; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0022947 (gene) of Chayote v1 genome

Gene IDSed0022947
OrganismSechium edule (Chayote v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationLG14:5630878..5635385
RNA-Seq ExpressionSed0022947
SyntenySed0022947
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEC72938.1 hypothetical protein OsI_06800 [Oryza sativa Indica Group]3.6e-1432.12Show/hide
Query:  RATSENEMDEDVNIEAQFIASIIHEGNKWDTNLIKAIFSKEEADAICGILLGSMDRHDEIIWNANSNRVFSVKSAYHLDMNLSRVGEASTSDNSMSTKLW
        R+ S   +    N   ++++ +I +   WDT+ I   F   +A+AI  I L S    D I W+ +    FSV+SAYHL + L++V E S+S  + +++ W
Subjt:  RATSENEMDEDVNIEAQFIASIIHEGNKWDTNLIKAIFSKEEADAICGILLGSMDRHDEIIWNANSNRVFSVKSAYHLDMNLSRVGEASTSDNSMSTKLW

Query:  NSFWKVEAVPKIKLGAWNILKNMIPTRANIQSKGIDI
        N+ WK  A  K+K+ AW  + N +PT  N + + +++
Subjt:  NSFWKVEAVPKIKLGAWNILKNMIPTRANIQSKGIDI
XP_035544594.1 uncharacterized protein LOC118347987 [Juglans regia]2.1e-1434.19Show/hide
Query:  IASIIHEGNKWDTNLIKAIFSKEEADAICGILLGSMDRHDEIIWNANSNRVFSVKSAYHLDMNLSRVGEASTSDNSMSTKLWNSFWKVEAVPKIKLGAWN
        +  ++    +W+T LI+ IF+KEEAD IC I + SM+  D ++W+ +   +FSV+SAYHL+M   +      S +    K W+S W+++   K+KL  W 
Subjt:  IASIIHEGNKWDTNLIKAIFSKEEADAICGILLGSMDRHDEIIWNANSNRVFSVKSAYHLDMNLSRVGEASTSDNSMSTKLWNSFWKVEAVPKIKLGAWN

Query:  ILKNMIPTRANIQSKGI
           + + T+ N+  K I
Subjt:  ILKNMIPTRANIQSKGI
XP_035544636.1 uncharacterized protein LOC118348020 [Juglans regia]1.5e-1540Show/hide
Query:  IASIIHEGNK-WDTNLIKAIFSKEEADAICGILLGSMDRHDEIIWNANSNRVFSVKSAYHLDMNLSRVGEASTSDNSMSTKLWNSFWKVEAVPKIKLGAW
        +  ++ EG K W+   IK+IFS+EEAD I  I L   D  D +IW  +   +FSVKSAYHL+ + SRV +  +S+ +   KLW S W++      K   W
Subjt:  IASIIHEGNK-WDTNLIKAIFSKEEADAICGILLGSMDRHDEIIWNANSNRVFSVKSAYHLDMNLSRVGEASTSDNSMSTKLWNSFWKVEAVPKIKLGAW

Query:  NILKNMIPTRANIQSKGI--DIRMP
            N++ TR N++SK I  D R P
Subjt:  NILKNMIPTRANIQSKGI--DIRMP
XP_035546588.1 uncharacterized protein LOC118348634 [Juglans regia]3.6e-1434.19Show/hide
Query:  IASIIHEGNKWDTNLIKAIFSKEEADAICGILLGSMDRHDEIIWNANSNRVFSVKSAYHLDMNLSRVGEASTSDNSMSTKLWNSFWKVEAVPKIKLGAWN
        +  ++    +W+T LI+ IF+KEEAD IC I + SM+  D ++W  +   +FSV+SAYHL+M   +      S +    K W+S W+++   K+KL  W 
Subjt:  IASIIHEGNKWDTNLIKAIFSKEEADAICGILLGSMDRHDEIIWNANSNRVFSVKSAYHLDMNLSRVGEASTSDNSMSTKLWNSFWKVEAVPKIKLGAWN

