; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0023159 (gene) of Chayote v1 genome

Gene IDSed0023159
OrganismSechium edule (Chayote v1)
DescriptionGlutamyl-tRNA synthetase
Genome locationLG11:4198697..4202607
RNA-Seq ExpressionSed0023159
SyntenySed0023159
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599154.1 hypothetical protein SDJN03_08932, partial [Cucurbita argyrosperma subsp. sororia]2.4e-4367.07Show/hide
Query:  MLESRPDVNNTSDVGCSSGVNGDEEDEIDGR-----------SEMGK-RGFGKAKQVMFYPFRKAKKQILRRRVKR-SSSC---SSVSCNRRTNSSLDKR
        MLES    N+ SDVGC SGVN D +DE D R            ++GK +GFGKAK+VM YPFRKAKKQILRRR+KR SSSC   SSV C RRT+SS DKR
Subjt:  MLESRPDVNNTSDVGCSSGVNGDEEDEIDGR-----------SEMGK-RGFGKAKQVMFYPFRKAKKQILRRRVKR-SSSC---SSVSCNRRTNSSLDKR

Query:  VFDGAVNQGCCFCVGKLSISDSKKGSPSDPNSRKFTDDMLKVLIEKNDFYSKDSNPHLDVRVDT
        VFDG+VNQGC FC  KLSISDSK G P+DPN RKF+++MLKVLIEKNDFYSK+SNPHLDV + T
Subjt:  VFDGAVNQGCCFCVGKLSISDSKKGSPSDPNSRKFTDDMLKVLIEKNDFYSKDSNPHLDVRVDT

XP_008452984.1 PREDICTED: uncharacterized protein LOC103493824 [Cucumis melo]2.6e-5067.6Show/hide
Query:  MLESRPDVNNTSDVGCSSGVN--GDEED-----------------EIDGRSEMGKRGFGKAKQVMFYPFRKAKKQILRRRVKRSSSCS----------SV
        MLESR   NN SDVGC SGVN  GD+ED                 + D + EMGK+GFGKAKQVMFYPFRKAKKQILRRR+KR SSCS          SV
Subjt:  MLESRPDVNNTSDVGCSSGVN--GDEED-----------------EIDGRSEMGKRGFGKAKQVMFYPFRKAKKQILRRRVKRSSSCS----------SV

Query:  SCNRRTNSSLDKRVFDGAVNQGCCFCVGKLSISDSKKGSPSDPNSRKFTDDMLKVLIEKNDFYSKDSNPHLDVRVDTRQ
         C+RRTN SLDKR FDG+VNQGC FC+ KLSISDSK GSP+DPN RKFT++MLKVLIEKNDFYSK+SNPHLDV+VDTRQ
Subjt:  SCNRRTNSSLDKRVFDGAVNQGCCFCVGKLSISDSKKGSPSDPNSRKFTDDMLKVLIEKNDFYSKDSNPHLDVRVDTRQ

XP_011648888.1 uncharacterized protein LOC101216013 [Cucumis sativus]6.9e-5169.36Show/hide
Query:  MLESRPDVNNTSDVGCSSGVN--GDEED-----------------EIDGRSEMGKRGFGKAKQVMFYPFRKAKKQILRRRVKRSSSC----SSVSCNRRT
        MLESR   NN SDVGC SGVN  GD+ED                 + D + EMGK+GFGKAKQVMFYPFRKAKKQILRRR+KR SSC    SSV+C+RRT
Subjt:  MLESRPDVNNTSDVGCSSGVN--GDEED-----------------EIDGRSEMGKRGFGKAKQVMFYPFRKAKKQILRRRVKRSSSC----SSVSCNRRT

Query:  NSSLDKRVFDGAVNQGCCFCVGKLSISDSKKGSPSDPNSRKFTDDMLKVLIEKNDFYSKDSNPHLDVRVDTRQ
        N SLDKR FDG+VNQGC FC+ KLSISDSK GSP+DPN RKFT++MLKVLIEKNDFYSK+SNPH DV+VDTRQ
Subjt:  NSSLDKRVFDGAVNQGCCFCVGKLSISDSKKGSPSDPNSRKFTDDMLKVLIEKNDFYSKDSNPHLDVRVDTRQ

XP_022999773.1 uncharacterized protein LOC111494022 [Cucurbita maxima]3.1e-4367.07Show/hide
Query:  MLESRPDVNNTSDVGCSSGVNGDEEDEIDGR-----------SEMGK-RGFGKAKQVMFYPFRKAKKQILRRRVKR-SSSC---SSVSCNRRTNSSLDKR
        MLES    N+ SDVGC SGVN D +DE + R            ++GK +GFGKAK+VM YPFRKAKKQILRRR+KR SSSC   SSV C RRT+SS DKR
Subjt:  MLESRPDVNNTSDVGCSSGVNGDEEDEIDGR-----------SEMGK-RGFGKAKQVMFYPFRKAKKQILRRRVKR-SSSC---SSVSCNRRTNSSLDKR

Query:  VFDGAVNQGCCFCVGKLSISDSKKGSPSDPNSRKFTDDMLKVLIEKNDFYSKDSNPHLDVRVDT
        VFDG+VNQGC FC  KLSISDSK G P+DPN RKFT++MLKVLIEKNDFYSK+SNPHLDV + T
Subjt:  VFDGAVNQGCCFCVGKLSISDSKKGSPSDPNSRKFTDDMLKVLIEKNDFYSKDSNPHLDVRVDT

XP_038890967.1 uncharacterized protein LOC120080390 [Benincasa hispida]6.5e-4968.42Show/hide
Query:  MLESRPDVNNTSDVGCS-SGVNGDEED-----------------EIDGRSEMGKRGFGKAKQVMFYPFRKAKKQILRRRVK-RSSSC--SSVSCNRRTNS
        MLESR   NN SDVGCS +  +GD+ED                 + D + EMGK+GFGKAKQVMFYPFRKAKKQILRRR+K  SSSC  SSV+C R+TNS
Subjt:  MLESRPDVNNTSDVGCS-SGVNGDEED-----------------EIDGRSEMGKRGFGKAKQVMFYPFRKAKKQILRRRVK-RSSSC--SSVSCNRRTNS

Query:  SLDKRVFDGAVNQGCCFCVGKLSISDSKKGSPSDPNSRKFTDDMLKVLIEKNDFYSKDSNPHLDVRVDTRQ
        S DKR FDG+VNQGC FC  KLSISDSK GSP+DPN+RKFT++MLKVLIEKNDFYSK+SNPHLDV+VDTRQ
Subjt:  SLDKRVFDGAVNQGCCFCVGKLSISDSKKGSPSDPNSRKFTDDMLKVLIEKNDFYSKDSNPHLDVRVDTRQ

TrEMBL top hitse value%identityAlignment
A0A0A0LH19 Uncharacterized protein3.3e-5169.36Show/hide
Query:  MLESRPDVNNTSDVGCSSGVN--GDEED-----------------EIDGRSEMGKRGFGKAKQVMFYPFRKAKKQILRRRVKRSSSC----SSVSCNRRT
        MLESR   NN SDVGC SGVN  GD+ED                 + D + EMGK+GFGKAKQVMFYPFRKAKKQILRRR+KR SSC    SSV+C+RRT
Subjt:  MLESRPDVNNTSDVGCSSGVN--GDEED-----------------EIDGRSEMGKRGFGKAKQVMFYPFRKAKKQILRRRVKRSSSC----SSVSCNRRT

Query:  NSSLDKRVFDGAVNQGCCFCVGKLSISDSKKGSPSDPNSRKFTDDMLKVLIEKNDFYSKDSNPHLDVRVDTRQ
        N SLDKR FDG+VNQGC FC+ KLSISDSK GSP+DPN RKFT++MLKVLIEKNDFYSK+SNPH DV+VDTRQ
Subjt:  NSSLDKRVFDGAVNQGCCFCVGKLSISDSKKGSPSDPNSRKFTDDMLKVLIEKNDFYSKDSNPHLDVRVDTRQ

A0A1S3BWA1 uncharacterized protein LOC1034938241.3e-5067.6Show/hide
Query:  MLESRPDVNNTSDVGCSSGVN--GDEED-----------------EIDGRSEMGKRGFGKAKQVMFYPFRKAKKQILRRRVKRSSSCS----------SV
        MLESR   NN SDVGC SGVN  GD+ED                 + D + EMGK+GFGKAKQVMFYPFRKAKKQILRRR+KR SSCS          SV
Subjt:  MLESRPDVNNTSDVGCSSGVN--GDEED-----------------EIDGRSEMGKRGFGKAKQVMFYPFRKAKKQILRRRVKRSSSCS----------SV

Query:  SCNRRTNSSLDKRVFDGAVNQGCCFCVGKLSISDSKKGSPSDPNSRKFTDDMLKVLIEKNDFYSKDSNPHLDVRVDTRQ
         C+RRTN SLDKR FDG+VNQGC FC+ KLSISDSK GSP+DPN RKFT++MLKVLIEKNDFYSK+SNPHLDV+VDTRQ
Subjt:  SCNRRTNSSLDKRVFDGAVNQGCCFCVGKLSISDSKKGSPSDPNSRKFTDDMLKVLIEKNDFYSKDSNPHLDVRVDTRQ

A0A6J1FAJ4 uncharacterized protein LOC1114439015.7e-4357.87Show/hide
Query:  MLESRPDVNNTSDVGCSSGVNG------------------------DEEDEIDGRSEMGKRGFGKAKQVMFYPFRKAKKQILRRRVKRSSSCSSVSCNRR
        M ES+   N  S V CSS VNG                        D++D+ DG++E+GK+GFGKAKQVMFYPFRKAKKQILR R+KR+SSCSS   +  
Subjt:  MLESRPDVNNTSDVGCSSGVNG------------------------DEEDEIDGRSEMGKRGFGKAKQVMFYPFRKAKKQILRRRVKRSSSCSSVSCNRR

Query:  TNSSLDKRVFDGAVNQGCCFCVGKLSISDSKKGSPSDPNSRKFTDDMLKVLIEKNDFYSKDSNPHLDVRVDTRQDRYI
          +S DK V+D +VNQGC FC  K SISDSK GSP+DPN  KFTD+MLKVLIEKNDFYSK+SNPHLD +VDT+Q+  I
Subjt:  TNSSLDKRVFDGAVNQGCCFCVGKLSISDSKKGSPSDPNSRKFTDDMLKVLIEKNDFYSKDSNPHLDVRVDTRQDRYI

A0A6J1G2R9 uncharacterized protein LOC1114502622.0e-4367.07Show/hide
Query:  MLESRPDVNNTSDVGCSSGVNGDEEDEIDGR-----------SEMGK-RGFGKAKQVMFYPFRKAKKQILRRRVKR-SSSC---SSVSCNRRTNSSLDKR
        MLES    N+ SDVGC SGVN D +DE D R            ++GK +GFGKAK+VM YPFRKAKKQILRRR+KR SSSC   SSV CNRRT+SS DK 
Subjt:  MLESRPDVNNTSDVGCSSGVNGDEEDEIDGR-----------SEMGK-RGFGKAKQVMFYPFRKAKKQILRRRVKR-SSSC---SSVSCNRRTNSSLDKR

Query:  VFDGAVNQGCCFCVGKLSISDSKKGSPSDPNSRKFTDDMLKVLIEKNDFYSKDSNPHLDVRVDT
        VFDG+VNQGC FC  KLSISD K G P+DPN RKFT+ MLKVLIEKNDFYSK+SNPHLDV + T
Subjt:  VFDGAVNQGCCFCVGKLSISDSKKGSPSDPNSRKFTDDMLKVLIEKNDFYSKDSNPHLDVRVDT

A0A6J1KI22 uncharacterized protein LOC1114940221.5e-4367.07Show/hide
Query:  MLESRPDVNNTSDVGCSSGVNGDEEDEIDGR-----------SEMGK-RGFGKAKQVMFYPFRKAKKQILRRRVKR-SSSC---SSVSCNRRTNSSLDKR
        MLES    N+ SDVGC SGVN D +DE + R            ++GK +GFGKAK+VM YPFRKAKKQILRRR+KR SSSC   SSV C RRT+SS DKR
Subjt:  MLESRPDVNNTSDVGCSSGVNGDEEDEIDGR-----------SEMGK-RGFGKAKQVMFYPFRKAKKQILRRRVKR-SSSC---SSVSCNRRTNSSLDKR

Query:  VFDGAVNQGCCFCVGKLSISDSKKGSPSDPNSRKFTDDMLKVLIEKNDFYSKDSNPHLDVRVDT
        VFDG+VNQGC FC  KLSISDSK G P+DPN RKFT++MLKVLIEKNDFYSK+SNPHLDV + T
Subjt:  VFDGAVNQGCCFCVGKLSISDSKKGSPSDPNSRKFTDDMLKVLIEKNDFYSKDSNPHLDVRVDT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G05935.1 unknown protein3.0e-0434.31Show/hide
Query:  KAKQVMFYPFRKAKKQILRRRVKRSSSCSSVSCNRRTNSSLDKRVFDGAVNQGCCFCVGKLSISDSKKGSPSDPNSRKFTDDMLKVLIEKNDFYSKDSNP
        K   ++ Y   KAKK+I+ +  +R      +S N   +S   KRV         CFC           G   DP    F    L+VL++ NDF+SKDSNP
Subjt:  KAKQVMFYPFRKAKKQILRRRVKRSSSCSSVSCNRRTNSSLDKRVFDGAVNQGCCFCVGKLSISDSKKGSPSDPNSRKFTDDMLKVLIEKNDFYSKDSNP

