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Sed0022952 (gene) of Chayote v1 genome

Gene IDSed0022952
OrganismSechium edule (Chayote v1)
DescriptionAuxin responsive SAUR protein
Genome locationLG05:1841281..1841723
RNA-Seq ExpressionSed0022952
SyntenySed0022952
Gene Ontology termsGO:0009733 - response to auxin (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038583.1 Auxin responsive SAUR protein [Cucumis melo var. makuwa]1.6e-4068.15Show/hide
Query:  MNCLILPSYVMKRRRRRA-GPRLAYRRLNKPGLVHEDAAE---SLVMVVVGKEKRKFFVDPFVLEETPFRVLIEKGG---EEEDGEIWREGKRRVVFVDV
        M CL+LP YVMKRRRRR+  P L Y RL+K      D+++   SLV VV GKE+R+F VDPFVLEE PFR LIEKGG   ++EDG+     K+RV+FVDV
Subjt:  MNCLILPSYVMKRRRRRA-GPRLAYRRLNKPGLVHEDAAE---SLVMVVVGKEKRKFFVDPFVLEETPFRVLIEKGG---EEEDGEIWREGKRRVVFVDV

Query:  DAILFEHLLWLMYNDCSSLFKLNVEEILDFYSQDF
        DAILFEHLLWLMYNDCSSLFKLNVEEILDFY+QDF
Subjt:  DAILFEHLLWLMYNDCSSLFKLNVEEILDFYSQDF
XP_008465964.1 PREDICTED: uncharacterized protein LOC103503536 [Cucumis melo]1.6e-4068.15Show/hide
Query:  MNCLILPSYVMKRRRRRA-GPRLAYRRLNKPGLVHEDAAE---SLVMVVVGKEKRKFFVDPFVLEETPFRVLIEKGG---EEEDGEIWREGKRRVVFVDV
        M CL+LP YVMKRRRRR+  P L Y RL+K      D+++   SLV VV GKE+R+F VDPFVLEE PFR LIEKGG   ++EDG+     K+RV+FVDV
Subjt:  MNCLILPSYVMKRRRRRA-GPRLAYRRLNKPGLVHEDAAE---SLVMVVVGKEKRKFFVDPFVLEETPFRVLIEKGG---EEEDGEIWREGKRRVVFVDV

Query:  DAILFEHLLWLMYNDCSSLFKLNVEEILDFYSQDF
        DAILFEHLLWLMYNDCSSLFKLNVEEILDFY+QDF
Subjt:  DAILFEHLLWLMYNDCSSLFKLNVEEILDFYSQDF
XP_011652654.1 auxin-responsive protein SAUR78 [Cucumis sativus]5.4e-4166.67Show/hide
Query:  MNCLILPSYVMKRRRRRAG--PRLAYRRLNKPGL-----VHEDAAESLVMVVVGKEKRKFFVDPFVLEETPFRVLIEKGGEEEDGEIWREGKRRVVFVDV
        M CL+LP YVMKRRRRR    P L Y RLNK        + + A  SLV VV GKE+R+F VDPFVLEE PFR+LIEKGG++++ E     ++RV+FVDV
Subjt:  MNCLILPSYVMKRRRRRAG--PRLAYRRLNKPGL-----VHEDAAESLVMVVVGKEKRKFFVDPFVLEETPFRVLIEKGGEEEDGEIWREGKRRVVFVDV

Query:  DAILFEHLLWLMYNDCSSLFKLNVEEILDFYSQDF
        DAILFEHLLWLMYNDCSSLFKLNVEEILDFY+QDF
Subjt:  DAILFEHLLWLMYNDCSSLFKLNVEEILDFYSQDF
XP_022931160.1 uncharacterized protein LOC111437423 [Cucurbita moschata]9.8e-3564.93Show/hide
Query:  MNCLI--LPSYVMKRRRRRAGPRLAYRRLNKPGLVHEDAAESLVMVVVGKEKRKFFVDPFVLEETPFRVLIEKGGEEEDGEIWREGKRR----VVFVDVD
        M+CL+  LP YVMKRRRRR  PRL YRRLNK        +ESLV VVVGKE+ +F VDPFVLEE PFRVL+EKG  EE     ++GKRR    ++FVDVD
Subjt:  MNCLI--LPSYVMKRRRRRAGPRLAYRRLNKPGLVHEDAAESLVMVVVGKEKRKFFVDPFVLEETPFRVLIEKGGEEEDGEIWREGKRR----VVFVDVD

Query:  AILFEHLLWLMYNDCSSLFKLNVEEILDFYSQDF
        AILFEH LWL+YND SSL  LN++EIL FYSQDF
Subjt:  AILFEHLLWLMYNDCSSLFKLNVEEILDFYSQDF
XP_038888374.1 uncharacterized protein LOC120078224 [Benincasa hispida]1.7e-4271.54Show/hide
Query:  MNCLILPSYVMKRRRRRA-GPRLAYRRLNKPGLVHEDAAE-SLVMVVVGKEKRKFFVDPFVLEETPFRVLIEKGGEEEDGEIWREGKRRVVFVDVDAILF
        M+CL+LP YVMKRRRRR+  PRL Y RLNK  +   D AE SLV VV GKEKR+F VDPFVLEE PFR+LIEKGG++ + E     ++RV+FVDVD+ILF
Subjt:  MNCLILPSYVMKRRRRRA-GPRLAYRRLNKPGLVHEDAAE-SLVMVVVGKEKRKFFVDPFVLEETPFRVLIEKGGEEEDGEIWREGKRRVVFVDVDAILF

Query:  EHLLWLMYNDCSSLFKLNVEEILDFYSQDF
        EHLLWLMYNDCSSLFKLNVEEILDFY+QDF
Subjt:  EHLLWLMYNDCSSLFKLNVEEILDFYSQDF
TrEMBL top hitse value%identityAlignment
A0A0A0LK59 Uncharacterized protein2.6e-4166.67Show/hide
Query:  MNCLILPSYVMKRRRRRAG--PRLAYRRLNKPGL-----VHEDAAESLVMVVVGKEKRKFFVDPFVLEETPFRVLIEKGGEEEDGEIWREGKRRVVFVDV
        M CL+LP YVMKRRRRR    P L Y RLNK        + + A  SLV VV GKE+R+F VDPFVLEE PFR+LIEKGG++++ E     ++RV+FVDV
Subjt:  MNCLILPSYVMKRRRRRAG--PRLAYRRLNKPGL-----VHEDAAESLVMVVVGKEKRKFFVDPFVLEETPFRVLIEKGGEEEDGEIWREGKRRVVFVDV

Query:  DAILFEHLLWLMYNDCSSLFKLNVEEILDFYSQDF
        DAILFEHLLWLMYNDCSSLFKLNVEEILDFY+QDF
Subjt:  DAILFEHLLWLMYNDCSSLFKLNVEEILDFYSQDF
A0A1S3CQ48 uncharacterized protein LOC1035035367.6e-4168.15Show/hide
Query:  MNCLILPSYVMKRRRRRA-GPRLAYRRLNKPGLVHEDAAE---SLVMVVVGKEKRKFFVDPFVLEETPFRVLIEKGG---EEEDGEIWREGKRRVVFVDV
        M CL+LP YVMKRRRRR+  P L Y RL+K      D+++   SLV VV GKE+R+F VDPFVLEE PFR LIEKGG   ++EDG+     K+RV+FVDV
Subjt:  MNCLILPSYVMKRRRRRA-GPRLAYRRLNKPGLVHEDAAE---SLVMVVVGKEKRKFFVDPFVLEETPFRVLIEKGG---EEEDGEIWREGKRRVVFVDV

Query:  DAILFEHLLWLMYNDCSSLFKLNVEEILDFYSQDF
        DAILFEHLLWLMYNDCSSLFKLNVEEILDFY+QDF
Subjt:  DAILFEHLLWLMYNDCSSLFKLNVEEILDFYSQDF
A0A5D3E5S1 Auxin responsive SAUR protein7.6e-4168.15Show/hide
Query:  MNCLILPSYVMKRRRRRA-GPRLAYRRLNKPGLVHEDAAE---SLVMVVVGKEKRKFFVDPFVLEETPFRVLIEKGG---EEEDGEIWREGKRRVVFVDV
        M CL+LP YVMKRRRRR+  P L Y RL+K      D+++   SLV VV GKE+R+F VDPFVLEE PFR LIEKGG   ++EDG+     K+RV+FVDV
Subjt:  MNCLILPSYVMKRRRRRA-GPRLAYRRLNKPGLVHEDAAE---SLVMVVVGKEKRKFFVDPFVLEETPFRVLIEKGG---EEEDGEIWREGKRRVVFVDV

Query:  DAILFEHLLWLMYNDCSSLFKLNVEEILDFYSQDF
        DAILFEHLLWLMYNDCSSLFKLNVEEILDFY+QDF
Subjt:  DAILFEHLLWLMYNDCSSLFKLNVEEILDFYSQDF
A0A6J1EYP5 uncharacterized protein LOC1114374234.8e-3564.93Show/hide
Query:  MNCLI--LPSYVMKRRRRRAGPRLAYRRLNKPGLVHEDAAESLVMVVVGKEKRKFFVDPFVLEETPFRVLIEKGGEEEDGEIWREGKRR----VVFVDVD
        M+CL+  LP YVMKRRRRR  PRL YRRLNK        +ESLV VVVGKE+ +F VDPFVLEE PFRVL+EKG  EE     ++GKRR    ++FVDVD
Subjt:  MNCLI--LPSYVMKRRRRRAGPRLAYRRLNKPGLVHEDAAESLVMVVVGKEKRKFFVDPFVLEETPFRVLIEKGGEEEDGEIWREGKRR----VVFVDVD

