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Sed0022924 (gene) of Chayote v1 genome

Gene IDSed0022924
OrganismSechium edule (Chayote v1)
Descriptioncostars family protein
Genome locationLG07:8770575..8773425
RNA-Seq ExpressionSed0022924
SyntenySed0022924
Gene Ontology termsGO:0032970 - regulation of actin filament-based process (biological process)
InterPro domainsIPR027817 - Costars domain
IPR038095 - Costars domain superfamily
IPR044302 - Costars family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH09226.1 Costars family protein [Prunus dulcis]2.0e-3273.79Show/hide
Query:  MNVDEEVDRLKEEIQRLGKLQDDGSYKTLMRSARKR--------SKVTFGVMFNDDRCANIFEALVGTLRAAKKRKIVAYDGELLLQGVHDNVEIILKAT
        MNV+EEV+R+KEEIQRLGK+QDDGSYK + R+ R +          VTFGV+FNDDRCANIFEALVGTLRAAKKRK + Y+GELLLQGVHDNVEIILK T
Subjt:  MNVDEEVDRLKEEIQRLGKLQDDGSYKTLMRSARKR--------SKVTFGVMFNDDRCANIFEALVGTLRAAKKRKIVAYDGELLLQGVHDNVEIILKAT

Query:  PAA
        PAA
Subjt:  PAA

MBA0875093.1 hypothetical protein [Gossypium schwendimanii]1.7e-3180Show/hide
Query:  MNVDEEVDRLKEEIQRLGKLQDDGSYKTLMRSARKRSKVTFGVMFNDDRCANIFEALVGTLRAAKKRKIVAYDGELLLQGVHDNVEIILKATPAA
        MNVDEEV+RLKEEIQRLG++Q DGSY           KVTFGV+FNDDRCANIFEALVGTLRAAKKRK+VAYDGELLLQGVHDNVEIILKAT  A
Subjt:  MNVDEEVDRLKEEIQRLGKLQDDGSYKTLMRSARKRSKVTFGVMFNDDRCANIFEALVGTLRAAKKRKIVAYDGELLLQGVHDNVEIILKATPAA

XP_017619192.1 PREDICTED: costars family protein [Gossypium arboreum]5.8e-3281.05Show/hide
Query:  MNVDEEVDRLKEEIQRLGKLQDDGSYKTLMRSARKRSKVTFGVMFNDDRCANIFEALVGTLRAAKKRKIVAYDGELLLQGVHDNVEIILKATPAA
        MNVDEEV+RLKEEIQRLG++Q DGSY           KVTFGV+FNDDRCANIFEALVGTLRAAKKRK+VAYDGELLLQGVHDNVEIILKAT AA
Subjt:  MNVDEEVDRLKEEIQRLGKLQDDGSYKTLMRSARKRSKVTFGVMFNDDRCANIFEALVGTLRAAKKRKIVAYDGELLLQGVHDNVEIILKATPAA

XP_022149133.1 costars family protein [Momordica charantia]4.0e-3383.16Show/hide
Query:  MNVDEEVDRLKEEIQRLGKLQDDGSYKTLMRSARKRSKVTFGVMFNDDRCANIFEALVGTLRAAKKRKIVAYDGELLLQGVHDNVEIILKATPAA
        MNVDEEV+RLKEEIQRLGK+QDDGSY           KVTFGV+FNDDRCANIFEALVGTLRAAKKRKIV YDGELLLQGVHDNVEIILKA PAA
Subjt:  MNVDEEVDRLKEEIQRLGKLQDDGSYKTLMRSARKRSKVTFGVMFNDDRCANIFEALVGTLRAAKKRKIVAYDGELLLQGVHDNVEIILKATPAA

XP_022922531.1 costars family protein [Cucurbita moschata]1.8e-3383.16Show/hide
Query:  MNVDEEVDRLKEEIQRLGKLQDDGSYKTLMRSARKRSKVTFGVMFNDDRCANIFEALVGTLRAAKKRKIVAYDGELLLQGVHDNVEIILKATPAA
        MNVDEEV+RLKEEIQRLGK+QDDGSY           KVTFGV+FNDDRCANIFEALVGTLRAAKKRKIV YDGELLLQGVHDNVEI+LKATPAA
Subjt:  MNVDEEVDRLKEEIQRLGKLQDDGSYKTLMRSARKRSKVTFGVMFNDDRCANIFEALVGTLRAAKKRKIVAYDGELLLQGVHDNVEIILKATPAA

TrEMBL top hitse value%identityAlignment
A0A4Y1RZI4 Costars family protein9.6e-3373.79Show/hide
Query:  MNVDEEVDRLKEEIQRLGKLQDDGSYKTLMRSARKR--------SKVTFGVMFNDDRCANIFEALVGTLRAAKKRKIVAYDGELLLQGVHDNVEIILKAT
        MNV+EEV+R+KEEIQRLGK+QDDGSYK + R+ R +          VTFGV+FNDDRCANIFEALVGTLRAAKKRK + Y+GELLLQGVHDNVEIILK T
Subjt:  MNVDEEVDRLKEEIQRLGKLQDDGSYKTLMRSARKR--------SKVTFGVMFNDDRCANIFEALVGTLRAAKKRKIVAYDGELLLQGVHDNVEIILKAT

Query:  PAA
        PAA
Subjt:  PAA

A0A6J1D600 costars family protein1.9e-3383.16Show/hide
Query:  MNVDEEVDRLKEEIQRLGKLQDDGSYKTLMRSARKRSKVTFGVMFNDDRCANIFEALVGTLRAAKKRKIVAYDGELLLQGVHDNVEIILKATPAA
        MNVDEEV+RLKEEIQRLGK+QDDGSY           KVTFGV+FNDDRCANIFEALVGTLRAAKKRKIV YDGELLLQGVHDNVEIILKA PAA
Subjt:  MNVDEEVDRLKEEIQRLGKLQDDGSYKTLMRSARKRSKVTFGVMFNDDRCANIFEALVGTLRAAKKRKIVAYDGELLLQGVHDNVEIILKATPAA

A0A6J1E4D6 costars family protein8.7e-3483.16Show/hide
Query:  MNVDEEVDRLKEEIQRLGKLQDDGSYKTLMRSARKRSKVTFGVMFNDDRCANIFEALVGTLRAAKKRKIVAYDGELLLQGVHDNVEIILKATPAA
        MNVDEEV+RLKEEIQRLGK+QDDGSY           KVTFGV+FNDDRCANIFEALVGTLRAAKKRKIV YDGELLLQGVHDNVEI+LKATPAA
Subjt:  MNVDEEVDRLKEEIQRLGKLQDDGSYKTLMRSARKRSKVTFGVMFNDDRCANIFEALVGTLRAAKKRKIVAYDGELLLQGVHDNVEIILKATPAA

A0A6J1J9Z5 costars family protein8.7e-3483.16Show/hide
Query:  MNVDEEVDRLKEEIQRLGKLQDDGSYKTLMRSARKRSKVTFGVMFNDDRCANIFEALVGTLRAAKKRKIVAYDGELLLQGVHDNVEIILKATPAA
        MNVDEEV+RLKEEIQRLGK+QDDGSY           KVTFGV+FNDDRCANIFEALVGTLRAAKKRKIV YDGELLLQGVHDNVEI+LKATPAA
Subjt:  MNVDEEVDRLKEEIQRLGKLQDDGSYKTLMRSARKRSKVTFGVMFNDDRCANIFEALVGTLRAAKKRKIVAYDGELLLQGVHDNVEIILKATPAA

A0A6P4N6L8 costars family protein2.8e-3281.05Show/hide
Query:  MNVDEEVDRLKEEIQRLGKLQDDGSYKTLMRSARKRSKVTFGVMFNDDRCANIFEALVGTLRAAKKRKIVAYDGELLLQGVHDNVEIILKATPAA
        MNVDEEV+RLKEEIQRLG++Q DGSY           KVTFGV+FNDDRCANIFEALVGTLRAAKKRK+VAYDGELLLQGVHDNVEIILKAT AA
Subjt:  MNVDEEVDRLKEEIQRLGKLQDDGSYKTLMRSARKRSKVTFGVMFNDDRCANIFEALVGTLRAAKKRKIVAYDGELLLQGVHDNVEIILKATPAA

SwissProt top hitse value%identityAlignment
A2XKU9 Costars family protein7.3e-3074.47Show/hide
Query:  MNVDEEVDRLKEEIQRLGKLQDDGSYKTLMRSARKRSKVTFGVMFNDDRCANIFEALVGTLRAAKKRKIVAYDGELLLQGVHDNVEIILKATPA
        MNV+EEV +LKEEIQRLG+ Q DGSY           KVTFGV+FNDDRCANIFEALVGTLRAAKKRKIV YDGELLLQG HDNVEI L   PA
Subjt:  MNVDEEVDRLKEEIQRLGKLQDDGSYKTLMRSARKRSKVTFGVMFNDDRCANIFEALVGTLRAAKKRKIVAYDGELLLQGVHDNVEIILKATPA

A9NK39 Costars family protein WS02710_H032.0e-2768.82Show/hide
Query:  MNVDEEVDRLKEEIQRLGKLQDDGSYKTLMRSARKRSKVTFGVMFNDDRCANIFEALVGTLRAAKKRKIVAYDGELLLQGVHDNVEIILKATP
        +NVDEEV+RLKEEI+RL + + DGSY            V FGV+F+DDRCANIFEALVGTLRAAKKRK+V YDGELLLQGVHDNVEI+L   P
Subjt:  MNVDEEVDRLKEEIQRLGKLQDDGSYKTLMRSARKRSKVTFGVMFNDDRCANIFEALVGTLRAAKKRKIVAYDGELLLQGVHDNVEIILKATP

B4YYA9 Costars family protein ST45-21.1e-2870.97Show/hide
Query:  MNVDEEVDRLKEEIQRLGKLQDDGSYKTLMRSARKRSKVTFGVMFNDDRCANIFEALVGTLRAAKKRKIVAYDGELLLQGVHDNVEIILKATP
        MNV+EE+ +L+EEI RLG LQ DGSY           KVTFGV+FNDDRCANIFEALVGTLRAAKKRKIVA+ GELLLQGVHD VEI L+  P
Subjt:  MNVDEEVDRLKEEIQRLGKLQDDGSYKTLMRSARKRSKVTFGVMFNDDRCANIFEALVGTLRAAKKRKIVAYDGELLLQGVHDNVEIILKATP

Q6AVK1 Costars family protein7.3e-3074.47Show/hide
Query:  MNVDEEVDRLKEEIQRLGKLQDDGSYKTLMRSARKRSKVTFGVMFNDDRCANIFEALVGTLRAAKKRKIVAYDGELLLQGVHDNVEIILKATPA
        MNV+EEV +LKEEIQRLG+ Q DGSY           KVTFGV+FNDDRCANIFEALVGTLRAAKKRKIV YDGELLLQG HDNVEI L   PA
Subjt:  MNVDEEVDRLKEEIQRLGKLQDDGSYKTLMRSARKRSKVTFGVMFNDDRCANIFEALVGTLRAAKKRKIVAYDGELLLQGVHDNVEIILKATPA

Q8LBN7 Costars family protein At4g336402.1e-2972.04Show/hide
Query:  MNVDEEVDRLKEEIQRLGKLQDDGSYKTLMRSARKRSKVTFGVMFNDDRCANIFEALVGTLRAAKKRKIVAYDGELLLQGVHDNVEIILKATP
        MNVDEE+ +L+EEI RLG  Q DGSY           KVTFGV+FNDDRCANIFEALVGTLRAAKKRKIVA++GELLLQGVHD VEI L+ TP
Subjt:  MNVDEEVDRLKEEIQRLGKLQDDGSYKTLMRSARKRSKVTFGVMFNDDRCANIFEALVGTLRAAKKRKIVAYDGELLLQGVHDNVEIILKATP

Arabidopsis top hitse value%identityAlignment
AT4G33640.1 unknown protein1.5e-3072.04Show/hide
Query:  MNVDEEVDRLKEEIQRLGKLQDDGSYKTLMRSARKRSKVTFGVMFNDDRCANIFEALVGTLRAAKKRKIVAYDGELLLQGVHDNVEIILKATP
        MNVDEE+ +L+EEI RLG  Q DGSY           KVTFGV+FNDDRCANIFEALVGTLRAAKKRKIVA++GELLLQGVHD VEI L+ TP
Subjt:  MNVDEEVDRLKEEIQRLGKLQDDGSYKTLMRSARKRSKVTFGVMFNDDRCANIFEALVGTLRAAKKRKIVAYDGELLLQGVHDNVEIILKATP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGTAGATGAGGAAGTTGATCGTCTCAAGGAGGAAATTCAAAGGCTGGGCAAGCTCCAAGATGATGGTTCTTACAAGACCTTAATGAGATCTGCAAGGAAAAGATC
AAAGGTAACTTTCGGGGTTATGTTCAACGACGACCGATGTGCTAACATATTTGAAGCGCTGGTCGGGACGTTGAGAGCAGCAAAGAAGAGAAAAATTGTGGCTTATGATG
GTGAGTTGTTGCTGCAAGGTGTTCATGATAATGTTGAGATCATTCTTAAAGCCACTCCAGCAGCATAA
mRNA sequenceShow/hide mRNA sequence
ACCTAGATCAGCCTTTCAAGGGCCCCTCTTGTATTTCTCCCCTTTCATCTGCTTTTATAAGCCATGAATTGTTAAGAGGATTCGAAAGATCCGAAGCCATGAATGTAGAT
GAGGAAGTTGATCGTCTCAAGGAGGAAATTCAAAGGCTGGGCAAGCTCCAAGATGATGGTTCTTACAAGACCTTAATGAGATCTGCAAGGAAAAGATCAAAGGTAACTTT
CGGGGTTATGTTCAACGACGACCGATGTGCTAACATATTTGAAGCGCTGGTCGGGACGTTGAGAGCAGCAAAGAAGAGAAAAATTGTGGCTTATGATGGTGAGTTGTTGC
TGCAAGGTGTTCATGATAATGTTGAGATCATTCTTAAAGCCACTCCAGCAGCATAAGGTGCAACCACATCAGCTGTGAAGGCTTGACTAGTGATTGATATGTTATATGAT
AAACAGTGTATGCATCTTGAATTTCTATATTCTATAATCAATGTTGGCTGTCTCTTTTCATTTAATAACTTTTTTTTTTCAAATTCACACTCAAGTTCTCTCCTACTTTA
GGTTTAAATTCTAATGCACAAGATCATTGACGAGGTCACCAATCATTTGTTCATTGGTTGAAATTTTCATCGAATTCGAAGTTGTAAGATACAACAGTGCCAAACTAAAG
AAAATCTTCAAAAGTGGC
Protein sequenceShow/hide protein sequence
MNVDEEVDRLKEEIQRLGKLQDDGSYKTLMRSARKRSKVTFGVMFNDDRCANIFEALVGTLRAAKKRKIVAYDGELLLQGVHDNVEIILKATPAA