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Sed0022932 (gene) of Chayote v1 genome

Gene IDSed0022932
OrganismSechium edule (Chayote v1)
Descriptionsodium/potassium/calcium exchanger 1-like
Genome locationLG05:34334417..34335060
RNA-Seq ExpressionSed0022932
SyntenySed0022932
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589100.1 hypothetical protein SDJN03_17665, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3966.87Show/hide
Query:  MKLVISASLLSAMVFYSSLLPFLHSFNLYISATIHKNYMFLLCNGLLIFIARNSGLIGNPGHEQTGEKGRGAQSQAASMVDGSSKVEVE----EEKEIEL
        MKL+ISASLLSAMVFYSSLLPFLHSFNLYISAT HKNYMFLLCNGLL+FI RNSGLI   G   +G   RGA++  ASM DGSSK+E +    EE+   L
Subjt:  MKLVISASLLSAMVFYSSLLPFLHSFNLYISATIHKNYMFLLCNGLLIFIARNSGLIGNPGHEQTGEKGRGAQSQAASMVDGSSKVEVE----EEKEIEL

Query:  I----ENERSIIEENEERSNLYDDVEEEEFGELSKEELNKKCEEFIRKMKAGIKFESQQGFIL
        I    E+ERSI+E+++      +D +EEE G LSKEELNKKCEEFIRKMKAGIK ESQQ  +L
Subjt:  I----ENERSIIEENEERSNLYDDVEEEEFGELSKEELNKKCEEFIRKMKAGIKFESQQGFIL

KAG7022808.1 hypothetical protein SDJN02_16544, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-3966.87Show/hide
Query:  MKLVISASLLSAMVFYSSLLPFLHSFNLYISATIHKNYMFLLCNGLLIFIARNSGLIGNPGHEQTGEKGRGAQSQAASMVDGSSKVEVE----EEKEIEL
        MKL+ISASLLSAMVFYSSLLPFLHSFNLYISAT HKNYMFLLCNGLL+FI RNSGLI   G   +    RGA++  ASM DGSSK+E +    EE+   L
Subjt:  MKLVISASLLSAMVFYSSLLPFLHSFNLYISATIHKNYMFLLCNGLLIFIARNSGLIGNPGHEQTGEKGRGAQSQAASMVDGSSKVEVE----EEKEIEL

Query:  I----ENERSIIEENEERSNLYDDVEEEEFGELSKEELNKKCEEFIRKMKAGIKFESQQGFIL
        I    E+ERSI+E++       DD +EEE G LSKEELNKKCEEFIRKMKAGIK ESQQ  +L
Subjt:  I----ENERSIIEENEERSNLYDDVEEEEFGELSKEELNKKCEEFIRKMKAGIKFESQQGFIL

XP_022928452.1 uncharacterized protein LOC111435260 [Cucurbita moschata]3.2e-4067.48Show/hide
Query:  MKLVISASLLSAMVFYSSLLPFLHSFNLYISATIHKNYMFLLCNGLLIFIARNSGLIGNPGHEQTGEKGRGAQSQAASMVDGSSKVEVE----EEKEIEL
        MKL+ISASLLSAMVFYSSLLPFLHSFNLYISAT HKNYMFLLCNGLL+FI RNSGLI   G   +G   RGA++  ASM DGSSK+E +    EE+   L
Subjt:  MKLVISASLLSAMVFYSSLLPFLHSFNLYISATIHKNYMFLLCNGLLIFIARNSGLIGNPGHEQTGEKGRGAQSQAASMVDGSSKVEVE----EEKEIEL

Query:  I----ENERSIIEENEERSNLYDDVEEEEFGELSKEELNKKCEEFIRKMKAGIKFESQQGFIL
        I    E+ERSI+E+++      DD +EEE G LSKEELNKKCEEFIRKMKAGIK ESQQ  +L
Subjt:  I----ENERSIIEENEERSNLYDDVEEEEFGELSKEELNKKCEEFIRKMKAGIKFESQQGFIL

XP_023530308.1 uncharacterized protein LOC111792915 [Cucurbita pepo subsp. pepo]1.2e-3966.26Show/hide
Query:  MKLVISASLLSAMVFYSSLLPFLHSFNLYISATIHKNYMFLLCNGLLIFIARNSGLIGNPGHEQTGEKGRGAQSQAASMVDGSSKVEVE----EEKEIEL
        MKL+ISASLLSAMVFYSSLLPFLHSFNLYISAT HKNYMFLLCNGLL+FI RNSGLI   G   +G   RGA++  A+M DGSSK+E +    EE+   L
Subjt:  MKLVISASLLSAMVFYSSLLPFLHSFNLYISATIHKNYMFLLCNGLLIFIARNSGLIGNPGHEQTGEKGRGAQSQAASMVDGSSKVEVE----EEKEIEL

Query:  I----ENERSIIEENEERSNLYDDVEEEEFGELSKEELNKKCEEFIRKMKAGIKFESQQGFIL
        I    E+ERSI+E++       DD ++EE G LSKEELNKKCEEFIRKMKAGIK ESQQ  +L
Subjt:  I----ENERSIIEENEERSNLYDDVEEEEFGELSKEELNKKCEEFIRKMKAGIKFESQQGFIL

XP_038888415.1 histone H3.v1-like [Benincasa hispida]4.2e-4067.88Show/hide
Query:  MKLVISASLLSAMVFYSSLLPFLHSFNLYISATIHKNYMFLLCNGLLIFIARNSGLIGNPGHEQTGEKGRGAQSQAASMVDGS----SKVEVEEEKEIEL
        MKLVISASLLSAMVFYSSLLPFLHS NLYIS TIHKNYMFLLCNGLL+FI RNSGLIGN   EQ+G      ++  A+M DG+    SKVE+EEE+E  L
Subjt:  MKLVISASLLSAMVFYSSLLPFLHSFNLYISATIHKNYMFLLCNGLLIFIARNSGLIGNPGHEQTGEKGRGAQSQAASMVDGS----SKVEVEEEKEIEL

Query:  I----ENERSII--EENEERSNLYDDVEEEEFGELSKEELNKKCEEFIRKMKAGIKFESQQGFIL
        I    ENE  I   E+ EER N Y++ EEEE  E+  EELNKKCEEFIRKMK GIKFESQQ F+L
Subjt:  I----ENERSII--EENEERSNLYDDVEEEEFGELSKEELNKKCEEFIRKMKAGIKFESQQGFIL

TrEMBL top hitse value%identityAlignment
A0A0A0K349 Uncharacterized protein2.1e-3766.26Show/hide
Query:  MKLVISASLLSAMVFYSSLLPFLHSFNLYISATIHKNYMFLLCNGLLIFIARNSGLIGNPGHEQ-TGEKGRGAQSQAASMVDGS----SKVEVEEEKEIE
        MKLVISASLLSAMVFYSSLLPFLHS NLYIS+TIHKNYMFLLCNGLL+FI RNSGLIGN   E+ +G +  G    AA+M DG+    SKVE+EEE+   
Subjt:  MKLVISASLLSAMVFYSSLLPFLHSFNLYISATIHKNYMFLLCNGLLIFIARNSGLIGNPGHEQ-TGEKGRGAQSQAASMVDGS----SKVEVEEEKEIE

Query:  LIENE---RSIIEENEERSNLYDDVEEEEFGELSKEELNKKCEEFIRKMKAGIKFESQQGFIL
        L+ NE    ++I +NE     +   EEEE  E+  EELNKKCEEFIRKMKAGIKFESQQ FIL
Subjt:  LIENE---RSIIEENEERSNLYDDVEEEEFGELSKEELNKKCEEFIRKMKAGIKFESQQGFIL

A0A1S3CG16 gem-associated protein 2-like5.1e-3159.88Show/hide
Query:  MVFYSSLLPFLHSFNLYISATIHKNYMFLLCNGLLIFIARNSGLIGNPGHEQTGEKGRGAQSQAASMVDGSSK------VEVEEEKEIELIENERSI---
        MVFYSSLLPFLHS NLYIS+TIHKNYMFLLCNGLL+FI RNSGLIGN  +EQ+    R     A +M DG+ K      VEVEEE+   L+ NE      
Subjt:  MVFYSSLLPFLHSFNLYISATIHKNYMFLLCNGLLIFIARNSGLIGNPGHEQTGEKGRGAQSQAASMVDGSSK------VEVEEEKEIELIENERSI---

Query:  ---IEENEERSNLYDDVEEEEFGELSK-------EELNKKCEEFIRKMKAGIKFESQQGFIL
            E+ EER   Y++ EEEE  E  +       EELNKKCEEFIRKMKAGIKFESQQ FIL
Subjt:  ---IEENEERSNLYDDVEEEEFGELSK-------EELNKKCEEFIRKMKAGIKFESQQGFIL

A0A6J1C4P4 ATP-dependent RNA helicase MAK52.3e-3162.99Show/hide
Query:  MKLVISASLLSAMVFYSSLLPFLHSFNLYISATIHKNYMFLLCNGLLIFIARNSGLIGNPGHEQTGEKGRGAQSQAASMVDGSSKVEVEEEKEIELI---
        MK++ISASLLSAMV YSSLLPFLHS NLYISATIHKNY+FLLCNGLL+FI RNSGLIG  G EQ    G G + +        SKVE  EE+E  L+   
Subjt:  MKLVISASLLSAMVFYSSLLPFLHSFNLYISATIHKNYMFLLCNGLLIFIARNSGLIGNPGHEQTGEKGRGAQSQAASMVDGSSKVEVEEEKEIELI---

Query:  ENERSIIEENEERSNLYDDVEEEEFGELSKEELNKKCEEFIRKMKAGIKFESQQ
        E    +I E+EE     ++ EEEE G LS EELN+KCEEFIRKMKA IKFE QQ
Subjt:  ENERSIIEENEERSNLYDDVEEEEFGELSKEELNKKCEEFIRKMKAGIKFESQQ

A0A6J1EJY9 uncharacterized protein LOC1114352601.6e-4067.48Show/hide
Query:  MKLVISASLLSAMVFYSSLLPFLHSFNLYISATIHKNYMFLLCNGLLIFIARNSGLIGNPGHEQTGEKGRGAQSQAASMVDGSSKVEVE----EEKEIEL
        MKL+ISASLLSAMVFYSSLLPFLHSFNLYISAT HKNYMFLLCNGLL+FI RNSGLI   G   +G   RGA++  ASM DGSSK+E +    EE+   L
Subjt:  MKLVISASLLSAMVFYSSLLPFLHSFNLYISATIHKNYMFLLCNGLLIFIARNSGLIGNPGHEQTGEKGRGAQSQAASMVDGSSKVEVE----EEKEIEL

Query:  I----ENERSIIEENEERSNLYDDVEEEEFGELSKEELNKKCEEFIRKMKAGIKFESQQGFIL
        I    E+ERSI+E+++      DD +EEE G LSKEELNKKCEEFIRKMKAGIK ESQQ  +L
Subjt:  I----ENERSIIEENEERSNLYDDVEEEEFGELSKEELNKKCEEFIRKMKAGIKFESQQGFIL

A0A6J1I0H9 sodium/potassium/calcium exchanger 1-like1.7e-3462.13Show/hide
Query:  MKLVISASLLSAMVFYSSLLPFLHSFNLYISATIHKNYMFLLCNGLLIFIARNSGLIGNPGHEQTGEKG-RGAQSQAASMVDGSS----KVEVEEEKEIE
        MKLVISAS+LSAMVFYSSLLPFLHS NLYISATIHKNYMFLLCNGLL+FI RNSGLI + G EQ G  G R A++  A+M D ++    KVE  EE+E  
Subjt:  MKLVISASLLSAMVFYSSLLPFLHSFNLYISATIHKNYMFLLCNGLLIFIARNSGLIGNPGHEQTGEKG-RGAQSQAASMVDGSS----KVEVEEEKEIE

Query:  LI-----ENERSIIEENEERSNLYDDVEE----EEFGELSKEELNKKCEEFIRKMKAGIKFESQQGFIL
         I     E+ER + EE +++ +  +  EE    EE G LS EEL+KK EEFIRKMKAGIK ESQQ  IL
Subjt:  LI-----ENERSIIEENEERSNLYDDVEE----EEFGELSKEELNKKCEEFIRKMKAGIKFESQQGFIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G04495.1 unknown protein3.3e-0630.89Show/hide
Query:  KLVISASLLSAMVFYSSLLPF----LHSFNLYISATIHKNYMFLLCNGLLIFIARNSGLIGNPGHEQTGEKGRGAQSQAASMVDGSSKVEVEEEKEIEL-
        K++  AS+ S ++ YSSL+      LH  ++Y S  + K YMFLLCNG++ FI  +            G     +Q +A ++++ + +V +++ KE +L 
Subjt:  KLVISASLLSAMVFYSSLLPF----LHSFNLYISATIHKNYMFLLCNGLLIFIARNSGLIGNPGHEQTGEKGRGAQSQAASMVDGSSKVEVEEEKEIEL-

Query:  ----IENERSIIEENEE-----RSNLYDDVEEEEF-------------------------------GELSKEELNKKCEEFIRKMKAGIKF
            +  E+S+ +E EE     R  L+  +EEEE                                  LS E+LNKKCE+FIRKMKA I+F
Subjt:  ----IENERSIIEENEE-----RSNLYDDVEEEEF-------------------------------GELSKEELNKKCEEFIRKMKAGIKF

AT2G04515.1 unknown protein1.9e-0633.71Show/hide
Query:  KLVISASLLSAMVFYSSLLPF----LHSFNLYISATIHKNYMFLLCNGLLIFIARN-SGLIGNPGH-------EQTGEKGRG--------------AQSQ
        K++  AS+ S ++ YSSL+      LH   +Y S  + K YMFLLCNG++ FI  +  G   +  H       EQT E G                 +S 
Subjt:  KLVISASLLSAMVFYSSLLPF----LHSFNLYISATIHKNYMFLLCNGLLIFIARN-SGLIGNPGH-------EQTGEKGRG--------------AQSQ

Query:  AASMVDGSSKVEVEEEKEIELI--ENERSIIEE-NEERSNLYDDVEEEEFGELSKEELNKKCEEFIRKMKAGIKF
         +   +G   +  EEE+E+ L+  E+E  ++++ +  R + +DD +      LS E+LNKKCE+FIRKMKA I++
Subjt:  AASMVDGSSKVEVEEEKEIELI--ENERSIIEE-NEERSNLYDDVEEEEFGELSKEELNKKCEEFIRKMKAGIKF

AT3G13130.1 unknown protein3.3e-0629.07Show/hide
Query:  HSFNLY------ISATIHKNYMFLLCNGLLIFIARNSGLIGNPGH--------------------------EQTGEKGRGAQSQAASMVDGSSKVEVEEE
        H F LY      ++  + KNYMFLLCNGL++ +A+ SGL+ +                             E   + G G +S  A  V      + +E 
Subjt:  HSFNLY------ISATIHKNYMFLLCNGLLIFIARNSGLIGNPGH--------------------------EQTGEKGRGAQSQAASMVDGSSKVEVEEE

Query:  KEIELIENERSIIEEN--EERSNLY-DDVEEEEFGEL-----SKEELNKKCEEFIRKMKAGIKFESQQGFIL
        ++ E  +++ + + +N  EE   L    + EEE G +     ++EE+NKK +EFIRKMK  ++ E+++  IL
Subjt:  KEIELIENERSIIEEN--EERSNLY-DDVEEEEFGEL-----SKEELNKKCEEFIRKMKAGIKFESQQGFIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTTGTGATCTCAGCTTCTCTGCTATCTGCAATGGTGTTTTACTCTTCACTCCTCCCTTTCCTCCACTCTTTTAATCTTTACATCTCTGCAACAATCCACAAGAA
CTACATGTTCTTGCTCTGCAATGGCCTCCTCATCTTCATCGCTCGAAATTCCGGTCTGATCGGAAACCCGGGCCACGAACAGACCGGCGAAAAGGGCAGGGGAGCTCAAT
CTCAAGCAGCTTCAATGGTGGATGGCAGCAGCAAAGTTGAAGTTGAAGAAGAGAAGGAAATTGAGTTGATTGAAAATGAAAGATCAATTATAGAAGAAAATGAAGAAAGA
TCCAATCTTTATGATGATGTTGAAGAAGAGGAATTTGGGGAATTGAGCAAAGAGGAATTGAATAAGAAATGTGAAGAATTTATTAGAAAAATGAAGGCTGGGATTAAATT
TGAATCACAGCAAGGGTTTATTTTGTAA
mRNA sequenceShow/hide mRNA sequence
CAACCAATCTCCTTCACAAAAAACCCACAACAGCTTCTATTTGAAAAAGAAAAAAAAAAGTTTCAAGCTTTGTGAAAAAATCAACAACCCAATTGACCCAATTGGCCAAA
ATCATCAAATTTCCAATAAAAAATTTAAAATATTTTTGCCAACTTCCACAATGAAGCTTGTGATCTCAGCTTCTCTGCTATCTGCAATGGTGTTTTACTCTTCACTCCTC
CCTTTCCTCCACTCTTTTAATCTTTACATCTCTGCAACAATCCACAAGAACTACATGTTCTTGCTCTGCAATGGCCTCCTCATCTTCATCGCTCGAAATTCCGGTCTGAT
CGGAAACCCGGGCCACGAACAGACCGGCGAAAAGGGCAGGGGAGCTCAATCTCAAGCAGCTTCAATGGTGGATGGCAGCAGCAAAGTTGAAGTTGAAGAAGAGAAGGAAA
TTGAGTTGATTGAAAATGAAAGATCAATTATAGAAGAAAATGAAGAAAGATCCAATCTTTATGATGATGTTGAAGAAGAGGAATTTGGGGAATTGAGCAAAGAGGAATTG
AATAAGAAATGTGAAGAATTTATTAGAAAAATGAAGGCTGGGATTAAATTTGAATCACAGCAAGGGTTTATTTTGTAATTGAAACTTATAATTT
Protein sequenceShow/hide protein sequence
MKLVISASLLSAMVFYSSLLPFLHSFNLYISATIHKNYMFLLCNGLLIFIARNSGLIGNPGHEQTGEKGRGAQSQAASMVDGSSKVEVEEEKEIELIENERSIIEENEER
SNLYDDVEEEEFGELSKEELNKKCEEFIRKMKAGIKFESQQGFIL