTTRSCGTHRSS--QRRCNPRTKTETIPPPYVWSTERRAVVHTLSHLRTNKILMIKGEVRCRRCQRQYEMNYDLVSKFEEIASFVEANKDSFYDRAPSSW
        RT    G  ++S  +R+CN  T T  I PPY WST+R AVVHTL +L  N+IL I G+V+C++C+R YE+ Y++VSKF EI SFVE N +SF DRAP  W
Subjt:  RTTRSCGTHRSS--QRRCNPRTKTETIPPPYVWSTERRAVVHTLSHLRTNKILMIKGEVRCRRCQRQYEMNYDLVSKFEEIASFVEANKDSFYDRAPSSW

Query:  MNPNYPTCTFCGLENGVRPVIPSKCRDINWLFLLLGQMLGFLNLSHLKYFCNHTKNHRTGAKNRLLYLTYITLCHQLDPSGRFRR
        M PNYPTC FCG E GV+PVIP +   INW+FLLLG+M+G L L+HLKYFC++TKNHRTG+K+RL+YLTYITLC Q+DPSGRF R
Subjt:  MNPNYPTCTFCGLENGVRPVIPSKCRDINWLFLLLGQMLGFLNLSHLKYFCNHTKNHRTGAKNRLLYLTYITLCHQLDPSGRFRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49330.1 hydroxyproline-rich glycoprotein family protein1.0e-4345.45Show/hide
Query:  PPFAAAAPASIGRPNSPNVATRTTRSCGTHRSSQRRCNPRTKTETIPPPYVWSTERRAVVHTLSHLRTNKILMIKGEVRCRRCQRQYEMNYDLVSKFEEI
        PP   A P+S   P  P V    T S   +RS   R     K++TI PP+ W+T RR  + +L +L +N+I  I GEV+CR C++ Y+++Y+L  +F E+
Subjt:  PPFAAAAPASIGRPNSPNVATRTTRSCGTHRSSQRRCNPRTKTETIPPPYVWSTERRAVVHTLSHLRTNKILMIKGEVRCRRCQRQYEMNYDLVSKFEEI

Query:  ASFVEANKDSFYDRAPSSWMNPNYPTCTFCGLENGVRPVIPSKCRDINWLFLLLGQMLGFLNLSHLKYFCNHTKNHRTGAKNRLLYLTYITLCHQLDP
          F    K    DRA   W  P    C  CG E  V+PVI  +   INWLFLLLGQ LGF  L  LK FC H+KNHRTGAK+R+LYLTY+ LC  L P
Subjt:  ASFVEANKDSFYDRAPSSWMNPNYPTCTFCGLENGVRPVIPSKCRDINWLFLLLGQMLGFLNLSHLKYFCNHTKNHRTGAKNRLLYLTYITLCHQLDP

AT2G16190.1 BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G49330.1)2.4e-3743.31Show/hide
Query:  IPPPYVWSTERRAVVHTLSHLRTNKILMIKGEVRCRRCQRQYEMNYDLVSKFEEIASFVEANKDSFYDRAPSSWMNPNYPTCTFCGLENGVRPVIPSKCR
        I PPY W+T++   + +   L +N I +I G+V C+ C R   + Y+L  KF E+  +++ NK+    RAP SW  P    C  C  E  ++PV+  +  
Subjt:  IPPPYVWSTERRAVVHTLSHLRTNKILMIKGEVRCRRCQRQYEMNYDLVSKFEEIASFVEANKDSFYDRAPSSWMNPNYPTCTFCGLENGVRPVIPSKCR

Query:  DINWLFLLLGQMLGFLNLSHLKYFCNHTKNHRTGAKNRLLYLTYITLCHQLDPSGRF
        +INWLFLLLGQMLG   L  L+YFC     HRTG+K+R++Y+TY++LC QLDP G F
Subjt:  DINWLFLLLGQMLGFLNLSHLKYFCNHTKNHRTGAKNRLLYLTYITLCHQLDPSGRF

