; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0023203 (gene) of Chayote v1 genome

Gene IDSed0023203
OrganismSechium edule (Chayote v1)
Descriptionpolyadenylate-binding protein-interacting protein 5-like
Genome locationLG05:30561588..30565733
RNA-Seq ExpressionSed0023203
SyntenySed0023203
Gene Ontology termsNA
InterPro domainsIPR038981 - Polyadenylate-binding protein-interacting protein 5/6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024479.1 Polyadenylate-binding protein-interacting protein 5 [Cucurbita argyrosperma subsp. argyrosperma]7.1e-0752.38Show/hide
Query:  VEEMHANFSKLSEEFLTEVYLENKADLTAAIDTLKQLE---------DYEGLPDSLGIGDTSEPGSAAAGRPSSK-KNVAKGSS
        +E +   F  LSE+ LT+VY  N ADL AA+D L QLE         D E LPDSL IGD SE G AAA + SS+ KNVA G+S
Subjt:  VEEMHANFSKLSEEFLTEVYLENKADLTAAIDTLKQLE---------DYEGLPDSLGIGDTSEPGSAAAGRPSSK-KNVAKGSS

KAG7031819.1 Polyadenylate-binding protein-interacting protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-0748.24Show/hide
Query:  VEEMHANFSKLSEEFLTEVYLENKADLTAAIDTLKQLE-----DYE----GLPDSLGIGDTSEPGSAAAGRPSSKKNVAKGSSGT
        +E +H +F  LS++ +TEVY  NK DL AAID L QLE     D+E     LPDSL IGD SE G A   +PS +   A G  GT
Subjt:  VEEMHANFSKLSEEFLTEVYLENKADLTAAIDTLKQLE-----DYE----GLPDSLGIGDTSEPGSAAAGRPSSKKNVAKGSSGT

XP_022941292.1 polyadenylate-binding protein-interacting protein 6-like [Cucurbita moschata]3.2e-0748.24Show/hide
Query:  VEEMHANFSKLSEEFLTEVYLENKADLTAAIDTLKQLE-----DYE----GLPDSLGIGDTSEPGSAAAGRPSSKKNVAKGSSGT
        +E +H +F  LS++ +TEVY  NK DL AAID L QLE     D+E     LPDSL IGD SE G A   +PS +   A G  GT
Subjt:  VEEMHANFSKLSEEFLTEVYLENKADLTAAIDTLKQLE-----DYE----GLPDSLGIGDTSEPGSAAAGRPSSKKNVAKGSSGT

XP_023524390.1 polyadenylate-binding protein-interacting protein 6-like [Cucurbita pepo subsp. pepo]3.2e-0748.24Show/hide
Query:  VEEMHANFSKLSEEFLTEVYLENKADLTAAIDTLKQLE-----DYE----GLPDSLGIGDTSEPGSAAAGRPSSKKNVAKGSSGT
        +E +H +F  LS++ +TEVY  NK DL AAID L QLE     D+E     LPDSL IGD SE G A   +PS +   A G  GT
Subjt:  VEEMHANFSKLSEEFLTEVYLENKADLTAAIDTLKQLE-----DYE----GLPDSLGIGDTSEPGSAAAGRPSSKKNVAKGSSGT

XP_023536366.1 polyadenylate-binding protein-interacting protein 5-like [Cucurbita pepo subsp. pepo]5.4e-0752.38Show/hide
Query:  VEEMHANFSKLSEEFLTEVYLENKADLTAAIDTLKQLEDY---------EGLPDSLGIGDTSEPGSAAAGRPSSK-KNVAKGSS
        +E +   F  LSE+ LT+VY  N ADL AA+D L QLED          E LPDSL IGD SE G AAA + SS+ KNVA G+S
Subjt:  VEEMHANFSKLSEEFLTEVYLENKADLTAAIDTLKQLEDY---------EGLPDSLGIGDTSEPGSAAAGRPSSK-KNVAKGSS

TrEMBL top hitse value%identityAlignment
A0A6J1CJ15 polyadenylate-binding protein-interacting protein 5-like1.0e-0648.84Show/hide
Query:  VEEMHANFSKLSEEFLTEVYLENKADLTAAIDTLKQL--------EDY--EGLPDSLGIGDTSEPGSAAAGRPSSKKNVAKGSSGT
        +E + A+F  LS++ LT+VYL NK D+ AAID L  L        EDY  EGLPDSL IGD SE G AA  +PS K     G++ T
Subjt:  VEEMHANFSKLSEEFLTEVYLENKADLTAAIDTLKQL--------EDY--EGLPDSLGIGDTSEPGSAAAGRPSSKKNVAKGSSGT

A0A6J1F6U2 polyadenylate-binding protein-interacting protein 5-like3.4e-0752.38Show/hide
Query:  VEEMHANFSKLSEEFLTEVYLENKADLTAAIDTLKQLE---------DYEGLPDSLGIGDTSEPGSAAAGRPSSK-KNVAKGSS
        +E +   F  LSE+ LT+VY  N ADL AA+D L QLE         D E LPDSL IGD SE G AAA + SS+ KNVA G+S
Subjt:  VEEMHANFSKLSEEFLTEVYLENKADLTAAIDTLKQLE---------DYEGLPDSLGIGDTSEPGSAAAGRPSSK-KNVAKGSS

A0A6J1FM20 polyadenylate-binding protein-interacting protein 6-like1.5e-0748.24Show/hide
Query:  VEEMHANFSKLSEEFLTEVYLENKADLTAAIDTLKQLE-----DYE----GLPDSLGIGDTSEPGSAAAGRPSSKKNVAKGSSGT
        +E +H +F  LS++ +TEVY  NK DL AAID L QLE     D+E     LPDSL IGD SE G A   +PS +   A G  GT
Subjt:  VEEMHANFSKLSEEFLTEVYLENKADLTAAIDTLKQLE-----DYE----GLPDSLGIGDTSEPGSAAAGRPSSKKNVAKGSSGT

A0A6J1IIU2 polyadenylate-binding protein-interacting protein 5-like2.9e-0651.19Show/hide
Query:  VEEMHANFSKLSEEFLTEVYLENKADLTAAIDTLKQLEDY---------EGLPDSLGIGDTSEPGSAAAGRPSSK-KNVAKGSS
        +E +   F  LSE+ L  VY  N ADL AA+D L QLED          E LPDSL IGD SE G AAA + SS+ KNVA G+S
Subjt:  VEEMHANFSKLSEEFLTEVYLENKADLTAAIDTLKQLEDY---------EGLPDSLGIGDTSEPGSAAAGRPSSK-KNVAKGSS

A0A6J1IVG0 polyadenylate-binding protein-interacting protein 6-like4.5e-0747.06Show/hide
Query:  VEEMHANFSKLSEEFLTEVYLENKADLTAAIDTLKQLE-----DYE----GLPDSLGIGDTSEPGSAAAGRPSSKKNVAKGSSGT
        +E +H +F  LS++ +TEVY  NK DL AAID L QLE     D+E     LPDSL IGD SE G A   +PS +     G  GT
Subjt:  VEEMHANFSKLSEEFLTEVYLENKADLTAAIDTLKQLE-----DYE----GLPDSLGIGDTSEPGSAAAGRPSSKKNVAKGSSGT

SwissProt top hitse value%identityAlignment
Q6NQH9 Polyadenylate-binding protein-interacting protein 64.5e-0445.76Show/hide
Query:  VEEMHANFSKLSEEFLTEVYLENKADLTAAIDTLKQLEDY-----EGLPDSLGIGDTSE
        +E + A +  LS+E + +VYL N  DL A I+ L QLE Y     E LPD+L IGD  E
Subjt:  VEEMHANFSKLSEEFLTEVYLENKADLTAAIDTLKQLEDY-----EGLPDSLGIGDTSE

Q9LYE5 Polyadenylate-binding protein-interacting protein 54.8e-0643.04Show/hide
Query:  VEEMHANFSKLSEEFLTEVYLENKADLTAAIDTLKQLEDY-----EGLPDSLGIGDTSEPGSAAAGRPSSKKNVAKGSS
        +E +   FS LS+E +T+VYL N  DL A I+ L QLE Y     E LP++L IGD SE G      PS+ K+    +S
Subjt:  VEEMHANFSKLSEEFLTEVYLENKADLTAAIDTLKQLEDY-----EGLPDSLGIGDTSEPGSAAAGRPSSKKNVAKGSS

Arabidopsis top hitse value%identityAlignment
AT5G11440.1 CTC-interacting domain 53.4e-0743.04Show/hide
Query:  VEEMHANFSKLSEEFLTEVYLENKADLTAAIDTLKQLEDY-----EGLPDSLGIGDTSEPGSAAAGRPSSKKNVAKGSS
        +E +   FS LS+E +T+VYL N  DL A I+ L QLE Y     E LP++L IGD SE G      PS+ K+    +S
Subjt:  VEEMHANFSKLSEEFLTEVYLENKADLTAAIDTLKQLEDY-----EGLPDSLGIGDTSEPGSAAAGRPSSKKNVAKGSS

AT5G25540.1 CTC-interacting domain 63.2e-0545.76Show/hide
Query:  VEEMHANFSKLSEEFLTEVYLENKADLTAAIDTLKQLEDY-----EGLPDSLGIGDTSE
        +E + A +  LS+E + +VYL N  DL A I+ L QLE Y     E LPD+L IGD  E
Subjt:  VEEMHANFSKLSEEFLTEVYLENKADLTAAIDTLKQLEDY-----EGLPDSLGIGDTSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGAAGAGATGCATGCCAATTTCTCTAAACTATCAGAGGAATTCCTTACTGAAGTCTATTTGGAGAATAAAGCCGACTTGACTGCTGCGATAGATACGTTGAAACA
GCTCGAGGACTACGAAGGTCTCCCGGACAGTTTGGGCATTGGTGATACATCAGAACCCGGGTCTGCAGCTGCTGGTCGACCATCTTCGAAAAAGAATGTAGCCAAAGGTT
CAAGTGGTACCTGGTGTCTGTTGGTTTTGAGAAATGAGCTTTTCTTTCCCATCCTTGTTTTGGTGTCTGTCCATTTCTCTGGTTATACGATTGTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCGAAGAGATGCATGCCAATTTCTCTAAACTATCAGAGGAATTCCTTACTGAAGTCTATTTGGAGAATAAAGCCGACTTGACTGCTGCGATAGATACGTTGAAACA
GCTCGAGGACTACGAAGGTCTCCCGGACAGTTTGGGCATTGGTGATACATCAGAACCCGGGTCTGCAGCTGCTGGTCGACCATCTTCGAAAAAGAATGTAGCCAAAGGTT
CAAGTGGTACCTGGTGTCTGTTGGTTTTGAGAAATGAGCTTTTCTTTCCCATCCTTGTTTTGGTGTCTGTCCATTTCTCTGGTTATACGATTGTATAG
Protein sequenceShow/hide protein sequence
MVEEMHANFSKLSEEFLTEVYLENKADLTAAIDTLKQLEDYEGLPDSLGIGDTSEPGSAAAGRPSSKKNVAKGSSGTWCLLVLRNELFFPILVLVSVHFSGYTIV