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Sed0023103 (gene) of Chayote v1 genome

Gene IDSed0023103
OrganismSechium edule (Chayote v1)
Descriptionzinc finger protein 6-like
Genome locationLG04:32273885..32274303
RNA-Seq ExpressionSed0023103
SyntenySed0023103
Gene Ontology termsGO:0010090 - trichome morphogenesis (biological process)
GO:0050794 - regulation of cellular process (biological process)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily
IPR044299 - Zinc finger protein GIS3/ZFP5/ZFP6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013666.1 Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-1958.54Show/hide
Query:  MKLFGFSVTTAGDAEAAGKSGGAACSSHKKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLSKHPPPPPPPPPSAAAPPPPPS------------AA
        MKLFG+SVT      +A  S GA C++H KRF+CQFCGR+FANSQALGGHQNAHKRER LAKQL       P PPPSA    PPP+              
Subjt:  MKLFGFSVTTAGDAEAAGKSGGAACSSHKKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLSKHPPPPPPPPPSAAAPPPPPS------------AA

Query:  DLNRE-IGVDLHLSLAPSS-RIF
        ++N E  GVDLHLSLAPSS RIF
Subjt:  DLNRE-IGVDLHLSLAPSS-RIF

XP_022138610.1 zinc finger protein 5-like [Momordica charantia]1.7e-1956.67Show/hide
Query:  MKLFGFSVTTAGDAEAAGKSGGAACSSHKKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQL-----------SKHPPPPPPPPPSAAAPPPPPSAAD
        MKLFGFSVT          +  A  +  +KRFECQFCGRDFANSQALGGHQNAHKRERHLAKQL           +KHP       P AA   PPP A +
Subjt:  MKLFGFSVTTAGDAEAAGKSGGAACSSHKKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQL-----------SKHPPPPPPPPPSAAAPPPPPSAAD

Query:  LNREIGVDLHLSLAPSSRIF
        +  + GVDLHL+LAPSS IF
Subjt:  LNREIGVDLHLSLAPSSRIF

XP_022959394.1 zinc finger protein 6-like [Cucurbita moschata]1.3e-1958.54Show/hide
Query:  MKLFGFSVTTAGDAEAAGKSGGAACSSHKKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLSKHPPPPPPPPPSAAAPPPPPS------------AA
        MKLFG+SV       +A  S GA C++H KRF+CQFCGR+FANSQALGGHQNAHKRER LAKQL       P PPPSAA   PPP+              
Subjt:  MKLFGFSVTTAGDAEAAGKSGGAACSSHKKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLSKHPPPPPPPPPSAAAPPPPPS------------AA

Query:  DLNRE-IGVDLHLSLAPSS-RIF
        ++N E  GVDLHLSLAPSS RIF
Subjt:  DLNRE-IGVDLHLSLAPSS-RIF

XP_023006285.1 zinc finger protein 6-like [Cucurbita maxima]2.1e-2062.6Show/hide
Query:  MKLFGFSVTTAGDAEAAGKSGGAACSSHKKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLSKHPPPPPPPPPSAA--APPP--------PPS--AA
        MKLFG+SVT      +A  S GA C++H KRFECQFCGR+FANSQALGGHQNAHKRER LAKQL       P PPPSAA  +PPP        PPS    
Subjt:  MKLFGFSVTTAGDAEAAGKSGGAACSSHKKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLSKHPPPPPPPPPSAA--APPP--------PPS--AA

Query:  DLNRE-IGVDLHLSLAPSS-RIF
        ++N E  GVDLHLSLAPSS RIF
Subjt:  DLNRE-IGVDLHLSLAPSS-RIF

XP_023548316.1 zinc finger protein 6-like [Cucurbita pepo subsp. pepo]3.5e-2059.35Show/hide
Query:  MKLFGFSVTTAGDAEAAGKSGGAACSSHKKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLSKHPPPPPPPPPSAAAPPPPPS------------AA
        MKLFG+SVT      +A  S GA C++H KRF+CQFCGR+FANSQALGGHQNAHKRER LAKQL       P PPPSAA   PPP+              
Subjt:  MKLFGFSVTTAGDAEAAGKSGGAACSSHKKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLSKHPPPPPPPPPSAAAPPPPPS------------AA

Query:  DLNRE-IGVDLHLSLAPSS-RIF
        ++N E  GVDLHLSLAPSS RIF
Subjt:  DLNRE-IGVDLHLSLAPSS-RIF

TrEMBL top hitse value%identityAlignment
A0A6J1C9X8 zinc finger protein 5-like8.4e-2056.67Show/hide
Query:  MKLFGFSVTTAGDAEAAGKSGGAACSSHKKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQL-----------SKHPPPPPPPPPSAAAPPPPPSAAD
        MKLFGFSVT          +  A  +  +KRFECQFCGRDFANSQALGGHQNAHKRERHLAKQL           +KHP       P AA   PPP A +
Subjt:  MKLFGFSVTTAGDAEAAGKSGGAACSSHKKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQL-----------SKHPPPPPPPPPSAAAPPPPPSAAD

Query:  LNREIGVDLHLSLAPSSRIF
        +  + GVDLHL+LAPSS IF
Subjt:  LNREIGVDLHLSLAPSSRIF

A0A6J1EQN3 zinc finger protein 6-like8.4e-2059.52Show/hide
Query:  MKLFGFSVTTAGDAEAAGKSGGAACSS---HKKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLSKHPPPPP-----PPPPSAA-----APPPPPSA
        MKLFGFSVT +  A     + GA C++     KRFECQFCGR+FANSQALGGHQNAHKRER LAKQL   P   P      PPPSA      +   PPSA
Subjt:  MKLFGFSVTTAGDAEAAGKSGGAACSS---HKKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLSKHPPPPP-----PPPPSAA-----APPPPPSA

Query:  A----DLNREIGVDLHLSLAPSSRIF
        A    ++N E GVDLHLSLAPSSRIF
Subjt:  A----DLNREIGVDLHLSLAPSSRIF

A0A6J1H7Y0 zinc finger protein 6-like6.5e-2058.54Show/hide
Query:  MKLFGFSVTTAGDAEAAGKSGGAACSSHKKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLSKHPPPPPPPPPSAAAPPPPPS------------AA
        MKLFG+SV       +A  S GA C++H KRF+CQFCGR+FANSQALGGHQNAHKRER LAKQL       P PPPSAA   PPP+              
Subjt:  MKLFGFSVTTAGDAEAAGKSGGAACSSHKKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLSKHPPPPPPPPPSAAAPPPPPS------------AA

Query:  DLNRE-IGVDLHLSLAPSS-RIF
        ++N E  GVDLHLSLAPSS RIF
Subjt:  DLNRE-IGVDLHLSLAPSS-RIF

A0A6J1KF91 zinc finger protein 6-like8.4e-2059.52Show/hide
Query:  MKLFGFSVTTAGDAEAAGKSGGAACSS---HKKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLSKHPPPPP-----PPPPSAA-----APPPPPSA
        MKLFGFSVT +  A     + GA C++     KRFECQFCGR+FANSQALGGHQNAHKRER LAKQL   P   P      PPPSA      +   PPSA
Subjt:  MKLFGFSVTTAGDAEAAGKSGGAACSS---HKKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLSKHPPPPP-----PPPPSAA-----APPPPPSA

Query:  A----DLNREIGVDLHLSLAPSSRIF
        A    ++N E GVDLHLSLAPSSRIF
Subjt:  A----DLNREIGVDLHLSLAPSSRIF

A0A6J1KZQ7 zinc finger protein 6-like1.0e-2062.6Show/hide
Query:  MKLFGFSVTTAGDAEAAGKSGGAACSSHKKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLSKHPPPPPPPPPSAA--APPP--------PPS--AA
        MKLFG+SVT      +A  S GA C++H KRFECQFCGR+FANSQALGGHQNAHKRER LAKQL       P PPPSAA  +PPP        PPS    
Subjt:  MKLFGFSVTTAGDAEAAGKSGGAACSSHKKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLSKHPPPPPPPPPSAA--APPP--------PPS--AA

Query:  DLNRE-IGVDLHLSLAPSS-RIF
        ++N E  GVDLHLSLAPSS RIF
Subjt:  DLNRE-IGVDLHLSLAPSS-RIF

SwissProt top hitse value%identityAlignment
Q39264 Zinc finger protein 51.0e-0948.57Show/hide
Query:  MKLFGFSVTTAG------DAEAAGKSGGAACSSHKKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQL
        +KLFGF + +         AE+   S      +  KR ECQ+CG++FANSQALGGHQNAHK+ER   K+L
Subjt:  MKLFGFSVTTAG------DAEAAGKSGGAACSSHKKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQL

Q39265 Zinc finger protein 61.6e-0736.51Show/hide
Query:  MKLFGFSV--TTAGDAEAAGKSGGAACSSHKKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLSK------------HPPPPP------PPPPSAAA
        +KLFG ++  TT+   +++    G+   S  +++ECQ+C R+FANSQALGGHQNAHK+ER L K+               HP   P      P P   + 
Subjt:  MKLFGFSV--TTAGDAEAAGKSGGAACSSHKKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLSK------------HPPPPP------PPPPSAAA

Query:  PPPPPSAADLNREIGVDLHLSLAPSS
        P PPP             H+ L+PSS
Subjt:  PPPPPSAADLNREIGVDLHLSLAPSS

Q84WI0 Zinc finger protein GIS4.9e-0972.97Show/hide
Query:  SHKKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQ
        SH +RFEC +C R+F  SQALGGHQNAHKRER LAK+
Subjt:  SHKKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQ

Q9C9H1 Zinc finger protein GIS31.6e-0747.46Show/hide
Query:  GFSVTTAGDAEAAGKSGGAACSSHKKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQ
        G S  + G   + G  GG      ++++ECQ+C R+F NSQALGGHQNAHK+ER   K+
Subjt:  GFSVTTAGDAEAAGKSGGAACSSHKKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQ

Q9FG05 Zinc finger protein GIS22.1e-0761.54Show/hide
Query:  KKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLSKH
        +KRF+C +C R+F  SQALGGHQNAHKRER   K+ + H
Subjt:  KKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLSKH

Arabidopsis top hitse value%identityAlignment
AT1G10480.1 zinc finger protein 57.1e-1148.57Show/hide
Query:  MKLFGFSVTTAG------DAEAAGKSGGAACSSHKKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQL
        +KLFGF + +         AE+   S      +  KR ECQ+CG++FANSQALGGHQNAHK+ER   K+L
Subjt:  MKLFGFSVTTAG------DAEAAGKSGGAACSSHKKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQL

AT1G67030.1 zinc finger protein 61.1e-0836.51Show/hide
Query:  MKLFGFSV--TTAGDAEAAGKSGGAACSSHKKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLSK------------HPPPPP------PPPPSAAA
        +KLFG ++  TT+   +++    G+   S  +++ECQ+C R+FANSQALGGHQNAHK+ER L K+               HP   P      P P   + 
Subjt:  MKLFGFSV--TTAGDAEAAGKSGGAACSSHKKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLSK------------HPPPPP------PPPPSAAA

Query:  PPPPPSAADLNREIGVDLHLSLAPSS
        P PPP             H+ L+PSS
Subjt:  PPPPPSAADLNREIGVDLHLSLAPSS

AT1G68360.1 C2H2 and C2HC zinc fingers superfamily protein1.1e-0847.46Show/hide
Query:  GFSVTTAGDAEAAGKSGGAACSSHKKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQ
        G S  + G   + G  GG      ++++ECQ+C R+F NSQALGGHQNAHK+ER   K+
Subjt:  GFSVTTAGDAEAAGKSGGAACSSHKKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQ

AT3G58070.1 C2H2 and C2HC zinc fingers superfamily protein3.5e-1072.97Show/hide
Query:  SHKKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQ
        SH +RFEC +C R+F  SQALGGHQNAHKRER LAK+
Subjt:  SHKKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQ

AT5G06650.1 C2H2 and C2HC zinc fingers superfamily protein1.5e-0861.54Show/hide
Query:  KKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLSKH
        +KRF+C +C R+F  SQALGGHQNAHKRER   K+ + H
Subjt:  KKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLSKH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAATGAAGCTGTTTGGGTTTTCAGTGACGACGGCCGGTGATGCTGAAGCTGCGGGCAAGTCGGGCGGCGCGGCGTGTTCGAGCCACAAGAAGAGATTCGAGTGCCA
ATTCTGCGGCCGCGACTTCGCCAATTCTCAGGCCCTTGGCGGCCACCAGAACGCCCACAAGCGCGAGCGCCACCTCGCCAAACAACTCTCTAAACACCCACCGCCGCCGC
CCCCACCGCCGCCCTCCGCCGCCGCTCCGCCACCGCCGCCCTCCGCCGCTGACCTGAATCGGGAAATTGGCGTTGATCTCCACCTCAGCCTCGCACCTTCCTCCAGGATC
TTCTACTGA
mRNA sequenceShow/hide mRNA sequence
GTGATGATAATGAAGCTGTTTGGGTTTTCAGTGACGACGGCCGGTGATGCTGAAGCTGCGGGCAAGTCGGGCGGCGCGGCGTGTTCGAGCCACAAGAAGAGATTCGAGTG
CCAATTCTGCGGCCGCGACTTCGCCAATTCTCAGGCCCTTGGCGGCCACCAGAACGCCCACAAGCGCGAGCGCCACCTCGCCAAACAACTCTCTAAACACCCACCGCCGC
CGCCCCCACCGCCGCCCTCCGCCGCCGCTCCGCCACCGCCGCCCTCCGCCGCTGACCTGAATCGGGAAATTGGCGTTGATCTCCACCTCAGCCTCGCACCTTCCTCCAGG
ATCTTCTACTGAAGCTAAGAAATGTTGTTTTTTTCTTTTTTTTTTTTAATGGAAAAAAAAATGTGAGGTTTGAGAAAAGCAGTAATTAC
Protein sequenceShow/hide protein sequence
MIMKLFGFSVTTAGDAEAAGKSGGAACSSHKKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLSKHPPPPPPPPPSAAAPPPPPSAADLNREIGVDLHLSLAPSSRI
FY