AT2G16190.2 FUNCTIONS IN: molecular_function unknown2.2e-2238.35Show/hide
Query:  IPPPYVWSTERRAVVHTLSHLRTNKILMIKGEVRCRRCQRQYEMNYDLVSKFEEIASFVEANKDSFYDRAPSSWMNPNYPTCTFCGLENGVRPVIPSKCR
        I PPY W+T++   + +   L +N I +I G+V C+ C R   + Y+L  KF E+  +++ NK+    RAP SW  P    C  C  E  ++PV+  +  
Subjt:  IPPPYVWSTERRAVVHTLSHLRTNKILMIKGEVRCRRCQRQYEMNYDLVSKFEEIASFVEANKDSFYDRAPSSWMNPNYPTCTFCGLENGVRPVIPSKCR

Query:  DINWLFLLLGQMLGFLNLSHLKYFCNHTKNHRT
        +INWLFLLLGQMLG   L  L    +  K+H T
Subjt:  DINWLFLLLGQMLGFLNLSHLKYFCNHTKNHRT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACCACTCCACAAGCCAAAGCAGTGAAACTGACAGTGACATCAACCTGCAACTCTGCCTCGAGCCGCCACCCTTCGCTGCCGCTGCCCCCGCCTCTATTGGCCG
GCCAAATTCACCAAACGTAGCAACGAGAACCACTCGCAGTTGCGGAACTCACCGATCATCTCAACGACGGTGCAACCCCCGAACGAAGACGGAAACGATCCCACCGCCAT
ATGTGTGGTCGACTGAGCGGCGAGCGGTGGTACACACCCTTAGCCACCTGAGAACAAATAAAATCCTGATGATCAAGGGGGAAGTGAGGTGCCGGCGGTGCCAGAGACAG
TACGAGATGAATTACGACCTCGTTTCGAAGTTCGAGGAGATTGCGAGCTTTGTCGAGGCAAACAAGGATTCCTTTTACGATCGGGCACCGAGCTCGTGGATGAACCCTAA
TTATCCCACATGCACATTTTGTGGACTTGAGAATGGGGTGAGGCCGGTGATTCCTTCCAAGTGTAGAGACATTAATTGGCTGTTCCTGCTGTTAGGGCAAATGCTAGGGT
TTCTCAACCTCAGCCATCTCAAATACTTCTGCAATCATACCAAAAATCATCGAACGGGTGCTAAGAATCGCCTTCTTTATCTTACTTATATTACTTTGTGTCACCAACTT
GATCCTTCTGGCCGTTTTCGCCGATCCAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAACCACTCCACAAGCCAAAGCAGTGAAACTGACAGTGACATCAACCTGCAACTCTGCCTCGAGCCGCCACCCTTCGCTGCCGCTGCCCCCGCCTCTATTGGCCG
GCCAAATTCACCAAACGTAGCAACGAGAACCACTCGCAGTTGCGGAACTCACCGATCATCTCAACGACGGTGCAACCCCCGAACGAAGACGGAAACGATCCCACCGCCAT
ATGTGTGGTCGACTGAGCGGCGAGCGGTGGTACACACCCTTAGCCACCTGAGAACAAATAAAATCCTGATGATCAAGGGGGAAGTGAGGTGCCGGCGGTGCCAGAGACAG
TACGAGATGAATTACGACCTCGTTTCGAAGTTCGAGGAGATTGCGAGCTTTGTCGAGGCAAACAAGGATTCCTTTTACGATCGGGCACCGAGCTCGTGGATGAACCCTAA
TTATCCCACATGCACATTTTGTGGACTTGAGAATGGGGTGAGGCCGGTGATTCCTTCCAAGTGTAGAGACATTAATTGGCTGTTCCTGCTGTTAGGGCAAATGCTAGGGT
TTCTCAACCTCAGCCATCTCAAATACTTCTGCAATCATACCAAAAATCATCGAACGGGTGCTAAGAATCGCCTTCTTTATCTTACTTATATTACTTTGTGTCACCAACTT
GATCCTTCTGGCCGTTTTCGCCGATCCAACTAG
Protein sequenceShow/hide protein sequence
MENHSTSQSSETDSDINLQLCLEPPPFAAAAPASIGRPNSPNVATRTTRSCGTHRSSQRRCNPRTKTETIPPPYVWSTERRAVVHTLSHLRTNKILMIKGEVRCRRCQRQ
YEMNYDLVSKFEEIASFVEANKDSFYDRAPSSWMNPNYPTCTFCGLENGVRPVIPSKCRDINWLFLLLGQMLGFLNLSHLKYFCNHTKNHRTGAKNRLLYLTYITLCHQL
DPSGRFRRSN