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Sed0022929 (gene) of Chayote v1 genome

Gene IDSed0022929
OrganismSechium edule (Chayote v1)
DescriptionUPF0057 membrane protein
Genome locationLG12:33039603..33039930
RNA-Seq ExpressionSed0022929
SyntenySed0022929
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR000612 - Proteolipid membrane potential modulator


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146673.1 UPF0057 membrane protein At4g30660 [Cucumis sativus]4.1e-3394.67Show/hide
Query:  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRDEYFDEYRRPLYAPA
        MPSRCEI CEILIAILIPPLGVC RHGCCTVEFCICLLLTFLGYVPGIIYALY IVFIDR+EYFDEYRRPLYAPA
Subjt:  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRDEYFDEYRRPLYAPA

XP_008443846.1 PREDICTED: UPF0057 membrane protein At4g30660 [Cucumis melo]1.1e-3396Show/hide
Query:  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRDEYFDEYRRPLYAPA
        MPSRCEI CEILIAILIPPLGVC RHGCCTVEFCICLLLTFLGYVPGIIYALY IVFIDRDEYFDEYRRPLYAPA
Subjt:  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRDEYFDEYRRPLYAPA

XP_018828305.1 UPF0057 membrane protein At4g30660-like [Juglans regia]2.0e-3289.33Show/hide
Query:  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRDEYFDEYRRPLYAPA
        MPSRCEI CEILIAIL+PPLGVCFRHGCC+VEFCICLLLT LGY+PGIIYALY IVF+DRD+YFDEYRRPLYAPA
Subjt:  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRDEYFDEYRRPLYAPA

XP_022925751.1 UPF0057 membrane protein At4g30660-like [Cucurbita moschata]1.9e-3394.67Show/hide
Query:  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRDEYFDEYRRPLYAPA
        M +RCEI CEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVI+FIDRDEYFDEYRRPLYAPA
Subjt:  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRDEYFDEYRRPLYAPA

XP_038879686.1 UPF0057 membrane protein At4g30660-like [Benincasa hispida]5.4e-3394.67Show/hide
Query:  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRDEYFDEYRRPLYAPA
        MPSRCEI CEILIAILIPPLGVC RHGCCTVEFCICLLLT LGYVPGIIYALY IVFIDRDEYFDEYRRPLYAPA
Subjt:  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRDEYFDEYRRPLYAPA

TrEMBL top hitse value%identityAlignment
A0A0A0LTR2 Uncharacterized protein2.0e-3394.67Show/hide
Query:  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRDEYFDEYRRPLYAPA
        MPSRCEI CEILIAILIPPLGVC RHGCCTVEFCICLLLTFLGYVPGIIYALY IVFIDR+EYFDEYRRPLYAPA
Subjt:  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRDEYFDEYRRPLYAPA

A0A1S3B9R0 UPF0057 membrane protein At4g306605.3e-3496Show/hide
Query:  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRDEYFDEYRRPLYAPA
        MPSRCEI CEILIAILIPPLGVC RHGCCTVEFCICLLLTFLGYVPGIIYALY IVFIDRDEYFDEYRRPLYAPA
Subjt:  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRDEYFDEYRRPLYAPA

A0A2I4F9J0 UPF0057 membrane protein At4g30660-like9.9e-3389.33Show/hide
Query:  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRDEYFDEYRRPLYAPA
        MPSRCEI CEILIAIL+PPLGVCFRHGCC+VEFCICLLLT LGY+PGIIYALY IVF+DRD+YFDEYRRPLYAPA
Subjt:  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRDEYFDEYRRPLYAPA

A0A6J1ED38 UPF0057 membrane protein At4g30660-like9.0e-3494.67Show/hide
Query:  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRDEYFDEYRRPLYAPA
        M +RCEI CEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVI+FIDRDEYFDEYRRPLYAPA
Subjt:  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRDEYFDEYRRPLYAPA

A0A6J1HL57 UPF0057 membrane protein At4g30660-like9.0e-3494.67Show/hide
Query:  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRDEYFDEYRRPLYAPA
        M +RCEI CEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVI+FIDRDEYFDEYRRPLYAPA
Subjt:  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRDEYFDEYRRPLYAPA

SwissProt top hitse value%identityAlignment
O82232 UPF0057 membrane protein At2g240401.0e-2675Show/hide
Query:  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRDEYFDEYRRPLY
        M S CE+ CEI IAIL+PP+GVC RHGCCTVEF ICL+LT LGY+PGIIYA+Y I F+ RDEYFDEYRRP+Y
Subjt:  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRDEYFDEYRRPLY

Q9LRI7 Hydrophobic protein OSR88.7e-1867.19Show/hide
Query:  RCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRDEYFDEY
        RC    EIL+AI++PPLGV  R GCC++EFCICLLLT LGYVPGIIYA+YV+V +D D+Y  EY
Subjt:  RCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRDEYFDEY

Q9M095 UPF0057 membrane protein At4g306503.5e-1973.77Show/hide
Query:  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRD
        M S  E+ CEILIAIL+PPLGVC + GCCTVEF ICL+LT LGY+PGIIYALYVIVF +R+
Subjt:  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRD

Q9SUI0 UPF0057 membrane protein At4g306601.3e-2982.19Show/hide
Query:  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRDEYFDEYRRPLYA
        MPS CEILCEI+IAIL+PPLGVCFR GCCTVEF ICL+LT LGYVPGIIYA+YVIVF  R+EYFDEYRRP+Y+
Subjt:  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRDEYFDEYRRPLYA

Q9ZNQ7 Hydrophobic protein RCI2A1.5e-0969.57Show/hide
Query:  EILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVI
        +I+IAIL+PPLGV  R G C VEF ICL+LT LGY+PGIIYA+YV+
Subjt:  EILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVI

Arabidopsis top hitse value%identityAlignment
AT2G24040.1 Low temperature and salt responsive protein family7.3e-2875Show/hide
Query:  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRDEYFDEYRRPLY
        M S CE+ CEI IAIL+PP+GVC RHGCCTVEF ICL+LT LGY+PGIIYA+Y I F+ RDEYFDEYRRP+Y
Subjt:  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRDEYFDEYRRPLY

AT4G28088.1 Low temperature and salt responsive protein family5.0e-2977.78Show/hide
Query:  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRDEYFDEYRRPLY
        M + CEI CEI+IAILIPPLGVC RHGCCT EF ICL+LT LGYVPGIIYALY IV++DRD++FDEYRRPL+
Subjt:  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRDEYFDEYRRPLY

AT4G30650.1 Low temperature and salt responsive protein family2.5e-2073.77Show/hide
Query:  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRD
        M S  E+ CEILIAIL+PPLGVC + GCCTVEF ICL+LT LGY+PGIIYALYVIVF +R+
Subjt:  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRD

AT4G30660.1 Low temperature and salt responsive protein family9.2e-3182.19Show/hide
Query:  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRDEYFDEYRRPLYA
        MPS CEILCEI+IAIL+PPLGVCFR GCCTVEF ICL+LT LGYVPGIIYA+YVIVF  R+EYFDEYRRP+Y+
Subjt:  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRDEYFDEYRRPLYA

AT4G30660.2 Low temperature and salt responsive protein family9.2e-3182.19Show/hide
Query:  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRDEYFDEYRRPLYA
        MPS CEILCEI+IAIL+PPLGVCFR GCCTVEF ICL+LT LGYVPGIIYA+YVIVF  R+EYFDEYRRP+Y+
Subjt:  MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRDEYFDEYRRPLYA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAAGTCGCTGCGAAATCTTGTGCGAGATTCTCATCGCAATCTTGATCCCTCCATTAGGCGTCTGCTTCAGGCACGGATGTTGCACAGTTGAGTTTTGCATATGCCT
TCTTTTGACGTTTCTCGGTTACGTTCCTGGAATCATCTACGCTTTGTATGTCATCGTTTTCATCGATCGCGATGAGTATTTCGATGAATATCGGCGTCCTCTTTATGCGC
CGGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCAAGTCGCTGCGAAATCTTGTGCGAGATTCTCATCGCAATCTTGATCCCTCCATTAGGCGTCTGCTTCAGGCACGGATGTTGCACAGTTGAGTTTTGCATATGCCT
TCTTTTGACGTTTCTCGGTTACGTTCCTGGAATCATCTACGCTTTGTATGTCATCGTTTTCATCGATCGCGATGAGTATTTCGATGAATATCGGCGTCCTCTTTATGCGC
CGGCCTAG
Protein sequenceShow/hide protein sequence
MPSRCEILCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIVFIDRDEYFDEYRRPLYAPA