CuGenDBv2

Gene ID	Sed0023025
Organism	Sechium edule (Chayote v1)
Description	40S ribosomal protein S25
Genome location	LG01:25179713..25182037
RNA-Seq Expression	Sed0023025
Synteny	Sed0023025
Gene Ontology terms	GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR004977 - Ribosomal protein S25

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

ABK21138.1 unknown [Picea sitchensis]

9.5e-47

97.22

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Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKK+KAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDR+RINGSLAR+AIKDLMARGSIRMISAHSSQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

KAB1225403.1 40S ribosomal protein S25 [Morella rubra]

2.5e-47

98.15

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Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPS+LSDR+RINGSLARRAIKDLMARGSIRMISAHSSQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

XP_015901074.2 40S ribosomal protein S25-like [Ziziphus jujuba]

4.2e-47

98.15

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Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDR+RINGSLARRAIKDLMARGSIRMISAH+SQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

XP_030489106.1 40S ribosomal protein S25-2 [Cannabis sativa]

9.5e-47

98.15

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Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDR+RINGSLARRAIKDLMARG IRMISAHSSQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

XP_040991539.1 40S ribosomal protein S25 [Juglans microcarpa x Juglans regia]

7.2e-47

98.15

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Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDR+RI+GSLARRAIKDLMARGSIRMISAHSSQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

TrEMBL top hits

e value

%identity

Alignment

A0A6A1WKZ3 40S ribosomal protein S25

1.2e-47

98.15

Show/hide

Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPS+LSDR+RINGSLARRAIKDLMARGSIRMISAHSSQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

A0A6P4BPI4 40S ribosomal protein S25

2.1e-47

98.15

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Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDR+RINGSLARRAIKDLMARGSIRMISAH+SQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

A0A7J6I112 40S ribosomal protein S25

4.6e-47

98.15

Show/hide

Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDR+RINGSLARRAIKDLMARG IRMISAHSSQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

A0A803QUQ2 Uncharacterized protein

4.6e-47

98.15

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Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDR+RINGSLARRAIKDLMARG IRMISAHSSQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

A9NKH7 40S ribosomal protein S25

4.6e-47

97.22

Show/hide

Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKK+KAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDR+RINGSLAR+AIKDLMARGSIRMISAHSSQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

SwissProt top hits

e value

%identity

Alignment

P46301 40S ribosomal protein S25

1.7e-46

89.81

Show/hide

Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKK +APPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFD++TYDKLLSEAPKYKLITPS+LSDR+RI+GSLAR+AI+DLMARGSIRM+SAH+SQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

Q8GYL5 40S ribosomal protein S25-3

2.9e-46

90.65

Show/hide

Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPK+KLITPSILSDR+RINGSLARRAI++LMA+G+IRM+SAHSSQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRATN
        IYTRAT+
Subjt:  IYTRATN

Q9SIK2 40S ribosomal protein S25-2

1.3e-46

90.74

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Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL+EAPK+KLITPSILSDRMRINGSLARRAI++LMA+G IRM+SAHSSQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

Q9SIW5 40S ribosomal protein S25-1

3.5e-44

87.74

Show/hide

Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKL+SEAPK+KLITPSILSDR+RINGSLAR+AI+DLM +G+IRM+S HSSQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRAT
        I TRAT
Subjt:  IYTRAT

Q9T029 40S ribosomal protein S25-4

9.8e-47

90.74

Show/hide

Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLL+EAPK+KLITPSILSDRMRINGSLARRAI++LMA+G IRM++AHSSQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

Arabidopsis top hits

e value

%identity

Alignment

AT2G21580.1 Ribosomal protein S25 family protein

9.1e-48

90.74

Show/hide

Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL+EAPK+KLITPSILSDRMRINGSLARRAI++LMA+G IRM+SAHSSQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

AT2G21580.2 Ribosomal protein S25 family protein

5.0e-46

89.81

Show/hide

Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKK+K PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQ TYDKLL+EAPK+KLITPSILSDRMRINGSLARRAI++LMA+G IRM+SAHSSQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

AT4G34555.1 Ribosomal protein S25 family protein

2.0e-47

90.65

Show/hide

Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPK+KLITPSILSDR+RINGSLARRAI++LMA+G+IRM+SAHSSQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRATN
        IYTRAT+
Subjt:  IYTRATN

AT4G39200.1 Ribosomal protein S25 family protein

7.0e-48

90.74

Show/hide

Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLL+EAPK+KLITPSILSDRMRINGSLARRAI++LMA+G IRM++AHSSQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

AT4G39200.2 Ribosomal protein S25 family protein

3.8e-46

89.81

Show/hide

Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ
        MAPKK+K PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQATYDKLL+EAPK+KLITPSILSDRMRINGSLARRAI++LMA+G IRM++AHSSQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGCCGAAGAAGGAGAAAGCTCCCCCACCGTCCTCCAAGCCCGCTAAATCTGGCGGAGGAAAACAGAAGAAGAAGAAATGGAGCAAAGGTAAGCAAAAGGAGAAGGT
CAACAACATGGTTTTGTTTGATCAGGCAACTTATGATAAGCTTCTTTCCGAGGCTCCCAAGTACAAGCTAATCACTCCTTCAATCCTTTCTGATAGGATGAGGATCAATG
GGTCACTTGCACGAAGAGCAATCAAGGATTTGATGGCACGTGGTTCAATCAGGATGATTTCTGCCCATTCCAGTCAGCAGATCTACACAAGAGCAACCAACACCTAG

mRNA sequence

Show/hide mRNA sequence

GAAAATTCTGTTGGTACTATATATACTCCCCCCTCCGACCTGAACACTTCTTCGTTCCAGCCGAAACCTCTGCTACGCCTTCTCTGAAAACCCTAGAAATCAGATTTCAT
GGCGCCGAAGAAGGAGAAAGCTCCCCCACCGTCCTCCAAGCCCGCTAAATCTGGCGGAGGAAAACAGAAGAAGAAGAAATGGAGCAAAGGTAAGCAAAAGGAGAAGGTCA
ACAACATGGTTTTGTTTGATCAGGCAACTTATGATAAGCTTCTTTCCGAGGCTCCCAAGTACAAGCTAATCACTCCTTCAATCCTTTCTGATAGGATGAGGATCAATGGG
TCACTTGCACGAAGAGCAATCAAGGATTTGATGGCACGTGGTTCAATCAGGATGATTTCTGCCCATTCCAGTCAGCAGATCTACACAAGAGCAACCAACACCTAGACGTG
AAGTGATGTTTTTCCATTTTACGATTGAGTATTGTTCAATGATGAGATTAGATTTTTTGGTGTCTTAATTGCCGGATCATTTCTAAATGTGATGTGTTTTTAGTTTGTTA
ATGTCATTCAGGATCTCCTCAATCTCATGGCTGCTATGATATTTTTGGTTGAAATGTCATTTTGGTACTTGAGTTATTGGTAAGTCAAGATTTTTTGTAGTTATAATCAT
AATTGATTTTTAACTTGAGAGGCACTGGTGGGACAAGTTCCAACGGACATAACACTGGATCTATTTGGGGTTGAAGATGATCTTGTTGAGGTTTGTTACAATCTTACCTG
CGAGGAATAATTGGGTTGGGAAGAGGCTTTTTCCATGGAATCTAGTTTGTGGTTTGCGTCCATGTGTTTACTTGGTCTAGCAGAGGAAGTTAAACTGGACTGATAGATAG
TTGGACCAAGTCCGTTTGAGTGAATCAAGCCATCAGTTTGACTAGTCTGGTTTCGTTATGGGGTCGAACCAGTTAATCTCTCGATCCACTTTTCATCCTTAGGATTCATC
TAACACATTCTATCTGTTA

Protein sequence

Show/hide protein sequence

MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT

Sed0023025 (gene) of Chayote v1 genome