CuGenDBv2

Gene ID	Sed0023004
Organism	Sechium edule (Chayote v1)
Description	PPIase cyclophilin-type domain-containing protein
Genome location	LG04:31188258..31192231
RNA-Seq Expression	Sed0023004
Synteny	Sed0023004
Gene Ontology terms	GO:0000413 - protein peptidyl-prolyl isomerization (biological process) GO:0006259 - DNA metabolic process (biological process) GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0003677 - DNA binding (molecular function) GO:0003723 - RNA binding (molecular function) GO:0003755 - peptidyl-prolyl cis-trans isomerase activity (molecular function) GO:0033897 - ribonuclease T2 activity (molecular function)
InterPro domains	IPR001568 - Ribonuclease T2-like IPR018188 - Ribonuclease T2, His active site 1 IPR036430 - Ribonuclease T2-like superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004147239.1 uncharacterized protein LOC101206948 [Cucumis sativus]

2.6e-16

47.37

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Query:  QTCNKVPFATDNFTIHGLWPHKGQSPVVKCHDQWSIHLCWLKRQRDALAPNKQGEGPTGSWTSGLIFGRGQGIIALESGSHTLHVKLFPDCAPHS
        Q C  +    D   +   W + G     KC  ++    CWLK+Q+D L P++Q  G T  WTSG+IFGRG+GI+ALE+   TLH+KLFPDCAPHS
Subjt:  QTCNKVPFATDNFTIHGLWPHKGQSPVVKCHDQWSIHLCWLKRQRDALAPNKQGEGPTGSWTSGLIFGRGQGIIALESGSHTLHVKLFPDCAPHS

XP_008448772.1 PREDICTED: uncharacterized protein LOC103490837 [Cucumis melo]

9.0e-17

48.42

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Query:  QTCNKVPFATDNFTIHGLWPHKGQSPVVKCHDQWSIHLCWLKRQRDALAPNKQGEGPTGSWTSGLIFGRGQGIIALESGSHTLHVKLFPDCAPHS
        Q C  +    D   +   W + G     KC  ++    CWLK+Q+D LAP++Q  G T  WTSG+IFGRG+GI+ALE+   TLH+KLFPDCAPHS
Subjt:  QTCNKVPFATDNFTIHGLWPHKGQSPVVKCHDQWSIHLCWLKRQRDALAPNKQGEGPTGSWTSGLIFGRGQGIIALESGSHTLHVKLFPDCAPHS

XP_022936631.1 uncharacterized protein LOC111443170 [Cucurbita moschata]

4.5e-16

70.18

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Query:  CWLKRQRDALAPNKQGEGPTGSWTSGLIFGRGQGIIALESGSHTLHVKLFPDCAPHS
        CWLK+Q+D LAP++Q  G T  WTSGLIFGRG+GI+ALE+   TLH+KLFPDCAPHS
Subjt:  CWLKRQRDALAPNKQGEGPTGSWTSGLIFGRGQGIIALESGSHTLHVKLFPDCAPHS

XP_023005427.1 uncharacterized protein LOC111498415 [Cucurbita maxima]

4.5e-16

70.18

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Query:  CWLKRQRDALAPNKQGEGPTGSWTSGLIFGRGQGIIALESGSHTLHVKLFPDCAPHS
        CWLK+Q+D LAP++Q  G T  WTSGLIFGRG+GI+ALE+   TLH+KLFPDCAPHS
Subjt:  CWLKRQRDALAPNKQGEGPTGSWTSGLIFGRGQGIIALESGSHTLHVKLFPDCAPHS

XP_038903164.1 uncharacterized protein LOC120089831 [Benincasa hispida]

7.6e-16

70.18

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Query:  CWLKRQRDALAPNKQGEGPTGSWTSGLIFGRGQGIIALESGSHTLHVKLFPDCAPHS
        CWLK+Q+D LAP++Q  G T  WTSG+IFGRG+GIIALE+   TLH+KLFPDCAPHS
Subjt:  CWLKRQRDALAPNKQGEGPTGSWTSGLIFGRGQGIIALESGSHTLHVKLFPDCAPHS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L227 PPIase cyclophilin-type domain-containing protein

1.3e-16

47.37

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Query:  QTCNKVPFATDNFTIHGLWPHKGQSPVVKCHDQWSIHLCWLKRQRDALAPNKQGEGPTGSWTSGLIFGRGQGIIALESGSHTLHVKLFPDCAPHS
        Q C  +    D   +   W + G     KC  ++    CWLK+Q+D L P++Q  G T  WTSG+IFGRG+GI+ALE+   TLH+KLFPDCAPHS
Subjt:  QTCNKVPFATDNFTIHGLWPHKGQSPVVKCHDQWSIHLCWLKRQRDALAPNKQGEGPTGSWTSGLIFGRGQGIIALESGSHTLHVKLFPDCAPHS

A0A1S3BLD3 uncharacterized protein LOC103490837

4.3e-17

48.42

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Query:  QTCNKVPFATDNFTIHGLWPHKGQSPVVKCHDQWSIHLCWLKRQRDALAPNKQGEGPTGSWTSGLIFGRGQGIIALESGSHTLHVKLFPDCAPHS
        Q C  +    D   +   W + G     KC  ++    CWLK+Q+D LAP++Q  G T  WTSG+IFGRG+GI+ALE+   TLH+KLFPDCAPHS
Subjt:  QTCNKVPFATDNFTIHGLWPHKGQSPVVKCHDQWSIHLCWLKRQRDALAPNKQGEGPTGSWTSGLIFGRGQGIIALESGSHTLHVKLFPDCAPHS

