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Sed0023067 (gene) of Chayote v1 genome

Gene IDSed0023067
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG07:8862815..8863301
RNA-Seq ExpressionSed0023067
SyntenySed0023067
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061157.1 hypothetical protein E6C27_scaffold753G00260 [Cucumis melo var. makuwa]9.2e-1161.43Show/hide
Query:  MAARPAAALSFVLAVLLLVCIANAHEGHNHTMPMEPTSAPPVGHNAAVTNSFSYSWSMAMAMVAASWMMF
        MAARP+A LS +L  LLL+ + NAHEGH H    E   APP  HNAA+ NS SY WSMAMAMVAAS  +F
Subjt:  MAARPAAALSFVLAVLLLVCIANAHEGHNHTMPMEPTSAPPVGHNAAVTNSFSYSWSMAMAMVAASWMMF

KAG6576850.1 hypothetical protein SDJN03_24424, partial [Cucurbita argyrosperma subsp. sororia]3.2e-1161.97Show/hide
Query:  MAARPAAALSFVLAVLLLVCIANAHEGHNHTMPMEPTSAPPVGHNAA-VTNSFSYSWSMAMAMVAASWMMF
        MAARP+A L+ VL  LLLV +A AHEGH H    +P  APP  HNAA   NS SY WSMA+AMVA+SWM+F
Subjt:  MAARPAAALSFVLAVLLLVCIANAHEGHNHTMPMEPTSAPPVGHNAA-VTNSFSYSWSMAMAMVAASWMMF

KAG7030901.1 Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]2.3e-1772.86Show/hide
Query:  MAARPAAALSFVLAVLLLVCIANAHEGHNHTMPMEPTSAPPVGHNAAVTNSFSYSWSMAMAMVAASWMMF
        MAARP+A LSFVLAVLLLV +AN HEGH H    EPT++PP G NAA+ NSFSYSWSM MAMVA SWM+F
Subjt:  MAARPAAALSFVLAVLLLVCIANAHEGHNHTMPMEPTSAPPVGHNAAVTNSFSYSWSMAMAMVAASWMMF

KGN53725.1 hypothetical protein Csa_014716 [Cucumis sativus]7.6e-1363.77Show/hide
Query:  MAARPAAALSFVLAVLLLVCIANAHEGHNHTMPMEPTSAPPVGHNAAVTNSFSYSWSMAMAMVAASWMM
        MAA P+A LS VL  LLL+C+ANAHEGH H    E   APP  H+AA+ NS SY WSMAMAMVAASW++
Subjt:  MAARPAAALSFVLAVLLLVCIANAHEGHNHTMPMEPTSAPPVGHNAAVTNSFSYSWSMAMAMVAASWMM

TYK29918.1 hypothetical protein E5676_scaffold652G00020 [Cucumis melo var. makuwa]1.2e-1061.43Show/hide
Query:  MAARPAAALSFVLAVLLLVCIANAHEGHNHTMPMEPTSAPPVGHNAAVTNSFSYSWSMAMAMVAASWMMF
        MAARP+A LS +L  LLL+ + NAHEGH H    E   APP  HNAA+ NS SY WSMAMAMVAAS  +F
Subjt:  MAARPAAALSFVLAVLLLVCIANAHEGHNHTMPMEPTSAPPVGHNAAVTNSFSYSWSMAMAMVAASWMMF

TrEMBL top hitse value%identityAlignment
A0A0A0KVS3 Uncharacterized protein3.7e-1363.77Show/hide
Query:  MAARPAAALSFVLAVLLLVCIANAHEGHNHTMPMEPTSAPPVGHNAAVTNSFSYSWSMAMAMVAASWMM
        MAA P+A LS VL  LLL+C+ANAHEGH H    E   APP  H+AA+ NS SY WSMAMAMVAASW++
Subjt:  MAARPAAALSFVLAVLLLVCIANAHEGHNHTMPMEPTSAPPVGHNAAVTNSFSYSWSMAMAMVAASWMM

A0A5A7V2Q5 Uncharacterized protein4.5e-1161.43Show/hide
Query:  MAARPAAALSFVLAVLLLVCIANAHEGHNHTMPMEPTSAPPVGHNAAVTNSFSYSWSMAMAMVAASWMMF
        MAARP+A LS +L  LLL+ + NAHEGH H    E   APP  HNAA+ NS SY WSMAMAMVAAS  +F
Subjt:  MAARPAAALSFVLAVLLLVCIANAHEGHNHTMPMEPTSAPPVGHNAAVTNSFSYSWSMAMAMVAASWMMF

A0A5D3E2A2 Uncharacterized protein5.8e-1161.43Show/hide
Query:  MAARPAAALSFVLAVLLLVCIANAHEGHNHTMPMEPTSAPPVGHNAAVTNSFSYSWSMAMAMVAASWMMF
        MAARP+A LS +L  LLL+ + NAHEGH H    E   APP  HNAA+ NS SY WSMAMAMVAAS  +F
Subjt:  MAARPAAALSFVLAVLLLVCIANAHEGHNHTMPMEPTSAPPVGHNAAVTNSFSYSWSMAMAMVAASWMMF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCTCGTCCCGCCGCAGCTCTCAGCTTCGTGCTCGCCGTGCTGCTGCTTGTTTGCATTGCTAATGCGCACGAGGGCCACAACCATACTATGCCCATGGAGCCTAC
TTCTGCTCCACCGGTTGGGCACAACGCTGCCGTCACGAACAGCTTTTCATACTCTTGGTCTATGGCTATGGCCATGGTGGCTGCTTCTTGGATGATGTTTTGA
mRNA sequenceShow/hide mRNA sequence
CTTATATATACATTACATCTCTAATCAATATTAGTCAACTCCTCAAAAGTCTTCTCTTTTGCTATCCTTTTCCTTTTCCAATTCTTTCCTCTTAACAATGGCAGCTCGTC
CCGCCGCAGCTCTCAGCTTCGTGCTCGCCGTGCTGCTGCTTGTTTGCATTGCTAATGCGCACGAGGGCCACAACCATACTATGCCCATGGAGCCTACTTCTGCTCCACCG
GTTGGGCACAACGCTGCCGTCACGAACAGCTTTTCATACTCTTGGTCTATGGCTATGGCCATGGTGGCTGCTTCTTGGATGATGTTTTGATTTTGCTGGGGAAGAAACTA
TTTTGATTGAATGTTGTTTGAAATTCAAGTCTTTCATGAAGTTCATGGGTTTGTTTGATTATTATTGTCATTGTACCTTATTTTTAAATCTTTGTGTCATGTTGGTGTGA
GTAAAACATGTTTCATTCAAATAAAAACCATATGTTTTTTTTTAAAA
Protein sequenceShow/hide protein sequence
MAARPAAALSFVLAVLLLVCIANAHEGHNHTMPMEPTSAPPVGHNAAVTNSFSYSWSMAMAMVAASWMMF