Query:  ILKNMIPTRANIQSKGI
           + + T+ N+  K I
Subjt:  ILKNMIPTRANIQSKGI
XP_035551723.1 uncharacterized protein LOC118349891 [Juglans regia]3.3e-1540.8Show/hide
Query:  IASIIHEGNK-WDTNLIKAIFSKEEADAICGILLGSMDRHDEIIWNANSNRVFSVKSAYHLDMNLSRVGEASTSDNSMSTKLWNSFWKVEAVPKIKLGAW
        +  ++ EG K W+   IK+IFSKEEAD I  I L   D  D +IW  +   +FSVKSAYHL+ + SRV    +S+ +   KLW S W +      K   W
Subjt:  IASIIHEGNK-WDTNLIKAIFSKEEADAICGILLGSMDRHDEIIWNANSNRVFSVKSAYHLDMNLSRVGEASTSDNSMSTKLWNSFWKVEAVPKIKLGAW

Query:  NILKNMIPTRANIQSKGI--DIRMP
            N++ TR N++SK I  D R P
Subjt:  NILKNMIPTRANIQSKGI--DIRMP
TrEMBL top hitse value%identityAlignment
A0A6P9EAZ3 uncharacterized protein LOC1183479871.0e-1434.19Show/hide
Query:  IASIIHEGNKWDTNLIKAIFSKEEADAICGILLGSMDRHDEIIWNANSNRVFSVKSAYHLDMNLSRVGEASTSDNSMSTKLWNSFWKVEAVPKIKLGAWN
        +  ++    +W+T LI+ IF+KEEAD IC I + SM+  D ++W+ +   +FSV+SAYHL+M   +      S +    K W+S W+++   K+KL  W 
Subjt:  IASIIHEGNKWDTNLIKAIFSKEEADAICGILLGSMDRHDEIIWNANSNRVFSVKSAYHLDMNLSRVGEASTSDNSMSTKLWNSFWKVEAVPKIKLGAWN

Query:  ILKNMIPTRANIQSKGI
           + + T+ N+  K I
Subjt:  ILKNMIPTRANIQSKGI
A0A6P9EBC5 uncharacterized protein LOC1183480207.1e-1640Show/hide
Query:  IASIIHEGNK-WDTNLIKAIFSKEEADAICGILLGSMDRHDEIIWNANSNRVFSVKSAYHLDMNLSRVGEASTSDNSMSTKLWNSFWKVEAVPKIKLGAW
        +  ++ EG K W+   IK+IFS+EEAD I  I L   D  D +IW  +   +FSVKSAYHL+ + SRV +  +S+ +   KLW S W++      K   W
Subjt:  IASIIHEGNK-WDTNLIKAIFSKEEADAICGILLGSMDRHDEIIWNANSNRVFSVKSAYHLDMNLSRVGEASTSDNSMSTKLWNSFWKVEAVPKIKLGAW

Query:  NILKNMIPTRANIQSKGI--DIRMP
            N++ TR N++SK I  D R P
Subjt:  NILKNMIPTRANIQSKGI--DIRMP
A0A6P9ERU8 uncharacterized protein LOC1183486341.7e-1434.19Show/hide
Query:  IASIIHEGNKWDTNLIKAIFSKEEADAICGILLGSMDRHDEIIWNANSNRVFSVKSAYHLDMNLSRVGEASTSDNSMSTKLWNSFWKVEAVPKIKLGAWN
        +  ++    +W+T LI+ IF+KEEAD IC I + SM+  D ++W  +   +FSV+SAYHL+M   +      S +    K W+S W+++   K+KL  W 
Subjt:  IASIIHEGNKWDTNLIKAIFSKEEADAICGILLGSMDRHDEIIWNANSNRVFSVKSAYHLDMNLSRVGEASTSDNSMSTKLWNSFWKVEAVPKIKLGAWN

Query:  ILKNMIPTRANIQSKGI
           + + T+ N+  K I
Subjt:  ILKNMIPTRANIQSKGI
A0A6P9F758 uncharacterized protein LOC1183498911.6e-1540.8Show/hide
Query:  IASIIHEGNK-WDTNLIKAIFSKEEADAICGILLGSMDRHDEIIWNANSNRVFSVKSAYHLDMNLSRVGEASTSDNSMSTKLWNSFWKVEAVPKIKLGAW
        +  ++ EG K W+   IK+IFSKEEAD I  I L   D  D +IW  +   +FSVKSAYHL+ + SRV    +S+ +   KLW S W +      K   W
Subjt:  IASIIHEGNK-WDTNLIKAIFSKEEADAICGILLGSMDRHDEIIWNANSNRVFSVKSAYHLDMNLSRVGEASTSDNSMSTKLWNSFWKVEAVPKIKLGAW

Query:  NILKNMIPTRANIQSKGI--DIRMP
            N++ TR N++SK I  D R P
Subjt:  NILKNMIPTRANIQSKGI--DIRMP
B8AFP4 Reverse transcriptase domain-containing protein1.7e-1432.12Show/hide
Query:  RATSENEMDEDVNIEAQFIASIIHEGNKWDTNLIKAIFSKEEADAICGILLGSMDRHDEIIWNANSNRVFSVKSAYHLDMNLSRVGEASTSDNSMSTKLW
        R+ S   +    N   ++++ +I +   WDT+ I   F   +A+AI  I L S    D I W+ +    FSV+SAYHL + L++V E S+S  + +++ W
Subjt:  RATSENEMDEDVNIEAQFIASIIHEGNKWDTNLIKAIFSKEEADAICGILLGSMDRHDEIIWNANSNRVFSVKSAYHLDMNLSRVGEASTSDNSMSTKLW

Query:  NSFWKVEAVPKIKLGAWNILKNMIPTRANIQSKGIDI
        N+ WK  A  K+K+ AW  + N +PT  N + + +++
Subjt:  NSFWKVEAVPKIKLGAWNILKNMIPTRANIQSKGIDI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein1.5e-0524.77Show/hide
Query:  WDTNLIKAIFSKEEADAICGILLGSMDRHDEIIWNANSNRVFSVKSAYHLDMNLSRVGEASTSDNSMSTKLWNSFWKVEAVPKIKLGAWNILKNMIPTRA
        WD + I     + +   I  I L    + D+IIWN N+   ++V+S Y L  +       + +    S  L    W +  +PK+K   W  L   + T  
Subjt:  WDTNLIKAIFSKEEADAICGILLGSMDRHDEIIWNANSNRVFSVKSAYHLDMNLSRVGEASTSDNSMSTKLWNSFWKVEAVPKIKLGAWNILKNMIPTRA

Query:  NIQSKGIDI
         + ++G+ I
Subjt:  NIQSKGIDI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCCAATGAGTGGTTGGGGGAAAAACTCGAGGGATGAATATGAGGGGTGGGGAATCTCAGAGCAGAAAACCTCCAGAGAAAGGGAAGAAGAGGGAGATAATTCAGA
AGCTCGGAGTGTCGATCATCTAGAATGTGTTCATGAGCAGTCGGTGATCTATAAAACAGGAAATGGAGGAGCTCAACAGAATTTAGGTGATCGGAAGGGGAAATCGGTGG
TCGGAGAGGAAGAGGTCGAATCACAACGGTCAACAGCTAGGAAGGCGGCTCAGTCGAGGCTGCAGAATCGTACGATGGGGAGTGATAAGGATCTGAAATCTGACTTTGCT
GCAGGGTTTCGGGATGAAAGGTCAGGGAAAGGAAAGAAGCAGGTGGTGAACTCAGGCCTAGGAGAGAGGTTGGGCTTTGTTGAGTCAGAGGTGTTTCTTGGGCTAGAGGC
GTTGGATCAAATCAAAAAAGAAAAGGAAAGGGGTTTTGGGCTGGTATCTCGGCCTGGACAAGCTGATGAGGTGGAGGAGTATTGGAAAAATTCTGGGATTAAAATTCCAG
CCCCCATTAGTTTGGTTGAAAAAGGAAAAAATCTAGCTGAAGGATTAAGTGAAAATATTACAGGGCTAAAGGGCAATATCAAAGGTGATTTTCAGAACATTATTAAGGTG
GGAAGGCCTAATGATCTGGAGGAAAAGATGGTAGGTAAGGTGGTAAAATGGAAGAGAAGAGCTAGAGGTGAGTCAAAAAGAGCAACATCAGAAAATGAAATGGACGAGGA
TGTAAATATAGAGGCTCAGTTTATTGCCAGTATTATTCATGAAGGAAATAAGTGGGATACAAATTTGATTAAGGCGATTTTCTCGAAAGAAGAGGCGGATGCTATTTGTG
GTATCCTGTTGGGGTCAATGGATAGGCATGATGAAATTATCTGGAATGCAAATTCAAACAGGGTGTTTAGTGTGAAAAGTGCCTACCACTTAGATATGAACTTATCTAGA
GTTGGAGAGGCTTCTACCTCTGATAATTCGATGTCAACAAAGTTGTGGAATTCTTTCTGGAAGGTTGAGGCAGTTCCCAAGATTAAGTTGGGTGCTTGGAATATTCTGAA
AAATATGATCCCGACAAGGGCCAACATTCAGTCGAAGGGAATTGATATTCGAATGCCGACTCGGGGGAATTATTTTGGCAAGGGATTTGTGTTAAGATCCCTATCGAGGA
TCGGCCAAAAGCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCCCAATGAGTGGTTGGGGGAAAAACTCGAGGGATGAATATGAGGGGTGGGGAATCTCAGAGCAGAAAACCTCCAGAGAAAGGGAAGAAGAGGGAGATAATTCAGA
AGCTCGGAGTGTCGATCATCTAGAATGTGTTCATGAGCAGTCGGTGATCTATAAAACAGGAAATGGAGGAGCTCAACAGAATTTAGGTGATCGGAAGGGGAAATCGGTGG
TCGGAGAGGAAGAGGTCGAATCACAACGGTCAACAGCTAGGAAGGCGGCTCAGTCGAGGCTGCAGAATCGTACGATGGGGAGTGATAAGGATCTGAAATCTGACTTTGCT
GCAGGGTTTCGGGATGAAAGGTCAGGGAAAGGAAAGAAGCAGGTGGTGAACTCAGGCCTAGGAGAGAGGTTGGGCTTTGTTGAGTCAGAGGTGTTTCTTGGGCTAGAGGC
GTTGGATCAAATCAAAAAAGAAAAGGAAAGGGGTTTTGGGCTGGTATCTCGGCCTGGACAAGCTGATGAGGTGGAGGAGTATTGGAAAAATTCTGGGATTAAAATTCCAG
CCCCCATTAGTTTGGTTGAAAAAGGAAAAAATCTAGCTGAAGGATTAAGTGAAAATATTACAGGGCTAAAGGGCAATATCAAAGGTGATTTTCAGAACATTATTAAGGTG
GGAAGGCCTAATGATCTGGAGGAAAAGATGGTAGGTAAGGTGGTAAAATGGAAGAGAAGAGCTAGAGGTGAGTCAAAAAGAGCAACATCAGAAAATGAAATGGACGAGGA
TGTAAATATAGAGGCTCAGTTTATTGCCAGTATTATTCATGAAGGAAATAAGTGGGATACAAATTTGATTAAGGCGATTTTCTCGAAAGAAGAGGCGGATGCTATTTGTG
GTATCCTGTTGGGGTCAATGGATAGGCATGATGAAATTATCTGGAATGCAAATTCAAACAGGGTGTTTAGTGTGAAAAGTGCCTACCACTTAGATATGAACTTATCTAGA
GTTGGAGAGGCTTCTACCTCTGATAATTCGATGTCAACAAAGTTGTGGAATTCTTTCTGGAAGGTTGAGGCAGTTCCCAAGATTAAGTTGGGTGCTTGGAATATTCTGAA
AAATATGATCCCGACAAGGGCCAACATTCAGTCGAAGGGAATTGATATTCGAATGCCGACTCGGGGGAATTATTTTGGCAAGGGATTTGTGTTAAGATCCCTATCGAGGA
TCGGCCAAAAGCCTTAA
Protein sequenceShow/hide protein sequence
MGPMSGWGKNSRDEYEGWGISEQKTSREREEEGDNSEARSVDHLECVHEQSVIYKTGNGGAQQNLGDRKGKSVVGEEEVESQRSTARKAAQSRLQNRTMGSDKDLKSDFA
AGFRDERSGKGKKQVVNSGLGERLGFVESEVFLGLEALDQIKKEKERGFGLVSRPGQADEVEEYWKNSGIKIPAPISLVEKGKNLAEGLSENITGLKGNIKGDFQNIIKV
GRPNDLEEKMVGKVVKWKRRARGESKRATSENEMDEDVNIEAQFIASIIHEGNKWDTNLIKAIFSKEEADAICGILLGSMDRHDEIIWNANSNRVFSVKSAYHLDMNLSR
VGEASTSDNSMSTKLWNSFWKVEAVPKIKLGAWNILKNMIPTRANIQSKGIDIRMPTRGNYFGKGFVLRSLSRIGQKP