Query:  AILFEHLLWLMYNDCSSLFKLNVEEILDFYSQDF
        AILFEH LWL+YND SSL  LN++EIL FYSQDF
Subjt:  AILFEHLLWLMYNDCSSLFKLNVEEILDFYSQDF
A0A6J1K475 uncharacterized protein LOC1114910301.2e-3363.91Show/hide
Query:  MNCLI-LPSYVMKRRRRRAGPRLAYRRLNKPGLVHEDAAESLVMVVVGKEKRKFFVDPFVLEETPFRVLIEKGGEEEDGEIWREGKRR----VVFVDVDA
        M CL+ LP YVMK RRRR  PRL YRRL+K        +ESLV VVVG+E+ +F VDPFVLEE PFRVL+EKG  EE     +EGKRR    ++FVDVDA
Subjt:  MNCLI-LPSYVMKRRRRRAGPRLAYRRLNKPGLVHEDAAESLVMVVVGKEKRKFFVDPFVLEETPFRVLIEKGGEEEDGEIWREGKRR----VVFVDVDA

Query:  ILFEHLLWLMYNDCSSLFKLNVEEILDFYSQDF
        ILFEHLLWL+YND SSL  LN++EIL FYSQ+F
Subjt:  ILFEHLLWLMYNDCSSLFKLNVEEILDFYSQDF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G17345.1 SAUR-like auxin-responsive protein family1.1e-0429.03Show/hide
Query:  ESLVMVVVGKEKRKFFVDPFVLEETPFRVLIEKGGEEEDGEIWREGKRRVVFVDVDAILFEHLLWLMYNDCS------SLFKLNVEEILDFYS
        E L +V VGK +R + +   V+    F+ L+++        I     +  V V  + +LFEHLLW++ N  S         + +VEE+ +FY+
Subjt:  ESLVMVVVGKEKRKFFVDPFVLEETPFRVLIEKGGEEEDGEIWREGKRRVVFVDVDAILFEHLLWLMYNDCS------SLFKLNVEEILDFYS
AT2G35290.1 unknown protein1.2e-2246.88Show/hide
Query:  MNCLILPSYVMKRRRRRAGPRLAYRRLNKPGLVHEDAAESLVMVVVGKEKRKFFVDPFVLEETPFRVLIEKGGEEEDGEIWREGKRRVVFVD-VDAILFE
        M CLI P   ++R       R AYR L       E+  + ++ VVVGKEK++F V+P+VLEE PFRVLI    +     + R G  RVV++D VD+ILFE
Subjt:  MNCLILPSYVMKRRRRRAGPRLAYRRLNKPGLVHEDAAESLVMVVVGKEKRKFFVDPFVLEETPFRVLIEKGGEEEDGEIWREGKRRVVFVD-VDAILFE

Query:  HLLWLMYNDCSSLFKLNVEEILDFYSQD
        HLLWL+ ND S+   L+V EI++FY+QD
Subjt:  HLLWLMYNDCSSLFKLNVEEILDFYSQD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTGCTTGATCCTCCCTTCCTACGTCATGAAGAGACGACGGCGGAGAGCTGGACCGCGCCTCGCCTACCGCCGCCTCAACAAACCAGGGCTTGTCCACGAGGATGC
GGCGGAGAGCCTCGTGATGGTGGTGGTGGGGAAAGAGAAGAGGAAGTTCTTCGTAGACCCTTTCGTGTTGGAGGAAACCCCGTTTCGGGTTTTGATCGAGAAGGGAGGAG
AGGAGGAGGATGGGGAGATTTGGAGGGAGGGAAAAAGGAGGGTGGTTTTTGTTGATGTTGATGCTATTTTGTTTGAGCATTTGCTGTGGTTGATGTACAATGATTGTTCT
TCTTTGTTTAAGCTCAATGTAGAGGAAATTCTTGACTTTTATTCTCAAGATTTTTAG
mRNA sequenceShow/hide mRNA sequence
AAAAAAATCCAAACTTTGATCAATTCCCTCCATGAATTGCTTGATCCTCCCTTCCTACGTCATGAAGAGACGACGGCGGAGAGCTGGACCGCGCCTCGCCTACCGCCGCC
TCAACAAACCAGGGCTTGTCCACGAGGATGCGGCGGAGAGCCTCGTGATGGTGGTGGTGGGGAAAGAGAAGAGGAAGTTCTTCGTAGACCCTTTCGTGTTGGAGGAAACC
CCGTTTCGGGTTTTGATCGAGAAGGGAGGAGAGGAGGAGGATGGGGAGATTTGGAGGGAGGGAAAAAGGAGGGTGGTTTTTGTTGATGTTGATGCTATTTTGTTTGAGCA
TTTGCTGTGGTTGATGTACAATGATTGTTCTTCTTTGTTTAAGCTCAATGTAGAGGAAATTCTTGACTTTTATTCTCAAGATTTTTAGAGGGAGAGATAGAATAATTCAG
AGT
Protein sequenceShow/hide protein sequence
MNCLILPSYVMKRRRRRAGPRLAYRRLNKPGLVHEDAAESLVMVVVGKEKRKFFVDPFVLEETPFRVLIEKGGEEEDGEIWREGKRRVVFVDVDAILFEHLLWLMYNDCS
SLFKLNVEEILDFYSQDF