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Sed0023008 (gene) of Chayote v1 genome

Gene IDSed0023008
OrganismSechium edule (Chayote v1)
DescriptionGibberellin-regulated family protein
Genome locationLG04:35040789..35043255
RNA-Seq ExpressionSed0023008
SyntenySed0023008
Gene Ontology termsGO:0009740 - gibberellic acid mediated signaling pathway (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAC20716.1 putative gibberellin-regulated protein [Arabidopsis thaliana]3.7e-3361.76Show/hide
Query:  IHKYIKIYFLSKYIFLSGKNINESGAVAAYHPNGGEGSIRIEDCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGGFK
        I+++ +I F    +++ G  +       A H NGGEGS++ E+CPKAC+ RCS TSHRKPCLFFCNKCC KCLCVPSGTYG +EECPCYNNW TK+GG K
Subjt:  IHKYIKIYFLSKYIFLSGKNINESGAVAAYHPNGGEGSIRIEDCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGGFK

Query:  CP
        CP
Subjt:  CP

KAG7568859.1 Gibberellin regulated protein [Arabidopsis thaliana x Arabidopsis arenosa]1.6e-3165.91Show/hide
Query:  FLSGKNINESGAVAAYHPNGGEGSIRIEDCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGGFKCP
        F +G+ +  +    A H  GGEGS+R E+CPKAC+ RCS TSH+KPCLF+CNKCC KCLCVPSGTYG +EECPCY+NW+TK+GG KCP
Subjt:  FLSGKNINESGAVAAYHPNGGEGSIRIEDCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGGFKCP

KAG7642638.1 Gibberellin regulated protein [Arabidopsis suecica]1.4e-3261.54Show/hide
Query:  KYIKIYFLSKYIFL----SGKNINESGAVAAYHPNGGEGSIRIEDCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGG
        K I ++ +S  +F     +G+ +       A H NGGEGS++ E+CPKAC+ RCS TSHRKPCLFFCNKCC KCLCVPSGTYG +EECPCYNNW TK+GG
Subjt:  KYIKIYFLSKYIFL----SGKNINESGAVAAYHPNGGEGSIRIEDCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGG

Query:  FKCP
         KCP
Subjt:  FKCP

NP_180639.2 Gibberellin-regulated family protein [Arabidopsis thaliana]2.4e-3261.54Show/hide
Query:  KYIKIYFLSKYIFL----SGKNINESGAVAAYHPNGGEGSIRIEDCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGG
        K I ++ +S  +F     +G  +       A H NGGEGS++ E+CPKAC+ RCS TSHRKPCLFFCNKCC KCLCVPSGTYG +EECPCYNNW TK+GG
Subjt:  KYIKIYFLSKYIFL----SGKNINESGAVAAYHPNGGEGSIRIEDCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGG

Query:  FKCP
         KCP
Subjt:  FKCP

XP_002881134.1 gibberellin-regulated protein 12 [Arabidopsis lyrata subsp. lyrata]9.1e-3267.05Show/hide
Query:  FLSGKNINESGAVAAYHPNGGEGSIRIEDCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGGFKCP
        F +G+ +  S    A H  GGEGS+R E+CPKAC+ RCS TSH+KPCLF+CNKCC KCLCVPSGTYG +EECPCY+NW+TK+GG KCP
Subjt:  FLSGKNINESGAVAAYHPNGGEGSIRIEDCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGGFKCP

TrEMBL top hitse value%identityAlignment
A0A540LLF0 Uncharacterized protein1.6e-2975.68Show/hide
Query:  AYHPNGGEGSIRIEDCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGGFKCP
        A  P G +GS+R EDCP+AC  RCSTTSH+KPC+FFC KCC KCLCVPSGTYG +EECPCYNNWKTK+GG KCP
Subjt:  AYHPNGGEGSIRIEDCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGGFKCP

A0A654EZ26 Uncharacterized protein6.8e-3361.54Show/hide
Query:  KYIKIYFLSKYIFL----SGKNINESGAVAAYHPNGGEGSIRIEDCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGG
        K I ++ +S  +F     +G+ +       A H NGGEGS++ E+CPKAC+ RCS TSHRKPCLFFCNKCC KCLCVPSGTYG +EECPCYNNW TK+GG
Subjt:  KYIKIYFLSKYIFL----SGKNINESGAVAAYHPNGGEGSIRIEDCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGG

Query:  FKCP
         KCP
Subjt:  FKCP

A0A6P6GCN5 gibberellin-regulated protein 12-like3.7e-3159.63Show/hide
Query:  LFRNVSFIHKYIKIYFLSKYIFLSGKNINESGAVAAYHPNGGEGSIRIEDCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWK
        +F  V  +  +  I+ L+    + G +I    + A Y+P GGEGS+R +DC KAC+ RCS TSH+KPCLFFCNKCC KCLCVPSGTYG +EECPCYNNWK
Subjt:  LFRNVSFIHKYIKIYFLSKYIFLSGKNINESGAVAAYHPNGGEGSIRIEDCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWK

Query:  TKQGGFKCP
        TK+GG KCP
Subjt:  TKQGGFKCP

D7LC91 Gibberellin-regulated family protein4.4e-3267.05Show/hide
Query:  FLSGKNINESGAVAAYHPNGGEGSIRIEDCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGGFKCP
        F +G+ +  S    A H  GGEGS+R E+CPKAC+ RCS TSH+KPCLF+CNKCC KCLCVPSGTYG +EECPCY+NW+TK+GG KCP
Subjt:  FLSGKNINESGAVAAYHPNGGEGSIRIEDCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGGFKCP

R0FZP7 Uncharacterized protein3.7e-3181.94Show/hide
Query:  HPNGGEGSIRIEDCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGGFKCP
        H  GGEGS+RIE+CPKAC  RCS TSH+KPCLFFCNKCCRKCLCVPSGTYG +EECPCYNNW TK+GG KCP
Subjt:  HPNGGEGSIRIEDCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGGFKCP

SwissProt top hitse value%identityAlignment
A8MR46 Gibberellin-regulated protein 138.1e-2370Show/hide
Query:  DCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGGFKCP
        +C   C  RCS T ++KPCLFFCNKCC KCLCVP GTYG ++ CPCYNNWKTK GG KCP
Subjt:  DCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGGFKCP

P27057 Protein GAST18.6e-2565.67Show/hide
Query:  EGSIRIEDCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGGFKCP
        EG +  +DC   C  RCS TS++KPC+FFC KCC KCLCVP+GTYG ++ CPCYNNWKTK+GG KCP
Subjt:  EGSIRIEDCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGGFKCP

Q6GKX7 Gibberellin-regulated protein 123.2e-3561.54Show/hide
Query:  KYIKIYFLSKYIFL----SGKNINESGAVAAYHPNGGEGSIRIEDCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGG
        K I ++ +S  +F     +G  +       A H NGGEGS++ E+CPKAC+ RCS TSHRKPCLFFCNKCC KCLCVPSGTYG +EECPCYNNW TK+GG
Subjt:  KYIKIYFLSKYIFL----SGKNINESGAVAAYHPNGGEGSIRIEDCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGG

Query:  FKCP
         KCP
Subjt:  FKCP

Q6NMQ7 Gibberellin-regulated protein 61.1e-2461.84Show/hide
Query:  AAYHPNG-GEGSIRIEDCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGGFKCP
        A YHP   G GS++   C   C  RCS T + KPC+FFC KCC KCLCVP GTYG ++ CPCYNNWKT+QGG KCP
Subjt:  AAYHPNG-GEGSIRIEDCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGGFKCP

Q84J95 Gibberellin-regulated protein 57.3e-2448.96Show/hide
Query:  IYFLSKYIFLSGKNINESGAVAAYHPNGGEGSIRIEDCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGGFKCP
        ++FL+    LS  N+ ++          G G ++ + C   C  RCS TSH+KPC+FFC KCC+KCLCVP GT+G ++ CPCYNNWKTK+G  KCP
Subjt:  IYFLSKYIFLSGKNINESGAVAAYHPNGGEGSIRIEDCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGGFKCP

Arabidopsis top hitse value%identityAlignment
AT1G74670.1 Gibberellin-regulated family protein8.0e-2661.84Show/hide
Query:  AAYHPNG-GEGSIRIEDCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGGFKCP
        A YHP   G GS++   C   C  RCS T + KPC+FFC KCC KCLCVP GTYG ++ CPCYNNWKT+QGG KCP
Subjt:  AAYHPNG-GEGSIRIEDCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGGFKCP

AT2G30810.1 Gibberellin-regulated family protein2.2e-3661.54Show/hide
Query:  KYIKIYFLSKYIFL----SGKNINESGAVAAYHPNGGEGSIRIEDCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGG
        K I ++ +S  +F     +G  +       A H NGGEGS++ E+CPKAC+ RCS TSHRKPCLFFCNKCC KCLCVPSGTYG +EECPCYNNW TK+GG
Subjt:  KYIKIYFLSKYIFL----SGKNINESGAVAAYHPNGGEGSIRIEDCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGG

Query:  FKCP
         KCP
Subjt:  FKCP

AT3G02885.1 GAST1 protein homolog 55.2e-2548.96Show/hide
Query:  IYFLSKYIFLSGKNINESGAVAAYHPNGGEGSIRIEDCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGGFKCP
        ++FL+    LS  N+ ++          G G ++ + C   C  RCS TSH+KPC+FFC KCC+KCLCVP GT+G ++ CPCYNNWKTK+G  KCP
Subjt:  IYFLSKYIFLSGKNINESGAVAAYHPNGGEGSIRIEDCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGGFKCP

AT3G10185.1 Gibberellin-regulated family protein5.7e-2470Show/hide
Query:  DCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGGFKCP
        +C   C  RCS T ++KPCLFFCNKCC KCLCVP GTYG ++ CPCYNNWKTK GG KCP
Subjt:  DCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGGFKCP

AT5G15230.2 GAST1 protein homolog 42.8e-2360.29Show/hide
Query:  GEGSIRIEDCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGGFKCP
        G GS++   CP  CD RC  T + K C+ FCNKCCRKCLCVP G YG ++ C CYNNWKT++GG KCP
Subjt:  GEGSIRIEDCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQGGFKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTATTTTGATCTTTTTATTTAGAAATGTGTCTTTTATTCATAAATATATTAAAATATATTTTCTATCAAAATATATTTTTTTATCTGGAAAAAATATCAATGAGAG
TGGTGCAGTTGCAGCCTATCACCCGAATGGTGGAGAGGGATCCATACGAATAGAAGATTGTCCAAAAGCATGCGATTGTCGATGCTCAACGACGTCGCATCGGAAGCCGT
GTTTGTTTTTCTGCAACAAATGCTGCCGAAAGTGTCTGTGCGTTCCATCCGGTACATACGGCCGCAGAGAAGAATGCCCCTGTTACAACAATTGGAAGACCAAGCAAGGC
GGCTTTAAATGCCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTATTTTGATCTTTTTATTTAGAAATGTGTCTTTTATTCATAAATATATTAAAATATATTTTCTATCAAAATATATTTTTTTATCTGGAAAAAATATCAATGAGAG
TGGTGCAGTTGCAGCCTATCACCCGAATGGTGGAGAGGGATCCATACGAATAGAAGATTGTCCAAAAGCATGCGATTGTCGATGCTCAACGACGTCGCATCGGAAGCCGT
GTTTGTTTTTCTGCAACAAATGCTGCCGAAAGTGTCTGTGCGTTCCATCCGGTACATACGGCCGCAGAGAAGAATGCCCCTGTTACAACAATTGGAAGACCAAGCAAGGC
GGCTTTAAATGCCCCTGA
Protein sequenceShow/hide protein sequence
MSILIFLFRNVSFIHKYIKIYFLSKYIFLSGKNINESGAVAAYHPNGGEGSIRIEDCPKACDCRCSTTSHRKPCLFFCNKCCRKCLCVPSGTYGRREECPCYNNWKTKQG
GFKCP