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Sed0023013 (gene) of Chayote v1 genome

Gene IDSed0023013
OrganismSechium edule (Chayote v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR13-like
Genome locationLG01:61216987..61217573
RNA-Seq ExpressionSed0023013
SyntenySed0023013
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605917.1 Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. sororia]3.7e-3367.8Show/hide
Query:  MAPLGAKMATRTRRNLPNLKLNKKMKKTTATATAK-KRQIPAIETDGVQFPDEE---GGGCSTPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSPIAFF
        MAP G KMATR RRN+   KLNKK+KKTT     + + QIP  + D VQFPD++   GGG STP+AERFRIPE +TCPP PKKQR +SDCSFRRSPIAFF
Subjt:  MAPLGAKMATRTRRNLPNLKLNKKMKKTTATATAK-KRQIPAIETDGVQFPDEE---GGGCSTPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSPIAFF

Query:  APPELELLFFASLPDISV
        APPELEL FF + PDISV
Subjt:  APPELELLFFASLPDISV

KAG7010272.1 Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-3269.75Show/hide
Query:  MAPLGAKMATRTRRNLPNLKLNKKMKKTTATATAKKRQIP-AIETDGVQFPDEE---GGGCSTPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSPIAFF
        MAP G KMATRTR NLPNLKLNKK+KKT      K +QIP AI  D V F D+     GGCSTP+AERFRIPE +TCPPAPKK R  SDCS RRSPIAFF
Subjt:  MAPLGAKMATRTRRNLPNLKLNKKMKKTTATATAKKRQIP-AIETDGVQFPDEE---GGGCSTPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSPIAFF

Query:  APPELELLFFA-SLPDISV
        APPELEL F A  +PDISV
Subjt:  APPELELLFFA-SLPDISV

KAG7035865.1 Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. argyrosperma]8.2e-3366.12Show/hide
Query:  MAPLGAKMATRTRRNLPNLKLNKKMKKTTATATAK-KRQIPAIETDGVQFPDEE------GGGCSTPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSPI
        MAP G KMATR RRN+   KLNKK+KKTT     + + QIP  + D VQFPD++      GGG STP+AERFRIPE +TCPP PKKQR +SDCSFRRSPI
Subjt:  MAPLGAKMATRTRRNLPNLKLNKKMKKTTATATAK-KRQIPAIETDGVQFPDEE------GGGCSTPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSPI

Query:  AFFAPPELELLFFASLPDISV
        AFFAPPELEL FF + PDISV
Subjt:  AFFAPPELELLFFASLPDISV

XP_022958378.1 cyclin-dependent protein kinase inhibitor SMR13-like [Cucurbita moschata]1.7e-3369.57Show/hide
Query:  MAPLGAKMATRTRRNLPNLKLNKKMKKTTATATAKKRQIPAIETDGVQFPDEE-GGGCSTPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSPIAFFAPP
        MAP GAKMATR RRN+   K+NKK+KKT  T    + QIP  + D VQFPD++ GGG STP+AERFRIPE +TCPP PKKQR +SDCSFRRSPIAFFAPP
Subjt:  MAPLGAKMATRTRRNLPNLKLNKKMKKTTATATAKKRQIPAIETDGVQFPDEE-GGGCSTPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSPIAFFAPP

Query:  ELELLFFASLPDISV
        ELEL FF + PDISV
Subjt:  ELELLFFASLPDISV

XP_022996084.1 cyclin-dependent protein kinase inhibitor SMR9-like [Cucurbita maxima]1.1e-3270.18Show/hide
Query:  MATRTRRNLPNLKLNKKMKKTTATATAK-KRQIPAIETDGVQFPDEE------GGGCSTPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSPIAFFAPPE
        MATR RRN+PN KLNKKMKKTT     + + QIP  + D VQFPD++      GGG STP+AERFRIPE +TCPP PKKQR VSDCSFRRSPIAFFAPPE
Subjt:  MATRTRRNLPNLKLNKKMKKTTATATAK-KRQIPAIETDGVQFPDEE------GGGCSTPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSPIAFFAPPE

Query:  LELLFFASLPDISV
        LEL FF S PDISV
Subjt:  LELLFFASLPDISV

TrEMBL top hitse value%identityAlignment
A0A0A0L0Q1 Uncharacterized protein1.4e-3066.94Show/hide
Query:  MAPLGAKMATR-TRRNLPNLKLNKKMKKTTATATAKKR---QIPAIETDGVQFPDE-EGGGCSTPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSPIAF
        MAP GA+MATR TRR LPNLKL KK+KKTT      ++    +P  + D V+F DE   GGCSTP+AER RIPE +TCPPAPKK RAVSDCS RRSPIAF
Subjt:  MAPLGAKMATR-TRRNLPNLKLNKKMKKTTATATAKKR---QIPAIETDGVQFPDE-EGGGCSTPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSPIAF

Query:  FAPPELELLFFASL--PDISV
        FAPPELEL FF +L  PDISV
Subjt:  FAPPELELLFFASL--PDISV

A0A6J1FTJ6 cyclin-dependent protein kinase inhibitor SMR131.1e-3067.21Show/hide
Query:  MAPLGAKMATRTRRNLPNLKLNKKMKKT---TATATAKKRQIP-AIETDGVQFPDEE---GGGCSTPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSPI
        MAP G KMATRTR NLPNLKLNKK+KKT         K +QIP AI  D V F D+     GGCSTP+AERFRIP+ +TCPPAPKK R  SDCS RRSPI
Subjt:  MAPLGAKMATRTRRNLPNLKLNKKMKKT---TATATAKKRQIP-AIETDGVQFPDEE---GGGCSTPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSPI

Query:  AFFAPPELELLFFA-SLPDISV
        AFFAPPELEL F A  +PDISV
Subjt:  AFFAPPELELLFFA-SLPDISV

A0A6J1H2X7 cyclin-dependent protein kinase inhibitor SMR13-like8.0e-3469.57Show/hide
Query:  MAPLGAKMATRTRRNLPNLKLNKKMKKTTATATAKKRQIPAIETDGVQFPDEE-GGGCSTPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSPIAFFAPP
        MAP GAKMATR RRN+   K+NKK+KKT  T    + QIP  + D VQFPD++ GGG STP+AERFRIPE +TCPP PKKQR +SDCSFRRSPIAFFAPP
Subjt:  MAPLGAKMATRTRRNLPNLKLNKKMKKTTATATAKKRQIPAIETDGVQFPDEE-GGGCSTPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSPIAFFAPP

Query:  ELELLFFASLPDISV
        ELEL FF + PDISV
Subjt:  ELELLFFASLPDISV

A0A6J1JET4 cyclin-dependent protein kinase inhibitor SMR136.3e-3168.03Show/hide
Query:  MAPLGAKMATRTRRNLPNLKLNKKMKKT---TATATAKKRQIPA-IETDGVQFPD---EEGGGCSTPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSPI
        MAP G KMATRTR NLPNLKLNKK+KKT         K +QIPA I  D V F D   +  GGCSTP+AERFRIPE +TCPPAPKK R  SDCS RRSPI
Subjt:  MAPLGAKMATRTRRNLPNLKLNKKMKKT---TATATAKKRQIPA-IETDGVQFPD---EEGGGCSTPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSPI

Query:  AFFAPPELELLFFA-SLPDISV
        AFFAPPELEL F A  +PDISV
Subjt:  AFFAPPELELLFFA-SLPDISV

A0A6J1K7R4 cyclin-dependent protein kinase inhibitor SMR9-like5.2e-3370.18Show/hide
Query:  MATRTRRNLPNLKLNKKMKKTTATATAK-KRQIPAIETDGVQFPDEE------GGGCSTPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSPIAFFAPPE
        MATR RRN+PN KLNKKMKKTT     + + QIP  + D VQFPD++      GGG STP+AERFRIPE +TCPP PKKQR VSDCSFRRSPIAFFAPPE
Subjt:  MATRTRRNLPNLKLNKKMKKTTATATAK-KRQIPAIETDGVQFPDEE------GGGCSTPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSPIAFFAPPE

Query:  LELLFFASLPDISV
        LEL FF S PDISV
Subjt:  LELLFFASLPDISV

SwissProt top hitse value%identityAlignment
F4IWB3 Cyclin-dependent protein kinase inhibitor SMR131.5e-1364.71Show/hide
Query:  GGCSTPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSPIAFFAPPELELLF
        GGC TP+A++ RIPE +TCPPAPKKQR   +C  RR  I FFAPPE+EL F
Subjt:  GGCSTPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSPIAFFAPPELELLF

Q1G3Y4 Cyclin-dependent protein kinase inhibitor SMR153.4e-0536.92Show/hide
Query:  AIETDGVQFPDEEGGGCSTPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSPIAFFAPPELELLF
        ++ +  V   ++E    +TP A+  RIP  + CPPAPKK++     S+   P  FF+PP+LE +F
Subjt:  AIETDGVQFPDEEGGGCSTPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSPIAFFAPPELELLF

Q1JPP8 Cyclin-dependent protein kinase inhibitor SMR49.8e-0544.44Show/hide
Query:  GCSTPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSP--IAFFAPPELELLFFA
        GC+TPR+  +RIP    CPP P+K+  V     +R P    +F PP+LE LF+A
Subjt:  GCSTPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSP--IAFFAPPELELLFFA

Q3ECS5 Cyclin-dependent protein kinase inhibitor SMR91.8e-1140.86Show/hide
Query:  PNLKLNKKMKKTTATATAKKRQIPAIETDGVQFPDEEGGGCSTPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSPIAFFAPPELELLFFASL
        P   +N  +  T++T+T+         +     P     GC TP  E+ RIPE +TCPPAPKKQ+   +C+ RR  IAFFAPP++EL F  +L
Subjt:  PNLKLNKKMKKTTATATAKKRQIPAIETDGVQFPDEEGGGCSTPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSPIAFFAPPELELLFFASL

Arabidopsis top hitse value%identityAlignment
AT1G51355.1 unknown protein1.3e-1240.86Show/hide
Query:  PNLKLNKKMKKTTATATAKKRQIPAIETDGVQFPDEEGGGCSTPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSPIAFFAPPELELLFFASL
        P   +N  +  T++T+T+         +     P     GC TP  E+ RIPE +TCPPAPKKQ+   +C+ RR  IAFFAPP++EL F  +L
Subjt:  PNLKLNKKMKKTTATATAKKRQIPAIETDGVQFPDEEGGGCSTPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSPIAFFAPPELELLFFASL

AT1G60783.1 unknown protein2.4e-0636.92Show/hide
Query:  AIETDGVQFPDEEGGGCSTPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSPIAFFAPPELELLF
        ++ +  V   ++E    +TP A+  RIP  + CPPAPKK++     S+   P  FF+PP+LE +F
Subjt:  AIETDGVQFPDEEGGGCSTPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSPIAFFAPPELELLF

AT3G20898.1 unknown protein1.1e-1464.71Show/hide
Query:  GGCSTPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSPIAFFAPPELELLF
        GGC TP+A++ RIPE +TCPPAPKKQR   +C  RR  I FFAPPE+EL F
Subjt:  GGCSTPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSPIAFFAPPELELLF

AT5G02220.1 unknown protein7.0e-0644.44Show/hide
Query:  GCSTPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSP--IAFFAPPELELLFFA
        GC+TPR+  +RIP    CPP P+K+  V     +R P    +F PP+LE LF+A
Subjt:  GCSTPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSP--IAFFAPPELELLFFA

AT5G40460.1 unknown protein1.3e-0441.33Show/hide
Query:  KKRQIPAIETDGVQFPDEEGGGCS-TPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSPIA--FFAPP-ELELLF
        K R  P I T+  +    E   CS TP A+  +IPE + CPPAP+K+R    C   RS +   FF PP +LE +F
Subjt:  KKRQIPAIETDGVQFPDEEGGGCS-TPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSPIA--FFAPP-ELELLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCCTTTAGGAGCAAAAATGGCTACAAGAACAAGAAGAAATCTACCCAATTTGAAGCTGAATAAGAAAATGAAGAAGACGACGGCGACGGCGACGGCAAAGAAGAG
GCAGATTCCGGCGATAGAAACCGACGGAGTTCAATTTCCCGACGAGGAGGGCGGCGGGTGCAGCACTCCGAGAGCAGAGAGATTCAGAATCCCGGAGACGGTGACGTGTC
CGCCGGCGCCGAAGAAGCAAAGAGCCGTTTCCGATTGCTCGTTCCGGCGGTCCCCGATAGCGTTTTTTGCCCCTCCGGAATTAGAGCTTCTATTCTTCGCGTCTCTGCCG
GACATTTCAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATTTGAACCCTCTACTTTCTCTCTCCTCTTTCTCTCTCTAGGGTTTTGTGGGTTTATTTCTTACCTTCAATCCCTTCTCTTTAATGGGTATCTTCCAAAATTCTCTGAAT
CCCTTCTCCTTTTAGCTCAAATTCCTTCTAAAGCTTCAATCTTTGCAGAACAGAGACCTCTGTTTTTTTACCCTTTTCAAGGCTCTGTTCTTGGGTTGTGATTTTTTTTT
TTTTTAGTAATTTCTTTGAAAAATGGCGCCTTTAGGAGCAAAAATGGCTACAAGAACAAGAAGAAATCTACCCAATTTGAAGCTGAATAAGAAAATGAAGAAGACGACGG
CGACGGCGACGGCAAAGAAGAGGCAGATTCCGGCGATAGAAACCGACGGAGTTCAATTTCCCGACGAGGAGGGCGGCGGGTGCAGCACTCCGAGAGCAGAGAGATTCAGA
ATCCCGGAGACGGTGACGTGTCCGCCGGCGCCGAAGAAGCAAAGAGCCGTTTCCGATTGCTCGTTCCGGCGGTCCCCGATAGCGTTTTTTGCCCCTCCGGAATTAGAGCT
TCTATTCTTCGCGTCTCTGCCGGACATTTCAGTTTGA
Protein sequenceShow/hide protein sequence
MAPLGAKMATRTRRNLPNLKLNKKMKKTTATATAKKRQIPAIETDGVQFPDEEGGGCSTPRAERFRIPETVTCPPAPKKQRAVSDCSFRRSPIAFFAPPELELLFFASLP
DISV