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Sed0023014 (gene) of Chayote v1 genome

Gene IDSed0023014
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG13:1504642..1505029
RNA-Seq ExpressionSed0023014
SyntenySed0023014
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067665.1 hypothetical protein E6C27_scaffold70G00340 [Cucumis melo var. makuwa]1.2e-1858.89Show/hide
Query:  MARDIRPFESGGGDGGNGGRRCRSSKFDVGDIFFGKDDVKECAWDGILTEEIVRFVEKETAMKARRKKIKRRTESFNCSEFLKFVCFFRF
        MARDI PFE GGG GG   R         GD+FFGKDD+KE AWDG+ TEE VRF+E E+A KA RK+ +R+ E FNC EFL+ VC F+F
Subjt:  MARDIRPFESGGGDGGNGGRRCRSSKFDVGDIFFGKDDVKECAWDGILTEEIVRFVEKETAMKARRKKIKRRTESFNCSEFLKFVCFFRF

KAG6576802.1 hypothetical protein SDJN03_24376, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1556.52Show/hide
Query:  MARDIRPFESGGGDGGNGGRRCRS-SKFD-VGDIFFGKDDVKECAWDGILTEEIVRFVEKETAMKARRKKIKRRTESFNCSEFLKFVCFFRF
        MARD  P+E G    G GG+ C S SK+D VGDIFFGKDD+K   WD + TEE VRF+E E+A++  RK+ KRR E+F C EFLKF+  F F
Subjt:  MARDIRPFESGGGDGGNGGRRCRS-SKFD-VGDIFFGKDDVKECAWDGILTEEIVRFVEKETAMKARRKKIKRRTESFNCSEFLKFVCFFRF

KAG6600176.1 hypothetical protein SDJN03_05409, partial [Cucurbita argyrosperma subsp. sororia]1.7e-0955Show/hide
Query:  MARDIRPFESGGGDGGNGGRRC-----RSSKFD-VGDIFFGKDDVKECAWDGILTEEIVRFVEKETAMKARRKKIKRRTE
        MA D  PFE GG   G+GGRRC     R SK+D VGDIFFGKDD+KE AWDG  TE+ VRF+  ET  +     +KR +E
Subjt:  MARDIRPFESGGGDGGNGGRRC-----RSSKFD-VGDIFFGKDDVKECAWDGILTEEIVRFVEKETAMKARRKKIKRRTE

KAG7030840.1 hypothetical protein SDJN02_04877, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-1047.06Show/hide
Query:  MARDIRPFESGGGDGGNGGRRC-----RSSKFD-VGDIFFGKDDVKECAWDGILTEEIVRFVEKETAMKARRKKIKRRTESFN-------CSEFLKFVCF
        MA D  PFE GG   G+GGRRC     R SK+D VGDIFFGKDD+KE AWDG  TE+ VRF+  ET  +     +KR +E  +       C++F + + F
Subjt:  MARDIRPFESGGGDGGNGGRRC-----RSSKFD-VGDIFFGKDDVKECAWDGILTEEIVRFVEKETAMKARRKKIKRRTESFN-------CSEFLKFVCF

Query:  FR
         R
Subjt:  FR

KGN57263.1 hypothetical protein Csa_009618 [Cucumis sativus]3.8e-1758.89Show/hide
Query:  MARDIRPFESGGGDGGNGGRRCRSSKFDVGDIFFGKDDVKECAWDGILTEEIVRFVEKETAMKARRKKIKRRTESFNCSEFLKFVCFFRF
        MARDI PFE GGG  G   R         GDIFFGKDD+KE AWDG+ TEE VRF+E E+A KA RK+ +R+ E FNC EFLK V  F+F
Subjt:  MARDIRPFESGGGDGGNGGRRCRSSKFDVGDIFFGKDDVKECAWDGILTEEIVRFVEKETAMKARRKKIKRRTESFNCSEFLKFVCFFRF

TrEMBL top hitse value%identityAlignment
A0A0A0L658 Uncharacterized protein1.8e-1758.89Show/hide
Query:  MARDIRPFESGGGDGGNGGRRCRSSKFDVGDIFFGKDDVKECAWDGILTEEIVRFVEKETAMKARRKKIKRRTESFNCSEFLKFVCFFRF
        MARDI PFE GGG  G   R         GDIFFGKDD+KE AWDG+ TEE VRF+E E+A KA RK+ +R+ E FNC EFLK V  F+F
Subjt:  MARDIRPFESGGGDGGNGGRRCRSSKFDVGDIFFGKDDVKECAWDGILTEEIVRFVEKETAMKARRKKIKRRTESFNCSEFLKFVCFFRF

A0A5D3DK72 Uncharacterized protein5.7e-1958.89Show/hide
Query:  MARDIRPFESGGGDGGNGGRRCRSSKFDVGDIFFGKDDVKECAWDGILTEEIVRFVEKETAMKARRKKIKRRTESFNCSEFLKFVCFFRF
        MARDI PFE GGG GG   R         GD+FFGKDD+KE AWDG+ TEE VRF+E E+A KA RK+ +R+ E FNC EFL+ VC F+F
Subjt:  MARDIRPFESGGGDGGNGGRRCRSSKFDVGDIFFGKDDVKECAWDGILTEEIVRFVEKETAMKARRKKIKRRTESFNCSEFLKFVCFFRF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGAGATATCCGCCCGTTCGAATCCGGCGGCGGCGACGGCGGAAACGGCGGCCGTCGCTGCCGATCTTCGAAATTCGACGTCGGAGACATTTTCTTCGGTAAGGA
TGATGTGAAAGAATGCGCATGGGATGGAATTTTGACGGAAGAAATTGTTCGATTCGTTGAGAAAGAAACCGCCATGAAAGCTCGGCGAAAGAAAATCAAGCGAAGAACAG
AATCGTTCAATTGCTCCGAGTTCTTGAAATTCGTCTGTTTCTTCAGATTCTAA
mRNA sequenceShow/hide mRNA sequence
TATAAATACAACCATTAAAAAAAAAACCTCACAAAAACCCATCGATTAGAAATACACAGAAAGACCTGTTCTCTTCAATGGCCAGAGATATCCGCCCGTTCGAATCCGGC
GGCGGCGACGGCGGAAACGGCGGCCGTCGCTGCCGATCTTCGAAATTCGACGTCGGAGACATTTTCTTCGGTAAGGATGATGTGAAAGAATGCGCATGGGATGGAATTTT
GACGGAAGAAATTGTTCGATTCGTTGAGAAAGAAACCGCCATGAAAGCTCGGCGAAAGAAAATCAAGCGAAGAACAGAATCGTTCAATTGCTCCGAGTTCTTGAAATTCG
TCTGTTTCTTCAGATTCTAACTCTCTTTTTTGTTTTCTTCTTTATTGATCGATTCGGA
Protein sequenceShow/hide protein sequence
MARDIRPFESGGGDGGNGGRRCRSSKFDVGDIFFGKDDVKECAWDGILTEEIVRFVEKETAMKARRKKIKRRTESFNCSEFLKFVCFFRF