A0A5D3CJB2 Peptidyl-prolyl cis-trans isomerases isoform 1

4.3e-17

48.42

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Query:  QTCNKVPFATDNFTIHGLWPHKGQSPVVKCHDQWSIHLCWLKRQRDALAPNKQGEGPTGSWTSGLIFGRGQGIIALESGSHTLHVKLFPDCAPHS
        Q C  +    D   +   W + G     KC  ++    CWLK+Q+D LAP++Q  G T  WTSG+IFGRG+GI+ALE+   TLH+KLFPDCAPHS
Subjt:  QTCNKVPFATDNFTIHGLWPHKGQSPVVKCHDQWSIHLCWLKRQRDALAPNKQGEGPTGSWTSGLIFGRGQGIIALESGSHTLHVKLFPDCAPHS

A0A6J1F815 uncharacterized protein LOC111443170

2.2e-16

70.18

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Query:  CWLKRQRDALAPNKQGEGPTGSWTSGLIFGRGQGIIALESGSHTLHVKLFPDCAPHS
        CWLK+Q+D LAP++Q  G T  WTSGLIFGRG+GI+ALE+   TLH+KLFPDCAPHS
Subjt:  CWLKRQRDALAPNKQGEGPTGSWTSGLIFGRGQGIIALESGSHTLHVKLFPDCAPHS

A0A6J1KT38 uncharacterized protein LOC111498415

2.2e-16

70.18

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Query:  CWLKRQRDALAPNKQGEGPTGSWTSGLIFGRGQGIIALESGSHTLHVKLFPDCAPHS
        CWLK+Q+D LAP++Q  G T  WTSGLIFGRG+GI+ALE+   TLH+KLFPDCAPHS
Subjt:  CWLKRQRDALAPNKQGEGPTGSWTSGLIFGRGQGIIALESGSHTLHVKLFPDCAPHS

SwissProt top hits

e value

%identity

Alignment

Q7SID5 Ribonuclease S-F11

3.1e-04

39.13

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Query:  KHLRLALQWPTTLCLVQTCNKVPFATDNFTIHGLWPHKGQSPVVKC
        ++L+L L WP + C    C ++  A +NFTIHGLWP   ++ +  C
Subjt:  KHLRLALQWPTTLCLVQTCNKVPFATDNFTIHGLWPHKGQSPVVKC

Arabidopsis top hits

e value

%identity

Alignment

AT4G17070.1 peptidyl-prolyl cis-trans isomerases

1.6e-16

59.65

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Query:  CWLKRQRDALAPNKQGEGPTGSWTSGLIFGRGQGIIALESGSHTLHVKLFPDCAPHS
        CWLK+Q+D L P++QG G    WTSGLIFG+GQGI+  E+    +HVKL P+CAPHS
Subjt:  CWLKRQRDALAPNKQGEGPTGSWTSGLIFGRGQGIIALESGSHTLHVKLFPDCAPHS

Sequences

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CDS sequence

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ATGGCGATTTCTCAGACGACGGGTTCCGTTCACGTTGGCGATCATCCTCGCCTCCGTTCTATGGCTTCAAGAGCTAACAATGGCAAGTGCCCCAACTCTGTTCGTATGCC
TACGAATTCTTCTACTGGACGCTCTGTTAATGTGCATTTCCGTTCTCCTCCGGTCTACGCCCAGAATGCTCAATCACACAGAACAAACACACTTTCTGCCATCTCACCTG
TTGCCACTTCCCCAAACCCGGAGCGTTTCTACCCACTATTCCAGAAACACAAGTTTATTTGCAGGATAGGGAGTTGTATTGTTCTTCTATTCCTGTTCCTTGCATCCTCT
TACCCACCACCTTATCATCATCGACGACCTTACAAGCACAAACATCTTCGCCTTGCATTACAATGGCCAACCACGCTATGCTTGGTACAAACATGCAACAAAGTACCATT
TGCAACGGATAATTTTACTATCCACGGTCTTTGGCCTCATAAGGGACAAAGTCCAGTAGTAAAATGTCACGATCAGTGGAGTATTCACCTGTGCTGGCTGAAGAGACAGA
GAGATGCATTGGCTCCTAATAAGCAGGGAGAAGGGCCAACAGGTAGTTGGACATCTGGGCTTATCTTTGGTAGAGGACAGGGAATCATTGCGTTGGAGAGCGGATCACAC
ACCCTTCACGTCAAGCTCTTCCCTGATTGTGCTCCCCATTCAGATTGCCAACATTCTCGAGTAGTTGAAATTACGACATTGTCTTTGGTTTTTACTCTTACCGAGCGGAG
GGTAGAGGTAAATCTTGGGATTCGAAAGGAAACCACATTGAAAATACTTCACACTTCCAATTGA

mRNA sequence

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Protein sequence

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MAISQTTGSVHVGDHPRLRSMASRANNGKCPNSVRMPTNSSTGRSVNVHFRSPPVYAQNAQSHRTNTLSAISPVATSPNPERFYPLFQKHKFICRIGSCIVLLFLFLASS
YPPPYHHRRPYKHKHLRLALQWPTTLCLVQTCNKVPFATDNFTIHGLWPHKGQSPVVKCHDQWSIHLCWLKRQRDALAPNKQGEGPTGSWTSGLIFGRGQGIIALESGSH
TLHVKLFPDCAPHSDCQHSRVVEITTLSLVFTLTERRVEVNLGIRKETTLKILHTSN

Sed0023004 (gene) of Chayote v1 genome