; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0023006 (gene) of Chayote v1 genome

Gene IDSed0023006
OrganismSechium edule (Chayote v1)
DescriptionC2H2-type domain-containing protein
Genome locationLG12:6442744..6443322
RNA-Seq ExpressionSed0023006
SyntenySed0023006
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049282.1 transcriptional regulator SUPERMAN-like [Cucumis melo var. makuwa]9.5e-5065.92Show/hide
Query:  DTATNGEEGGANAAMKSRKNKL-RKSGEEDFINSISWPPKSYGCNFCKREFRSAQALGGHMNVHKIDKALLYSPQAHGHFTNHNLNLNPNPNPNHNLSSR
        +T+T G  GGAN ++KS++NK+ R + EEDFIN ISWPP+SY CNFCKREFRSAQALGGHMNVH+ D+ALLYSP A G FTN NLNL  NPNPN N+SS 
Subjt:  DTATNGEEGGANAAMKSRKNKL-RKSGEEDFINSISWPPKSYGCNFCKREFRSAQALGGHMNVHKIDKALLYSPQAHGHFTNHNLNLNPNPNPNHNLSSR

Query:  DDVVFGRPFDRKASDLNPSSSSG--IAKPNVFEGDHWNKGEKV-FGLDIEISSTNINTSTVLIDSKKDIDLELRLGYST
        D+V F     RKASDL  SS +    AKPN+FE  HW KGEK   GLDIEIS+T  +++ VL DSK DIDLELRLGYST
Subjt:  DDVVFGRPFDRKASDLNPSSSSG--IAKPNVFEGDHWNKGEKV-FGLDIEISSTNINTSTVLIDSKKDIDLELRLGYST

KAE8650336.1 hypothetical protein Csa_011537 [Cucumis sativus]1.4e-5365.28Show/hide
Query:  MEKNCVRMVYHRSLTTRDTATNGEEGGANAAMKSRKNKL-RKSGEEDFINSISWPPKSYGCNFCKREFRSAQALGGHMNVHKIDKALLYSPQAHGHFTNH
        MEKNC+R VY  SLTT +T+T G  GGAN ++KS++NK+ R + EEDFIN ISWPP+SY CNFCKREFRSAQALGGHMNVH+ D+ALLYSP A G FTN 
Subjt:  MEKNCVRMVYHRSLTTRDTATNGEEGGANAAMKSRKNKL-RKSGEEDFINSISWPPKSYGCNFCKREFRSAQALGGHMNVHKIDKALLYSPQAHGHFTNH

Query:  NLNLNPNPNPNHNLSSRDDVVFGRPFDRKASDLNPSSSSG--IAKPNVFEGDHWNKGEKV-FGLDIEISSTNINTSTVLIDSKKDIDLELRLG
        NLNL  NPNP  N+SS D+V F     RKASDL  SS +     KPN+FE  HW KGEK   GLDIEIS+T  +++ VL DSKKDIDLELRLG
Subjt:  NLNLNPNPNPNHNLSSRDDVVFGRPFDRKASDLNPSSSSG--IAKPNVFEGDHWNKGEKV-FGLDIEISSTNINTSTVLIDSKKDIDLELRLG

XP_004134421.1 transcriptional regulator SUPERMAN [Cucumis sativus]1.5e-5565.82Show/hide
Query:  MEKNCVRMVYHRSLTTRDTATNGEEGGANAAMKSRKNKL-RKSGEEDFINSISWPPKSYGCNFCKREFRSAQALGGHMNVHKIDKALLYSPQAHGHFTNH
        MEKNC+R VY  SLTT +T+T G  GGAN ++KS++NK+ R + EEDFIN ISWPP+SY CNFCKREFRSAQALGGHMNVH+ D+ALLYSP A G FTN 
Subjt:  MEKNCVRMVYHRSLTTRDTATNGEEGGANAAMKSRKNKL-RKSGEEDFINSISWPPKSYGCNFCKREFRSAQALGGHMNVHKIDKALLYSPQAHGHFTNH

