; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0023197 (gene) of Chayote v1 genome

Gene IDSed0023197
OrganismSechium edule (Chayote v1)
DescriptionNusB domain-containing protein
Genome locationLG05:39927329..39931913
RNA-Seq ExpressionSed0023197
SyntenySed0023197
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0031564 - transcription antitermination (biological process)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR006027 - NusB/RsmB/TIM44
IPR011605 - NusB antitermination factor
IPR035926 - NusB-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605513.1 hypothetical protein SDJN03_02830, partial [Cucurbita argyrosperma subsp. sororia]2.1e-12682.11Show/hide
Query:  NYIYQQPNFHFTCHISGICRFPFPTKSIFPYVKDSVPHFFSQPSLRTSTSFSENSVAKERDSV-VSSIETIPKVDKSGRLCSLRAARELALSIVYAACLE
        N I  +PNFHF+  +SGICRFPFPT +I PYVK+SVP    Q SLR STSFS+NSV KE  SV VSSIE IPK+DKSGR CS RAARELALSI+YA+CLE
Subjt:  NYIYQQPNFHFTCHISGICRFPFPTKSIFPYVKDSVPHFFSQPSLRTSTSFSENSVAKERDSV-VSSIETIPKVDKSGRLCSLRAARELALSIVYAACLE

Query:  GFDPVRLFEKRLNARREPGYKFDETSLMEYNHMSFGGPPVTVETAEEADELLRKEEKDSAIEAEILSAPPKMVYNKLMLRFTRKLLVAVGERWDSHVLKI
        G DPVRLFEKRLNAR EPGY+FD+TSLMEYNHMSFGGPPVTVETAEEADELLRK+EKDSAIEAEIL+APPK+VY+KL+LRFTRKLLVAV +RWDSHVLKI
Subjt:  GFDPVRLFEKRLNARREPGYKFDETSLMEYNHMSFGGPPVTVETAEEADELLRKEEKDSAIEAEILSAPPKMVYNKLMLRFTRKLLVAVGERWDSHVLKI

Query:  EKVIPPTWKDKPAGRILELCILHLAMSEITVLGTKHPIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDVQEIDSTRAREKLVAS
        +KVIP TWKDKPAGRILELCILHLAMSEITV+GT+H IVINEAVDLAKRFCDGAAPRIINGCLRTFVKD+QE DST AR K V S
Subjt:  EKVIPPTWKDKPAGRILELCILHLAMSEITVLGTKHPIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDVQEIDSTRAREKLVAS

XP_004149639.3 uncharacterized protein LOC101216754 isoform X1 [Cucumis sativus]1.3e-12381.36Show/hide
Query:  IYQQPNFHFTCHISGICRFPFPTKSIFPYVKDSVPHFFSQPSLRTSTSFSENSVAKERDSV-VSSIETIPKVDKSGRLCSLRAARELALSIVYAACLEGF
        I  +PNFHF+ HISGIC+FPF   SI P++KDS+P F  Q SLR STSFSEN VA+ER S+ +SSIE IPKVDKSG+ CS RAARELALSIVYAACLEG 
Subjt:  IYQQPNFHFTCHISGICRFPFPTKSIFPYVKDSVPHFFSQPSLRTSTSFSENSVAKERDSV-VSSIETIPKVDKSGRLCSLRAARELALSIVYAACLEGF

Query:  DPVRLFEKRLNARREPGYKFDETSLMEYNHMSFGGPPVTVETAEEADELLRKEEKDSAIEAEILSAPPKMVYNKLMLRFTRKLLVAVGERWDSHVLKIEK
        DPVRLFEKRLNARRE GY+FD+TSLMEYNHMSFGGPPVTVET EEADELLRK+E+DS IEAEIL+APPK+VY+KL+LRFTRKLLVAVG+ WDS  LKIEK
Subjt:  DPVRLFEKRLNARREPGYKFDETSLMEYNHMSFGGPPVTVETAEEADELLRKEEKDSAIEAEILSAPPKMVYNKLMLRFTRKLLVAVGERWDSHVLKIEK

Query:  VIPPTWKDKPAGRILELCILHLAMSEITVLGTKHPIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDVQEIDSTRAREK
        VIPPTWK+KPAGRILELCILHLAMSEITV+GT+H IVINEAVDLAKRFCDGAAPRIINGCLRTFVKD++EIDS  AREK
Subjt:  VIPPTWKDKPAGRILELCILHLAMSEITVLGTKHPIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDVQEIDSTRAREK

XP_022948088.1 uncharacterized protein LOC111451776 [Cucurbita moschata]2.5e-12782.46Show/hide
Query:  NYIYQQPNFHFTCHISGICRFPFPTKSIFPYVKDSVPHFFSQPSLRTSTSFSENSVAKERDSV-VSSIETIPKVDKSGRLCSLRAARELALSIVYAACLE
        N I  +PNFHF+  +SGICRFPFPT +I PYVK+SVPH   Q SLR STSFS+NSV KE  SV VSSIE IPK+DKSGR CS RAARELALSI+YA+CLE
Subjt:  NYIYQQPNFHFTCHISGICRFPFPTKSIFPYVKDSVPHFFSQPSLRTSTSFSENSVAKERDSV-VSSIETIPKVDKSGRLCSLRAARELALSIVYAACLE

Query:  GFDPVRLFEKRLNARREPGYKFDETSLMEYNHMSFGGPPVTVETAEEADELLRKEEKDSAIEAEILSAPPKMVYNKLMLRFTRKLLVAVGERWDSHVLKI
        G DPVRLFEKRLNAR EPGY+FD+TSLMEYNHMSFGGPPVTVETAEEADELLRK+EKDSAIEAEIL+APPK+VY+KL+LRFTRKLLVAV +RWDSHVLKI
Subjt:  GFDPVRLFEKRLNARREPGYKFDETSLMEYNHMSFGGPPVTVETAEEADELLRKEEKDSAIEAEILSAPPKMVYNKLMLRFTRKLLVAVGERWDSHVLKI

Query:  EKVIPPTWKDKPAGRILELCILHLAMSEITVLGTKHPIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDVQEIDSTRAREKLVAS
        +KVIP TWKDKPAGRILELCILHLAMSEITV+GT+H IVINEAVDLAKRFCDGAAPRIINGCLRTFVKD+QE DST AR K V S
Subjt:  EKVIPPTWKDKPAGRILELCILHLAMSEITVLGTKHPIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDVQEIDSTRAREKLVAS

XP_023007062.1 uncharacterized protein LOC111499665 [Cucurbita maxima]2.7e-12682.11Show/hide
Query:  NYIYQQPNFHFTCHISGICRFPFPTKSIFPYVKDSVPHFFSQPSLRTSTSFSENSVAKERDSV-VSSIETIPKVDKSGRLCSLRAARELALSIVYAACLE
        N I  +PNFHF+ H+SGIC FPFPT +I PYVK+SVP    Q SLR STSFS+NSV KE  SV VSSIE IPK+DKSGR CS RAARELALSI+YA+CLE
Subjt:  NYIYQQPNFHFTCHISGICRFPFPTKSIFPYVKDSVPHFFSQPSLRTSTSFSENSVAKERDSV-VSSIETIPKVDKSGRLCSLRAARELALSIVYAACLE

Query:  GFDPVRLFEKRLNARREPGYKFDETSLMEYNHMSFGGPPVTVETAEEADELLRKEEKDSAIEAEILSAPPKMVYNKLMLRFTRKLLVAVGERWDSHVLKI
        G DPVRLFEKRLNAR EPGY+FD+TSLMEYNHMSFGGPPVTVETAEEADELLRK+EKDSAIEAEIL+APPK+VY+KL+LRFTRKLLVAV +RWDSHVLKI
Subjt:  GFDPVRLFEKRLNARREPGYKFDETSLMEYNHMSFGGPPVTVETAEEADELLRKEEKDSAIEAEILSAPPKMVYNKLMLRFTRKLLVAVGERWDSHVLKI

Query:  EKVIPPTWKDKPAGRILELCILHLAMSEITVLGTKHPIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDVQEIDSTRAREKLVAS
        +KVIP TWKDKPAGRILELCILHLAMSEITV+GT+H IVINEAVDLAKRFCDGAAPRIINGCLRTFVKD+QE DST AR K V S
Subjt:  EKVIPPTWKDKPAGRILELCILHLAMSEITVLGTKHPIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDVQEIDSTRAREKLVAS

XP_023532267.1 uncharacterized protein LOC111794466 [Cucurbita pepo subsp. pepo]2.7e-12681.75Show/hide
Query:  NYIYQQPNFHFTCHISGICRFPFPTKSIFPYVKDSVPHFFSQPSLRTSTSFSENSVAKERDSV-VSSIETIPKVDKSGRLCSLRAARELALSIVYAACLE
        N I  +PNFHF+ H+SGICRFPFPT +I PYVK+SVP    Q SLR STSFS+NSV KE  SV VSSIE IPK+DKSGR CS RAARELALSI+YA+CLE
Subjt:  NYIYQQPNFHFTCHISGICRFPFPTKSIFPYVKDSVPHFFSQPSLRTSTSFSENSVAKERDSV-VSSIETIPKVDKSGRLCSLRAARELALSIVYAACLE

Query:  GFDPVRLFEKRLNARREPGYKFDETSLMEYNHMSFGGPPVTVETAEEADELLRKEEKDSAIEAEILSAPPKMVYNKLMLRFTRKLLVAVGERWDSHVLKI
        G DPVRLFEKRLNAR EPGY+FD+TSLMEYNHMSFGGPPVTVETAEEADELLRK+EKDSAIEAE+L+APPK+VY+KL+LRFTRKLLVAV +RWDSHVLKI
Subjt:  GFDPVRLFEKRLNARREPGYKFDETSLMEYNHMSFGGPPVTVETAEEADELLRKEEKDSAIEAEILSAPPKMVYNKLMLRFTRKLLVAVGERWDSHVLKI

Query:  EKVIPPTWKDKPAGRILELCILHLAMSEITVLGTKHPIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDVQEIDSTRAREKLVAS
        +KVIP TWKDKPAGRILEL ILHLAMSEITV+GT+H IVINEAVDLAKRFCDGAAPRIINGCLRTFVKD+QE DST AR K V S
Subjt:  EKVIPPTWKDKPAGRILELCILHLAMSEITVLGTKHPIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDVQEIDSTRAREKLVAS

TrEMBL top hitse value%identityAlignment
A0A0A0KWZ5 NusB domain-containing protein6.1e-12481.36Show/hide
Query:  IYQQPNFHFTCHISGICRFPFPTKSIFPYVKDSVPHFFSQPSLRTSTSFSENSVAKERDSV-VSSIETIPKVDKSGRLCSLRAARELALSIVYAACLEGF
        I  +PNFHF+ HISGIC+FPF   SI P++KDS+P F  Q SLR STSFSEN VA+ER S+ +SSIE IPKVDKSG+ CS RAARELALSIVYAACLEG 
Subjt:  IYQQPNFHFTCHISGICRFPFPTKSIFPYVKDSVPHFFSQPSLRTSTSFSENSVAKERDSV-VSSIETIPKVDKSGRLCSLRAARELALSIVYAACLEGF

Query:  DPVRLFEKRLNARREPGYKFDETSLMEYNHMSFGGPPVTVETAEEADELLRKEEKDSAIEAEILSAPPKMVYNKLMLRFTRKLLVAVGERWDSHVLKIEK
        DPVRLFEKRLNARRE GY+FD+TSLMEYNHMSFGGPPVTVET EEADELLRK+E+DS IEAEIL+APPK+VY+KL+LRFTRKLLVAVG+ WDS  LKIEK
Subjt:  DPVRLFEKRLNARREPGYKFDETSLMEYNHMSFGGPPVTVETAEEADELLRKEEKDSAIEAEILSAPPKMVYNKLMLRFTRKLLVAVGERWDSHVLKIEK

Query:  VIPPTWKDKPAGRILELCILHLAMSEITVLGTKHPIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDVQEIDSTRAREK
        VIPPTWK+KPAGRILELCILHLAMSEITV+GT+H IVINEAVDLAKRFCDGAAPRIINGCLRTFVKD++EIDS  AREK
Subjt:  VIPPTWKDKPAGRILELCILHLAMSEITVLGTKHPIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDVQEIDSTRAREK

A0A1S3BNR2 uncharacterized protein LOC103491638 isoform X11.3e-12180.29Show/hide
Query:  IYQQPNFHFTCHISGICRFPFPTKSIFPYVKDSVPHFFSQPSLRTSTSFSENSVAKERDSV-VSSIETIPKVDKSGRLCSLRAARELALSIVYAACLEGF
        I  +PNFHF+ HISGIC+FPF   SI P+VK+S+P    Q SLR STSF EN VA+ER S+ VSSIETIPK+DKSG+ CS RAARELALSIVYAACLEG 
Subjt:  IYQQPNFHFTCHISGICRFPFPTKSIFPYVKDSVPHFFSQPSLRTSTSFSENSVAKERDSV-VSSIETIPKVDKSGRLCSLRAARELALSIVYAACLEGF

Query:  DPVRLFEKRLNARREPGYKFDETSLMEYNHMSFGGPPVTVETAEEADELLRKEEKDSAIEAEILSAPPKMVYNKLMLRFTRKLLVAVGERWDSHVLKIEK
        DPVRLFEKRLN+RRE GY+FD+TSLMEYNHMSFGGPPVTVET EEADELLRK+E+DS IEAEIL+APPKMVY+KL+LRFTRKLLVAV + WD+  LKIEK
Subjt:  DPVRLFEKRLNARREPGYKFDETSLMEYNHMSFGGPPVTVETAEEADELLRKEEKDSAIEAEILSAPPKMVYNKLMLRFTRKLLVAVGERWDSHVLKIEK

Query:  VIPPTWKDKPAGRILELCILHLAMSEITVLGTKHPIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDVQEIDSTRAREK
        VIPPTWK+KPAGRILELCILHLAMSEITV+GT+H IVINEAVDLAKRFCDGAAPRIINGCLRTFVKD++E DST AREK
Subjt:  VIPPTWKDKPAGRILELCILHLAMSEITVLGTKHPIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDVQEIDSTRAREK

A0A5D3DDJ4 NusB/RsmB/TIM441.3e-12180.29Show/hide
Query:  IYQQPNFHFTCHISGICRFPFPTKSIFPYVKDSVPHFFSQPSLRTSTSFSENSVAKERDSV-VSSIETIPKVDKSGRLCSLRAARELALSIVYAACLEGF
        I  +PNFHF+ HISGIC+FPF   SI P+VK+S+P    Q SLR STSF EN VA+ER S+ VSSIETIPK+DKSG+ CS RAARELALSIVYAACLEG 
Subjt:  IYQQPNFHFTCHISGICRFPFPTKSIFPYVKDSVPHFFSQPSLRTSTSFSENSVAKERDSV-VSSIETIPKVDKSGRLCSLRAARELALSIVYAACLEGF

Query:  DPVRLFEKRLNARREPGYKFDETSLMEYNHMSFGGPPVTVETAEEADELLRKEEKDSAIEAEILSAPPKMVYNKLMLRFTRKLLVAVGERWDSHVLKIEK
        DPVRLFEKRLN+RRE GY+FD+TSLMEYNHMSFGGPPVTVET EEADELLRK+E+DS IEAEIL+APPKMVY+KL+LRFTRKLLVAV + WD+  LKIEK
Subjt:  DPVRLFEKRLNARREPGYKFDETSLMEYNHMSFGGPPVTVETAEEADELLRKEEKDSAIEAEILSAPPKMVYNKLMLRFTRKLLVAVGERWDSHVLKIEK

Query:  VIPPTWKDKPAGRILELCILHLAMSEITVLGTKHPIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDVQEIDSTRAREK
        VIPPTWK+KPAGRILELCILHLAMSEITV+GT+H IVINEAVDLAKRFCDGAAPRIINGCLRTFVKD++E DST AREK
Subjt:  VIPPTWKDKPAGRILELCILHLAMSEITVLGTKHPIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDVQEIDSTRAREK

A0A6J1G8E0 uncharacterized protein LOC1114517761.2e-12782.46Show/hide
Query:  NYIYQQPNFHFTCHISGICRFPFPTKSIFPYVKDSVPHFFSQPSLRTSTSFSENSVAKERDSV-VSSIETIPKVDKSGRLCSLRAARELALSIVYAACLE
        N I  +PNFHF+  +SGICRFPFPT +I PYVK+SVPH   Q SLR STSFS+NSV KE  SV VSSIE IPK+DKSGR CS RAARELALSI+YA+CLE
Subjt:  NYIYQQPNFHFTCHISGICRFPFPTKSIFPYVKDSVPHFFSQPSLRTSTSFSENSVAKERDSV-VSSIETIPKVDKSGRLCSLRAARELALSIVYAACLE