Query:  HL
        HL
Subjt:  HL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAATCAAGACCAGATGTGAACAATACCTCAGATGTTGGTTGCAGCAGCGGCGTCAATGGCGACGAAGAAGACGAAATCGATGGAAGATCGGAGATGGGCAAAAG
GGGTTTTGGAAAGGCGAAACAGGTGATGTTCTATCCGTTCCGAAAGGCGAAGAAACAGATTCTTCGGCGTAGGGTTAAGAGATCTTCGTCGTGTTCTTCGGTTTCTTGTA
ATAGAAGAACCAATTCTTCTTTGGATAAGAGGGTTTTTGATGGGGCTGTGAATCAAGGGTGTTGTTTCTGTGTGGGGAAGCTTTCGATTTCGGATTCGAAGAAAGGGTCT
CCGAGTGACCCGAATTCGAGGAAGTTTACGGATGATATGTTGAAGGTTTTGATTGAGAAGAATGATTTCTATTCTAAAGACTCCAATCCTCATTTGGATGTTCGAGTGGA
TACTAGACAGGACCGATATATTTAA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAGAAAATACAGACAGAAAATCAGATTGTCAGTTGTTACATTTCCCATCAATTATCACAAAAGAAGCAAAATCATTGAAAATTCCCATTTCCCATTAACCCATCA
AATTGGCTGTTCATCAATTTGGAACTTTCAAATCTCCATTTCTCAATCAAACATCAAACCAAACGCAACCCAGCTTCTACTTTCTTCCAAATCCAATTGGGTCTTAATCT
CCAGTCCCCATTTGGGAATTCTCATCCATTTATGTTGGAATCAAGACCAGATGTGAACAATACCTCAGATGTTGGTTGCAGCAGCGGCGTCAATGGCGACGAAGAAGACG
AAATCGATGGAAGATCGGAGATGGGCAAAAGGGGTTTTGGAAAGGCGAAACAGGTGATGTTCTATCCGTTCCGAAAGGCGAAGAAACAGATTCTTCGGCGTAGGGTTAAG
AGATCTTCGTCGTGTTCTTCGGTTTCTTGTAATAGAAGAACCAATTCTTCTTTGGATAAGAGGGTTTTTGATGGGGCTGTGAATCAAGGGTGTTGTTTCTGTGTGGGGAA
GCTTTCGATTTCGGATTCGAAGAAAGGGTCTCCGAGTGACCCGAATTCGAGGAAGTTTACGGATGATATGTTGAAGGTTTTGATTGAGAAGAATGATTTCTATTCTAAAG
ACTCCAATCCTCATTTGGATGTTCGAGTGGATACTAGACAGGACCGATATATTTAATTGGATTTTGCTTGATGAGCATGTTCAAGTGGACACTAGACAGGAACAATAGAT
TTAATTGGGTTTTGCTTGTTGAGAGCATAAATGATAATACTCCACACTTTTGGGATTTGAAAATCTTGTTGAGATGGTGCGGGTGTCCTTTGTATGTAGTGGGGCGAAGC
TCTAATTCCCGTTTATCATAAAAAAATCGGTTGAGTTCTACCGTTATTGAAGGAGTTTTCAGTTTTTGTTCTCTCCAAGATGAATTCGACGACTTAATGTTGTTCATGGA
TTGTTAGTTTGATCAACAGTTTTTTTCATCTCTTCTTTGCCAAGCGAGTGAGAGAAATTTAGTATTCGGTGAGACTGGCATTCTGTTTAGTTTTTTGAAAGTAGCATATA
TGTTTATAGTTGAAATATATACTTCAAAGGAATATATTGATCAATTACTTATACTGAGCAAGAATATTTACATTCCACTCTTGGAATTTGAAATTCGAGTATGAGTTCTA
CAATTGTTGAAGGAGTTTTTCGTAATTATATTCTTTCCAGGATGACTCATATTTATTACGTGTACAATATGCTTAAGCCCTGTTTGATAACCATTGGGTTTTTTGTTTTT
GGTTTTTAAAATTTAAGCCTACAACAACTATGTTATCATAGGTTTTTTCTTACTTAGATATCTACCTCTCACCTATATTTGTAGAAACCAAACCAAAATTTGGAAACAAA
AAAAAGTAGATTCCAAAAAAAGTTTGTTTTTGTTTTTAAAAGTTGATTAGTATTCACTTACTTTCTTAAGAAAAGATGAATAGATTGTAGGAAGGATGAAAC
Protein sequenceShow/hide protein sequence
MLESRPDVNNTSDVGCSSGVNGDEEDEIDGRSEMGKRGFGKAKQVMFYPFRKAKKQILRRRVKRSSSCSSVSCNRRTNSSLDKRVFDGAVNQGCCFCVGKLSISDSKKGS
PSDPNSRKFTDDMLKVLIEKNDFYSKDSNPHLDVRVDTRQDRYI