Query:  NLNLNPNPNPNHNLSSRDDVVFGRPFDRKASDLNPSSSSG--IAKPNVFEGDHWNKGEKV-FGLDIEISSTNINTSTVLIDSKKDIDLELRLGYST
        NLNL  NPNP  N+SS D+V F     RKASDL  SS +     KPN+FE  HW KGEK   GLDIEIS+T  +++ VL DSKKDIDLELRLGYST
Subjt:  NLNLNPNPNPNHNLSSRDDVVFGRPFDRKASDLNPSSSSG--IAKPNVFEGDHWNKGEKV-FGLDIEISSTNINTSTVLIDSKKDIDLELRLGYST

XP_008438560.1 PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis melo]1.4e-5665.82Show/hide
Query:  MEKNCVRMVYHRSLTTRDTATNGEEGGANAAMKSRKNKL-RKSGEEDFINSISWPPKSYGCNFCKREFRSAQALGGHMNVHKIDKALLYSPQAHGHFTNH
        MEKNC+R VY  SLT+ +T+T G  GGAN ++KS++NK+ R + EEDFIN ISWPP+SY CNFCKREFRSAQALGGHMNVH+ D+ALLYSP A G FTN 
Subjt:  MEKNCVRMVYHRSLTTRDTATNGEEGGANAAMKSRKNKL-RKSGEEDFINSISWPPKSYGCNFCKREFRSAQALGGHMNVHKIDKALLYSPQAHGHFTNH

Query:  NLNLNPNPNPNHNLSSRDDVVFGRPFDRKASDLNPSSSSG--IAKPNVFEGDHWNKGEKV-FGLDIEISSTNINTSTVLIDSKKDIDLELRLGYST
        NLNL  NPNPN N+SS D+V F     RKASDL  SS +    AKPN+FE  HW KGEK   GLDIEIS+T  +++ VL DSK DIDLELRLGYST
Subjt:  NLNLNPNPNPNHNLSSRDDVVFGRPFDRKASDLNPSSSSG--IAKPNVFEGDHWNKGEKV-FGLDIEISSTNINTSTVLIDSKKDIDLELRLGYST

XP_038877188.1 transcriptional regulator SUPERMAN-like [Benincasa hispida]1.2e-5765.46Show/hide
Query:  MEKNCVRMVYHRSLTTRDTATNGEEGGANAAMKSRKNKLRKSGEEDFINSISWPPKSYGCNFCKREFRSAQALGGHMNVHKIDKALLYSPQAHGHFTNHN
        ME+NC+R VY  SLTT +T   G    ANAA+KS++NKL ++ EEDFIN ISWPP+SY CNFCKREFRSAQALGGHMNVH+ D+ALLYSP A G FTN N
Subjt:  MEKNCVRMVYHRSLTTRDTATNGEEGGANAAMKSRKNKLRKSGEEDFINSISWPPKSYGCNFCKREFRSAQALGGHMNVHKIDKALLYSPQAHGHFTNHN

Query:  LNLNPNPNPNHNLSSRDDVVFGRPFDRKASDL-NPSSSSGIAKPNVFEGDHWNKGEKV-FGLDIEISSTNINTSTVLIDSKKDIDLELRLGYST
        LNL+ NPNP  N+ S DDV F     +KASDL +PS++  IAK N+FE  HW KGEK   GLDIEIS+T+ N   VL DS KDIDLELRLGYST
Subjt:  LNLNPNPNPNHNLSSRDDVVFGRPFDRKASDL-NPSSSSGIAKPNVFEGDHWNKGEKV-FGLDIEISSTNINTSTVLIDSKKDIDLELRLGYST

TrEMBL top hitse value%identityAlignment
A0A0A0L9Y8 C2H2-type domain-containing protein7.3e-5665.82Show/hide
Query:  MEKNCVRMVYHRSLTTRDTATNGEEGGANAAMKSRKNKL-RKSGEEDFINSISWPPKSYGCNFCKREFRSAQALGGHMNVHKIDKALLYSPQAHGHFTNH
        MEKNC+R VY  SLTT +T+T G  GGAN ++KS++NK+ R + EEDFIN ISWPP+SY CNFCKREFRSAQALGGHMNVH+ D+ALLYSP A G FTN 
Subjt:  MEKNCVRMVYHRSLTTRDTATNGEEGGANAAMKSRKNKL-RKSGEEDFINSISWPPKSYGCNFCKREFRSAQALGGHMNVHKIDKALLYSPQAHGHFTNH

Query:  NLNLNPNPNPNHNLSSRDDVVFGRPFDRKASDLNPSSSSG--IAKPNVFEGDHWNKGEKV-FGLDIEISSTNINTSTVLIDSKKDIDLELRLGYST
        NLNL  NPNP  N+SS D+V F     RKASDL  SS +     KPN+FE  HW KGEK   GLDIEIS+T  +++ VL DSKKDIDLELRLGYST
Subjt:  NLNLNPNPNPNHNLSSRDDVVFGRPFDRKASDLNPSSSSG--IAKPNVFEGDHWNKGEKV-FGLDIEISSTNINTSTVLIDSKKDIDLELRLGYST

A0A1S3AWP0 transcriptional regulator SUPERMAN-like6.6e-5765.82Show/hide
Query:  MEKNCVRMVYHRSLTTRDTATNGEEGGANAAMKSRKNKL-RKSGEEDFINSISWPPKSYGCNFCKREFRSAQALGGHMNVHKIDKALLYSPQAHGHFTNH
        MEKNC+R VY  SLT+ +T+T G  GGAN ++KS++NK+ R + EEDFIN ISWPP+SY CNFCKREFRSAQALGGHMNVH+ D+ALLYSP A G FTN 
Subjt:  MEKNCVRMVYHRSLTTRDTATNGEEGGANAAMKSRKNKL-RKSGEEDFINSISWPPKSYGCNFCKREFRSAQALGGHMNVHKIDKALLYSPQAHGHFTNH

Query:  NLNLNPNPNPNHNLSSRDDVVFGRPFDRKASDLNPSSSSG--IAKPNVFEGDHWNKGEKV-FGLDIEISSTNINTSTVLIDSKKDIDLELRLGYST
        NLNL  NPNPN N+SS D+V F     RKASDL  SS +    AKPN+FE  HW KGEK   GLDIEIS+T  +++ VL DSK DIDLELRLGYST
Subjt:  NLNLNPNPNPNHNLSSRDDVVFGRPFDRKASDLNPSSSSG--IAKPNVFEGDHWNKGEKV-FGLDIEISSTNINTSTVLIDSKKDIDLELRLGYST

A0A5A7U0H2 Transcriptional regulator SUPERMAN-like4.6e-5065.92Show/hide
Query:  DTATNGEEGGANAAMKSRKNKL-RKSGEEDFINSISWPPKSYGCNFCKREFRSAQALGGHMNVHKIDKALLYSPQAHGHFTNHNLNLNPNPNPNHNLSSR
        +T+T G  GGAN ++KS++NK+ R + EEDFIN ISWPP+SY CNFCKREFRSAQALGGHMNVH+ D+ALLYSP A G FTN NLNL  NPNPN N+SS 
Subjt:  DTATNGEEGGANAAMKSRKNKL-RKSGEEDFINSISWPPKSYGCNFCKREFRSAQALGGHMNVHKIDKALLYSPQAHGHFTNHNLNLNPNPNPNHNLSSR

Query:  DDVVFGRPFDRKASDLNPSSSSG--IAKPNVFEGDHWNKGEKV-FGLDIEISSTNINTSTVLIDSKKDIDLELRLGYST
        D+V F     RKASDL  SS +    AKPN+FE  HW KGEK   GLDIEIS+T  +++ VL DSK DIDLELRLGYST
Subjt:  DDVVFGRPFDRKASDLNPSSSSG--IAKPNVFEGDHWNKGEKV-FGLDIEISSTNINTSTVLIDSKKDIDLELRLGYST

A0A6J1E9R8 zinc finger protein 11-like6.7e-4155.07Show/hide
Query:  MEKNCVRMVYHRSLTTRDT----------ATNGEEGGANAAMKSRKNKLRK---SGEEDFINSISWPPKSYGCNFCKREFRSAQALGGHMNVHKIDKALL
        ME+NC+R     SLTT +T          A  G  GG N A KS++NK+ +   + EEDFIN ISWPP+SY CNFCKREFRSAQALGGHMNVH+ D+ALL
Subjt:  MEKNCVRMVYHRSLTTRDT----------ATNGEEGGANAAMKSRKNKLRK---SGEEDFINSISWPPKSYGCNFCKREFRSAQALGGHMNVHKIDKALL

Query:  YSPQA-HGHFTNHNLNLNPNPNPNHNLSSRDDVVFGRPFDRKASDLNPSSSSGIAKPNVFEGDHWNKGEKVFGLDIEISSTNINTSTVLIDS-KKDIDLE
        YSP A H HFTN NLNL+ NP PN            RPF  KA +        IAKPN       NK  K  GLDIEI++TN NT+T++ +S KKDIDLE
Subjt:  YSPQA-HGHFTNHNLNLNPNPNPNHNLSSRDDVVFGRPFDRKASDLNPSSSSGIAKPNVFEGDHWNKGEKVFGLDIEISSTNINTSTVLIDS-KKDIDLE

Query:  LRLGYST
        LRLGYST
Subjt:  LRLGYST

A0A6J1IX36 transcriptional regulator SUPERMAN-like2.3e-4152.63Show/hide
Query:  MEKNCVRMVYHRSLTTRDTATNGEE--------------GGANAAMKSRKNKLRK---SGEEDFINSISWPPKSYGCNFCKREFRSAQALGGHMNVHKID
        ME+NC+R     SL T +T  +G                G ANAA+KS++NK  +   + EEDFIN ISWPP+SY CNFCKREFRSAQALGGHMNVH+ D
Subjt:  MEKNCVRMVYHRSLTTRDTATNGEE--------------GGANAAMKSRKNKLRK---SGEEDFINSISWPPKSYGCNFCKREFRSAQALGGHMNVHKID

Query:  KALLYSPQA-HGHFTNHNLNLNPNPNPNHNLSSRDDVVFGRPFDRKASDLNPSSSSGIAKPNVFEGDHWNKGEKVFGLDIEISSTNINTSTVLIDSKKDI
        +ALLYSP A H HFTN NLNLN NP PN  L + +                      IAKPN       NK  K  GLDIEIS+T  NT+T+L +SKKDI
Subjt:  KALLYSPQA-HGHFTNHNLNLNPNPNPNHNLSSRDDVVFGRPFDRKASDLNPSSSSGIAKPNVFEGDHWNKGEKVFGLDIEISSTNINTSTVLIDSKKDI

Query:  DLELRLGYS
        DLELRLGYS
Subjt:  DLELRLGYS

SwissProt top hitse value%identityAlignment
O80942 Zinc finger protein 101.2e-1065.91Show/hide
Query:  EEDFINSISWPPKSYGCNFCKREFRSAQALGGHMNVHKIDKALL
        E+D   S+ WPP+SY C+FC+REF+SAQALGGHMNVH+ D+A L
Subjt:  EEDFINSISWPPKSYGCNFCKREFRSAQALGGHMNVHKIDKALL

Q38895 Transcriptional regulator SUPERMAN1.9e-1351.39Show/hide
Query:  EEDFINSISWPPKSYGCNFCKREFRSAQALGGHMNVHKIDKALLYSPQAHGHFTNHNLNLNPNPNPNHNLSS
        + D++   SWPP+SY C+FCKREFRSAQALGGHMNVH+ D+A L   Q+    ++ +    P PNPN++ S+
Subjt:  EEDFINSISWPPKSYGCNFCKREFRSAQALGGHMNVHKIDKALLYSPQAHGHFTNHNLNLNPNPNPNHNLSS

Q39265 Zinc finger protein 62.8e-0436.47Show/hide
Query:  KSYGCNFCKREFRSAQALGGHMNVHKIDKALLYSPQ--AHGHFTNHNLNLNPNPNPNHNLSSRDDVVFGRPFDRKASDLNPSSSS
        + Y C +C REF ++QALGGH N HK ++ LL   Q  A      H+ N +P+ NP  +  +    +  +P       L+PSSSS
Subjt:  KSYGCNFCKREFRSAQALGGHMNVHKIDKALLYSPQ--AHGHFTNHNLNLNPNPNPNHNLSSRDDVVFGRPFDRKASDLNPSSSS

Q9LHS9 Probable transcriptional regulator RABBIT EARS7.7e-1074.29Show/hide
Query:  WPPKSYGCNFCKREFRSAQALGGHMNVHKIDKALL
        WPP+SY C+FC REF+SAQALGGHMNVH+ D+A L
Subjt:  WPPKSYGCNFCKREFRSAQALGGHMNVHKIDKALL

Q9SLB8 Zinc finger protein 114.1e-1142.86Show/hide
Query:  SLTTRDTA--TNGEEGGANAAMKSRKNKLRKSGEEDFINSISWPPKSYGCNFCKREFRSAQALGGHMNVHKIDKALLYSPQAHGHFTNHNLNLNPNPNPN
        S + RD      GE+G  +  +     K  ++G       I WPPK+Y C+FC+REFRSAQALGGHMNVH+ D+A L    +   F  H+     NPNPN
Subjt:  SLTTRDTA--TNGEEGGANAAMKSRKNKLRKSGEEDFINSISWPPKSYGCNFCKREFRSAQALGGHMNVHKIDKALLYSPQAHGHFTNHNLNLNPNPNPN

Query:  HNLSS
         + SS
Subjt:  HNLSS

Arabidopsis top hitse value%identityAlignment
AT2G37740.1 zinc-finger protein 108.4e-1265.91Show/hide
Query:  EEDFINSISWPPKSYGCNFCKREFRSAQALGGHMNVHKIDKALL
        E+D   S+ WPP+SY C+FC+REF+SAQALGGHMNVH+ D+A L
Subjt:  EEDFINSISWPPKSYGCNFCKREFRSAQALGGHMNVHKIDKALL

AT2G42410.1 zinc finger protein 112.9e-1242.86Show/hide
Query:  SLTTRDTA--TNGEEGGANAAMKSRKNKLRKSGEEDFINSISWPPKSYGCNFCKREFRSAQALGGHMNVHKIDKALLYSPQAHGHFTNHNLNLNPNPNPN
        S + RD      GE+G  +  +     K  ++G       I WPPK+Y C+FC+REFRSAQALGGHMNVH+ D+A L    +   F  H+     NPNPN
Subjt:  SLTTRDTA--TNGEEGGANAAMKSRKNKLRKSGEEDFINSISWPPKSYGCNFCKREFRSAQALGGHMNVHKIDKALLYSPQAHGHFTNHNLNLNPNPNPN

Query:  HNLSS
         + SS
Subjt:  HNLSS

AT3G23130.1 C2H2 and C2HC zinc fingers superfamily protein1.4e-1451.39Show/hide
Query:  EEDFINSISWPPKSYGCNFCKREFRSAQALGGHMNVHKIDKALLYSPQAHGHFTNHNLNLNPNPNPNHNLSS
        + D++   SWPP+SY C+FCKREFRSAQALGGHMNVH+ D+A L   Q+    ++ +    P PNPN++ S+
Subjt:  EEDFINSISWPPKSYGCNFCKREFRSAQALGGHMNVHKIDKALLYSPQAHGHFTNHNLNLNPNPNPNHNLSS

AT4G17810.1 C2H2 and C2HC zinc fingers superfamily protein1.3e-1262.5Show/hide
Query:  KSGEEDFINSIS---WPPKSYGCNFCKREFRSAQALGGHMNVHKIDKALLYSPQAH
        K+ E+D   +IS   WPP+SY CNFC+REFRSAQALGGHMNVH+ D+A   S +AH
Subjt:  KSGEEDFINSIS---WPPKSYGCNFCKREFRSAQALGGHMNVHKIDKALLYSPQAH

AT5G06070.1 C2H2 and C2HC zinc fingers superfamily protein5.4e-1174.29Show/hide
Query:  WPPKSYGCNFCKREFRSAQALGGHMNVHKIDKALL
        WPP+SY C+FC REF+SAQALGGHMNVH+ D+A L
Subjt:  WPPKSYGCNFCKREFRSAQALGGHMNVHKIDKALL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGAACTGTGTACGCATGGTGTATCATAGGAGTTTAACAACACGAGACACGGCGACGAACGGTGAAGAAGGAGGAGCCAATGCCGCCATGAAAAGCCGGAAAAA
CAAGCTACGGAAGTCGGGGGAGGAGGATTTCATAAATTCGATTTCATGGCCTCCAAAAAGTTACGGGTGCAATTTCTGCAAAAGGGAATTTAGATCTGCCCAAGCTCTTG
GTGGCCATATGAATGTTCATAAGATAGATAAAGCCTTGCTTTACTCTCCTCAAGCTCATGGTCATTTCACAAATCACAACCTTAATCTCAACCCTAACCCTAACCCTAAC
CATAATCTCTCTTCTCGGGACGACGTTGTATTCGGTCGCCCGTTTGACCGAAAAGCTTCAGATTTGAATCCGTCGTCGTCGTCGGGGATTGCGAAACCTAATGTGTTTGA
GGGAGATCATTGGAACAAGGGTGAGAAAGTATTTGGATTAGACATTGAAATCAGTAGTACTAATATTAATACTTCTACTGTTCTTATTGATTCCAAGAAAGACATTGATT
TGGAGCTTAGATTAGGGTACTCAACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGAACTGTGTACGCATGGTGTATCATAGGAGTTTAACAACACGAGACACGGCGACGAACGGTGAAGAAGGAGGAGCCAATGCCGCCATGAAAAGCCGGAAAAA
CAAGCTACGGAAGTCGGGGGAGGAGGATTTCATAAATTCGATTTCATGGCCTCCAAAAAGTTACGGGTGCAATTTCTGCAAAAGGGAATTTAGATCTGCCCAAGCTCTTG
GTGGCCATATGAATGTTCATAAGATAGATAAAGCCTTGCTTTACTCTCCTCAAGCTCATGGTCATTTCACAAATCACAACCTTAATCTCAACCCTAACCCTAACCCTAAC
CATAATCTCTCTTCTCGGGACGACGTTGTATTCGGTCGCCCGTTTGACCGAAAAGCTTCAGATTTGAATCCGTCGTCGTCGTCGGGGATTGCGAAACCTAATGTGTTTGA
GGGAGATCATTGGAACAAGGGTGAGAAAGTATTTGGATTAGACATTGAAATCAGTAGTACTAATATTAATACTTCTACTGTTCTTATTGATTCCAAGAAAGACATTGATT
TGGAGCTTAGATTAGGGTACTCAACTTAG
Protein sequenceShow/hide protein sequence
MEKNCVRMVYHRSLTTRDTATNGEEGGANAAMKSRKNKLRKSGEEDFINSISWPPKSYGCNFCKREFRSAQALGGHMNVHKIDKALLYSPQAHGHFTNHNLNLNPNPNPN
HNLSSRDDVVFGRPFDRKASDLNPSSSSGIAKPNVFEGDHWNKGEKVFGLDIEISSTNINTSTVLIDSKKDIDLELRLGYST