Query:  GFDPVRLFEKRLNARREPGYKFDETSLMEYNHMSFGGPPVTVETAEEADELLRKEEKDSAIEAEILSAPPKMVYNKLMLRFTRKLLVAVGERWDSHVLKI
        G DPVRLFEKRLNAR EPGY+FD+TSLMEYNHMSFGGPPVTVETAEEADELLRK+EKDSAIEAEIL+APPK+VY+KL+LRFTRKLLVAV +RWDSHVLKI
Subjt:  GFDPVRLFEKRLNARREPGYKFDETSLMEYNHMSFGGPPVTVETAEEADELLRKEEKDSAIEAEILSAPPKMVYNKLMLRFTRKLLVAVGERWDSHVLKI

Query:  EKVIPPTWKDKPAGRILELCILHLAMSEITVLGTKHPIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDVQEIDSTRAREKLVAS
        +KVIP TWKDKPAGRILELCILHLAMSEITV+GT+H IVINEAVDLAKRFCDGAAPRIINGCLRTFVKD+QE DST AR K V S
Subjt:  EKVIPPTWKDKPAGRILELCILHLAMSEITVLGTKHPIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDVQEIDSTRAREKLVAS

A0A6J1KXJ4 uncharacterized protein LOC1114996651.3e-12682.11Show/hide
Query:  NYIYQQPNFHFTCHISGICRFPFPTKSIFPYVKDSVPHFFSQPSLRTSTSFSENSVAKERDSV-VSSIETIPKVDKSGRLCSLRAARELALSIVYAACLE
        N I  +PNFHF+ H+SGIC FPFPT +I PYVK+SVP    Q SLR STSFS+NSV KE  SV VSSIE IPK+DKSGR CS RAARELALSI+YA+CLE
Subjt:  NYIYQQPNFHFTCHISGICRFPFPTKSIFPYVKDSVPHFFSQPSLRTSTSFSENSVAKERDSV-VSSIETIPKVDKSGRLCSLRAARELALSIVYAACLE

Query:  GFDPVRLFEKRLNARREPGYKFDETSLMEYNHMSFGGPPVTVETAEEADELLRKEEKDSAIEAEILSAPPKMVYNKLMLRFTRKLLVAVGERWDSHVLKI
        G DPVRLFEKRLNAR EPGY+FD+TSLMEYNHMSFGGPPVTVETAEEADELLRK+EKDSAIEAEIL+APPK+VY+KL+LRFTRKLLVAV +RWDSHVLKI
Subjt:  GFDPVRLFEKRLNARREPGYKFDETSLMEYNHMSFGGPPVTVETAEEADELLRKEEKDSAIEAEILSAPPKMVYNKLMLRFTRKLLVAVGERWDSHVLKI

Query:  EKVIPPTWKDKPAGRILELCILHLAMSEITVLGTKHPIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDVQEIDSTRAREKLVAS
        +KVIP TWKDKPAGRILELCILHLAMSEITV+GT+H IVINEAVDLAKRFCDGAAPRIINGCLRTFVKD+QE DST AR K V S
Subjt:  EKVIPPTWKDKPAGRILELCILHLAMSEITVLGTKHPIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDVQEIDSTRAREKLVAS

SwissProt top hitse value%identityAlignment
A7GWZ7 Transcription antitermination protein NusB5.0e-0638.46Show/hide
Query:  ERWDSHVLK---IEKVIPPTWKDKPAGR--ILELCILHLAMSEITVLGTKHPIVINEAVDLAKRFCDGAAPRIINGCL
        E +D+  LK   +++++ P  K+K   R  I+EL IL L + E+   GT   ++INEA++LAK     +AP+ ING L
Subjt:  ERWDSHVLK---IEKVIPPTWKDKPAGR--ILELCILHLAMSEITVLGTKHPIVINEAVDLAKRFCDGAAPRIINGCL

B1WXY6 Transcription antitermination protein NusB2.1e-0437.33Show/hide
Query:  KIEKVIPPTWKDKPAGRI--LELCILHLAMSEITVLGTKHPIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDVQ
        +I++ +    KD    R+  ++  IL LA++EI  L     + INEAV+LAKR+ D    R ING LR F   ++
Subjt:  KIEKVIPPTWKDKPAGRI--LELCILHLAMSEITVLGTKHPIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDVQ

B1XIZ3 Transcription antitermination protein NusB5.5e-0535.35Show/hide
Query:  FTRKLLVAVGERWDSHVLKIEKVIPPTWKDKPAGRI--LELCILHLAMSEITVLGTKHPIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDVQEIDSTR
        F  ++L  +  R D    +I++VI  +  D    R+  L+  IL +A++EI  L T + + INEAV+LAKR+ D    R ING LR     ++  DS +
Subjt:  FTRKLLVAVGERWDSHVLKIEKVIPPTWKDKPAGRI--LELCILHLAMSEITVLGTKHPIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDVQEIDSTR

Q18B61 Transcription antitermination protein NusB1.1e-0537.84Show/hide
Query:  KIEKVIPPTWKDKPAGRI--LELCILHLAMSEITVLGTKHPIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDV
        KI+++I    K+    R+  +++ IL L++ EI  L T + + INEAV+LAK +CD  +P+ ING L + V ++
Subjt:  KIEKVIPPTWKDKPAGRI--LELCILHLAMSEITVLGTKHPIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDV

Q8GIR7 Transcription antitermination protein NusB2.7e-0452.08Show/hide
Query:  LELCILHLAMSEITVLGTKHPIVINEAVDLAKRFCDGAAPRIINGCLR
        L+  IL LA +EI  LGT   + INEAV+LA R+ D    R ING LR
Subjt:  LELCILHLAMSEITVLGTKHPIVINEAVDLAKRFCDGAAPRIINGCLR

Arabidopsis top hitse value%identityAlignment
AT4G26370.1 antitermination NusB domain-containing protein5.3e-8873.81Show/hide
Query:  IPKVDKSGRLCSLRAARELALSIVYAACLEGFDPVRLFEKRLNARREPGYKFDETSLMEYNHMSFGGPPVTVETAEEADELLRKEEKDSAIEAEILSAPP
        +PK+DKSGRL S RAARELAL I+YAACLEG DP+RLFEKR+NARREPGY+FD++SL+EYNHMSFGGPPV  ET EE DEL+R +EK+S IEAE+LSAPP
Subjt:  IPKVDKSGRLCSLRAARELALSIVYAACLEGFDPVRLFEKRLNARREPGYKFDETSLMEYNHMSFGGPPVTVETAEEADELLRKEEKDSAIEAEILSAPP

Query:  KMVYNKLMLRFTRKLLVAVGERWDSHVLKIEKVIPPTWKDKPAGRILELCILHLAMSEITVLGTKHPIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDV
        K+VY+KL+LRF +KLL AV ++WDSHV+ IEK+ PP WK  PAGRILE  ILHLAMSE+ VL T+HPIVINEAVDLAKRFCDG+APRIINGCLRTFVKD 
Subjt:  KMVYNKLMLRFTRKLLVAVGERWDSHVLKIEKVIPPTWKDKPAGRILELCILHLAMSEITVLGTKHPIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDV

Query:  QEIDSTRARE
            + +A E
Subjt:  QEIDSTRARE

AT4G26370.2 antitermination NusB domain-containing protein6.8e-3571.88Show/hide
Query:  IPKVDKSGRLCSLRAARELALSIVYAACLEGFDPVRLFEKRLNARREPGYKFDETSLMEYNHMSFGGPPVTVETAEEADELLRKEEKDSAIEAEIL
        +PK+DKSGRL S RAARELAL I+YAACLEG DP+RLFEKR+NARREPGY+FD++SL+EYNHMSFGGPPV  ET EE DEL+R +EK+S I   ++
Subjt:  IPKVDKSGRLCSLRAARELALSIVYAACLEGFDPVRLFEKRLNARREPGYKFDETSLMEYNHMSFGGPPVTVETAEEADELLRKEEKDSAIEAEIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCATATTTTCAAAGTTTAAGTCTTTAATCACTCCACCACTCCACCACCCTTTAGGAACCATATTTAATGAATTTATTAATACTCAAAATTTCAATTATATTTATCA
GCAGCCTAATTTTCATTTCACTTGCCACATTTCTGGAATATGCCGGTTCCCATTCCCCACTAAATCAATCTTTCCTTATGTTAAAGATTCTGTGCCACATTTCTTCTCTC
AACCCTCACTTCGAACATCTACTTCTTTCTCCGAAAATTCCGTGGCTAAGGAGCGGGATTCTGTTGTTTCTTCCATAGAAACGATTCCGAAGGTCGACAAGAGCGGGAGA
TTATGTAGCCTCAGAGCTGCTAGAGAGCTTGCTTTGTCAATTGTTTATGCAGCTTGTTTAGAAGGCTTCGATCCAGTTCGACTCTTCGAGAAGCGGTTGAATGCTCGTCG
AGAACCGGGATACAAATTTGATGAGACATCATTGATGGAGTATAATCATATGAGCTTTGGTGGCCCGCCGGTTACTGTGGAAACAGCTGAAGAAGCAGATGAGCTTTTAC
GTAAGGAAGAAAAGGATTCTGCAATTGAGGCGGAAATCCTTTCGGCCCCACCAAAGATGGTCTACAACAAACTCATGTTAAGGTTCACACGAAAACTTTTGGTTGCAGTT
GGGGAGAGATGGGACAGTCACGTGCTTAAAATTGAAAAAGTCATTCCTCCAACTTGGAAGGACAAGCCTGCTGGACGGATTCTGGAACTTTGTATTCTTCACCTGGCTAT
GTCTGAAATTACGGTCCTGGGAACAAAGCATCCAATTGTGATTAACGAGGCTGTTGATCTTGCAAAGCGATTCTGCGACGGAGCAGCACCTCGAATTATTAATGGGTGCC
TTAGGACCTTTGTGAAGGACGTCCAAGAAATTGATTCAACTCGTGCTCGAGAGAAGCTAGTAGCCAGTGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCATATTTTCAAAGTTTAAGTCTTTAATCACTCCACCACTCCACCACCCTTTAGGAACCATATTTAATGAATTTATTAATACTCAAAATTTCAATTATATTTATCA
GCAGCCTAATTTTCATTTCACTTGCCACATTTCTGGAATATGCCGGTTCCCATTCCCCACTAAATCAATCTTTCCTTATGTTAAAGATTCTGTGCCACATTTCTTCTCTC
AACCCTCACTTCGAACATCTACTTCTTTCTCCGAAAATTCCGTGGCTAAGGAGCGGGATTCTGTTGTTTCTTCCATAGAAACGATTCCGAAGGTCGACAAGAGCGGGAGA
TTATGTAGCCTCAGAGCTGCTAGAGAGCTTGCTTTGTCAATTGTTTATGCAGCTTGTTTAGAAGGCTTCGATCCAGTTCGACTCTTCGAGAAGCGGTTGAATGCTCGTCG
AGAACCGGGATACAAATTTGATGAGACATCATTGATGGAGTATAATCATATGAGCTTTGGTGGCCCGCCGGTTACTGTGGAAACAGCTGAAGAAGCAGATGAGCTTTTAC
GTAAGGAAGAAAAGGATTCTGCAATTGAGGCGGAAATCCTTTCGGCCCCACCAAAGATGGTCTACAACAAACTCATGTTAAGGTTCACACGAAAACTTTTGGTTGCAGTT
GGGGAGAGATGGGACAGTCACGTGCTTAAAATTGAAAAAGTCATTCCTCCAACTTGGAAGGACAAGCCTGCTGGACGGATTCTGGAACTTTGTATTCTTCACCTGGCTAT
GTCTGAAATTACGGTCCTGGGAACAAAGCATCCAATTGTGATTAACGAGGCTGTTGATCTTGCAAAGCGATTCTGCGACGGAGCAGCACCTCGAATTATTAATGGGTGCC
TTAGGACCTTTGTGAAGGACGTCCAAGAAATTGATTCAACTCGTGCTCGAGAGAAGCTAGTAGCCAGTGTATGA
Protein sequenceShow/hide protein sequence
MSIFSKFKSLITPPLHHPLGTIFNEFINTQNFNYIYQQPNFHFTCHISGICRFPFPTKSIFPYVKDSVPHFFSQPSLRTSTSFSENSVAKERDSVVSSIETIPKVDKSGR
LCSLRAARELALSIVYAACLEGFDPVRLFEKRLNARREPGYKFDETSLMEYNHMSFGGPPVTVETAEEADELLRKEEKDSAIEAEILSAPPKMVYNKLMLRFTRKLLVAV
GERWDSHVLKIEKVIPPTWKDKPAGRILELCILHLAMSEITVLGTKHPIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDVQEIDSTRAREKLVASV