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Sed0023221 (gene) of Chayote v1 genome

Gene IDSed0023221
OrganismSechium edule (Chayote v1)
DescriptionEthylene-responsive transcription factor
Genome locationLG02:50207612..50208031
RNA-Seq ExpressionSed0023221
SyntenySed0023221
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009873 - ethylene-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily
IPR044808 - Ethylene-responsive transcription factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049259.1 ethylene-responsive transcription factor ERF096 [Cucumis melo var. makuwa]2.3e-5383.57Show/hide
Query:  MDESGHGRGSGYGEDLAAAGGGREIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTNSGSG---IG
        MDESG GRG G+G+DL  AGG REIRYRGVR+RPWGKFAAEIRDSRRQGVR+WLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLT+SG G     
Subjt:  MDESGHGRGSGYGEDLAAAGGGREIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTNSGSG---IG

Query:  VGSGSSSSMSMPQNEVIEFEYLDDKVLEDLLDYGEEETEK
         GS SSSSMSM QNEVIEFEYLDDKVLEDLLDYGEE  ++
Subjt:  VGSGSSSSMSMPQNEVIEFEYLDDKVLEDLLDYGEEETEK

KAG6582379.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia]1.8e-5383.33Show/hide
Query:  MDESGHGRGSGYGEDLAAAGGGREIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTNSGSGIGVGS
        MDESG GRG GYGED + AGG REIRYRGVR+RPWGKFAAEIRDSRRQG+R+WLGTFNTAEEAARAYDRAAY+MRGHLAILNFPNEYPLT++G+G GV S
Subjt:  MDESGHGRGSGYGEDLAAAGGGREIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTNSGSGIGVGS

Query:  GS-SSSMSMPQNEVIEFEYLDDKVLEDLLDYGEEETEK
         S SSSMSM  NEVIEFEYLDDKVLEDLLD GEE  +K
Subjt:  GS-SSSMSMPQNEVIEFEYLDDKVLEDLLDYGEEETEK

XP_022924727.1 ethylene-responsive transcription factor ERF096-like [Cucurbita moschata]1.8e-5383.33Show/hide
Query:  MDESGHGRGSGYGEDLAAAGGGREIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTNSGSGIGVGS
        MDESG GRG GY EDL+ AGG REIRYRGVR+RPWGKFAAEIRDSRRQG+R+WLGTFNTAEEAARAYDRAAY+MRGHLAILNFPNEYPLT++G+G GV S
Subjt:  MDESGHGRGSGYGEDLAAAGGGREIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTNSGSGIGVGS

Query:  GS-SSSMSMPQNEVIEFEYLDDKVLEDLLDYGEEETEK
         S SSSMSM  NEVIEFEYLDDKVLEDLLD GEE  +K
Subjt:  GS-SSSMSMPQNEVIEFEYLDDKVLEDLLDYGEEETEK

XP_022980085.1 ethylene-responsive transcription factor ERF096 [Cucurbita maxima]6.7e-5382.61Show/hide
Query:  MDESGHGRGSGYGEDLAAAGGGREIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTNSGSGIGV-G
        MDESG GRG GY ED + AGG REIRYRGVR+RPWGKFAAEIRDSRRQG+R+WLGTFNTAEEAARAYDRAAY+MRGHLAILNFPNEYPLT+ G+G GV  
Subjt:  MDESGHGRGSGYGEDLAAAGGGREIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTNSGSGIGV-G

Query:  SGSSSSMSMPQNEVIEFEYLDDKVLEDLLDYGEEETEK
        SG SSSMSM  NEVIEFEYLDDKVLEDLLD GEE  +K
Subjt:  SGSSSSMSMPQNEVIEFEYLDDKVLEDLLDYGEEETEK

XP_038877364.1 ethylene-responsive transcription factor ERF096 [Benincasa hispida]2.7e-5482.52Show/hide
Query:  MDESGHGRGSGYGEDLAAAGGGREIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTNSGSGIGVG-
        MDESG GRG GY ED   AGG REIRYRGVR+RPWGKFAAEIRDSRRQGVR+WLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLT+SG G G G 
Subjt:  MDESGHGRGSGYGEDLAAAGGGREIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTNSGSGIGVG-

Query:  -----SGSSSSMSMPQNEVIEFEYLDDKVLEDLLDYGEEETEK
             S SSSSMSM QNEVIEFEYLDDKVLEDLLDYGEE  ++
Subjt:  -----SGSSSSMSMPQNEVIEFEYLDDKVLEDLLDYGEEETEK

TrEMBL top hitse value%identityAlignment
A0A0A0L9V5 AP2/ERF domain-containing protein2.3e-5182.48Show/hide
Query:  MDESGHGRGSGYGEDLAAAGGGREIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTNSGSGIGVGS
        MDESG GRG GYG+D   + G REIRYRGVR+RPWGKFAAEIRDSRRQGVR+WLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLT  G+    GS
Subjt:  MDESGHGRGSGYGEDLAAAGGGREIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTNSGSGIGVGS

Query:  GSSSSMSMPQNEVIEFEYLDDKVLEDLLDYGEEETEK
         SSSSMSM QNEVIEFEYLDDKVLEDLLDYGEE  ++
Subjt:  GSSSSMSMPQNEVIEFEYLDDKVLEDLLDYGEEETEK

A0A1S3AW98 ethylene-responsive transcription factor ERF0969.4e-5382.86Show/hide
Query:  MDESGHGRGSGYGEDLAAAGGGREIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTNSGSG---IG
        MDESG GRG G+G+DL  AGG REI YRGVR+RPWGKFAAEIRDSRRQGVR+WLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLT+SG G     
Subjt:  MDESGHGRGSGYGEDLAAAGGGREIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTNSGSG---IG

Query:  VGSGSSSSMSMPQNEVIEFEYLDDKVLEDLLDYGEEETEK
         GS SSSSMSM QNEVIEFEYLDDKVLEDLLDYGEE  ++
Subjt:  VGSGSSSSMSMPQNEVIEFEYLDDKVLEDLLDYGEEETEK

A0A5A7U6W8 Ethylene-responsive transcription factor ERF0961.1e-5383.57Show/hide
Query:  MDESGHGRGSGYGEDLAAAGGGREIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTNSGSG---IG
        MDESG GRG G+G+DL  AGG REIRYRGVR+RPWGKFAAEIRDSRRQGVR+WLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLT+SG G     
Subjt:  MDESGHGRGSGYGEDLAAAGGGREIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTNSGSG---IG

Query:  VGSGSSSSMSMPQNEVIEFEYLDDKVLEDLLDYGEEETEK
         GS SSSSMSM QNEVIEFEYLDDKVLEDLLDYGEE  ++
Subjt:  VGSGSSSSMSMPQNEVIEFEYLDDKVLEDLLDYGEEETEK

A0A6J1E9T0 ethylene-responsive transcription factor ERF096-like8.5e-5483.33Show/hide
Query:  MDESGHGRGSGYGEDLAAAGGGREIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTNSGSGIGVGS
        MDESG GRG GY EDL+ AGG REIRYRGVR+RPWGKFAAEIRDSRRQG+R+WLGTFNTAEEAARAYDRAAY+MRGHLAILNFPNEYPLT++G+G GV S
Subjt:  MDESGHGRGSGYGEDLAAAGGGREIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTNSGSGIGVGS

Query:  GS-SSSMSMPQNEVIEFEYLDDKVLEDLLDYGEEETEK
         S SSSMSM  NEVIEFEYLDDKVLEDLLD GEE  +K
Subjt:  GS-SSSMSMPQNEVIEFEYLDDKVLEDLLDYGEEETEK

A0A6J1IV86 ethylene-responsive transcription factor ERF0963.2e-5382.61Show/hide
Query:  MDESGHGRGSGYGEDLAAAGGGREIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTNSGSGIGV-G
        MDESG GRG GY ED + AGG REIRYRGVR+RPWGKFAAEIRDSRRQG+R+WLGTFNTAEEAARAYDRAAY+MRGHLAILNFPNEYPLT+ G+G GV  
Subjt:  MDESGHGRGSGYGEDLAAAGGGREIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTNSGSGIGV-G

Query:  SGSSSSMSMPQNEVIEFEYLDDKVLEDLLDYGEEETEK
        SG SSSMSM  NEVIEFEYLDDKVLEDLLD GEE  +K
Subjt:  SGSSSSMSMPQNEVIEFEYLDDKVLEDLLDYGEEETEK

SwissProt top hitse value%identityAlignment
P93822 Ethylene-responsive transcription factor 145.5e-3459.85Show/hide
Query:  MDESGHGRGSGYGEDLAAAGGGREIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTNSGSGIGVGS
        MD+ G   GSG        GG  + +YRGVR+RPWGK+AAEIRDSR+ G R+WLGTF+TAE+AARAYDRAAY+MRG  AILNFP+EY   N G+G    +
Subjt:  MDESGHGRGSGYGEDLAAAGGGREIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTNSGSGIGVGS

Query:  GSSSSMSMPQNEVIEFEYLDDKVLEDLLDYGE
         +SSS S    +V EFEYLDD VL++LL+YGE
Subjt:  GSSSSMSMPQNEVIEFEYLDDKVLEDLLDYGE

Q9LND1 Ethylene-responsive transcription factor ERF0941.2e-2065.28Show/hide
Query:  GEDLAAAGGGREIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFP
        G++   A    E  YRGVRKRPWGKFAAEIRDS R+G+R+WLGTF+TAE AA AYD+AA+ ++G LA+LNFP
Subjt:  GEDLAAAGGGREIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFP

Q9LSX0 Ethylene-responsive transcription factor ERF0961.4e-3254.86Show/hide
Query:  MDESGHGRGSGYGEDLAAAGGGREIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTNSGSGIGV--
        MD+ G G G+ +G            +YRGVR+RPWGK+AAEIRDSR+ G R+WLGTF+TAEEAARAYD+AAY+MRG  AILNFP+EY   N GSG+    
Subjt:  MDESGHGRGSGYGEDLAAAGGGREIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTNSGSGIGV--

Query:  ----GSGSSSSMSMPQNEVIEFEYLDDKVLEDLLDYGEEETEKK
             S +S+S S    +V EFEYLDD VLE+LL+ GE+  + K
Subjt:  ----GSGSSSSMSMPQNEVIEFEYLDDKVLEDLLDYGEEETEKK

Q9LTC5 Ethylene-responsive transcription factor ERF0981.4e-3462.6Show/hide
Query:  REIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEY-----------PLTNSGSGIGVGSGSSSSMSMPQN
        ++ R+RGVR+RPWGKFAAEIRD  R G RLWLGTF TAEEAARAYDRAA+N+RGHLAILNFPNEY           P  +S S    GS S++     Q 
Subjt:  REIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEY-----------PLTNSGSGIGVGSGSSSSMSMPQN

Query:  EVIEFEYLDDKVLEDLLDYGEEE
        EV EFEYLDDKVLE+LLD  E +
Subjt:  EVIEFEYLDDKVLEDLLDYGEEE

Q9LTC6 Ethylene-responsive transcription factor ERF0951.8e-3261.16Show/hide
Query:  EIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTNSG-SGIGVGSGSSSSMSM-------PQNEVIE
        E++YRGVRKRPWGK+AAEIRDS R G R+WLGTFNTAE+AARAYDRAA+ MRG  AILNFP+EY +   G +G    + +SSS             EVIE
Subjt:  EIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTNSG-SGIGVGSGSSSSMSM-------PQNEVIE

Query:  FEYLDDKVLEDLLDYGEEETE
        FEYLDD +LE+LLDYGE   +
Subjt:  FEYLDDKVLEDLLDYGEEETE

Arabidopsis top hitse value%identityAlignment
AT1G04370.1 Ethylene-responsive element binding factor 143.9e-3559.85Show/hide
Query:  MDESGHGRGSGYGEDLAAAGGGREIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTNSGSGIGVGS
        MD+ G   GSG        GG  + +YRGVR+RPWGK+AAEIRDSR+ G R+WLGTF+TAE+AARAYDRAAY+MRG  AILNFP+EY   N G+G    +
Subjt:  MDESGHGRGSGYGEDLAAAGGGREIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTNSGSGIGVGS

Query:  GSSSSMSMPQNEVIEFEYLDDKVLEDLLDYGE
         +SSS S    +V EFEYLDD VL++LL+YGE
Subjt:  GSSSSMSMPQNEVIEFEYLDDKVLEDLLDYGE

AT1G06160.1 octadecanoid-responsive Arabidopsis AP2/ERF 598.5e-2265.28Show/hide
Query:  GEDLAAAGGGREIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFP
        G++   A    E  YRGVRKRPWGKFAAEIRDS R+G+R+WLGTF+TAE AA AYD+AA+ ++G LA+LNFP
Subjt:  GEDLAAAGGGREIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFP

AT3G23220.1 Integrase-type DNA-binding superfamily protein1.3e-3361.16Show/hide
Query:  EIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTNSG-SGIGVGSGSSSSMSM-------PQNEVIE
        E++YRGVRKRPWGK+AAEIRDS R G R+WLGTFNTAE+AARAYDRAA+ MRG  AILNFP+EY +   G +G    + +SSS             EVIE
Subjt:  EIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTNSG-SGIGVGSGSSSSMSM-------PQNEVIE

Query:  FEYLDDKVLEDLLDYGEEETE
        FEYLDD +LE+LLDYGE   +
Subjt:  FEYLDDKVLEDLLDYGEEETE

AT3G23230.1 Integrase-type DNA-binding superfamily protein1.0e-3562.6Show/hide
Query:  REIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEY-----------PLTNSGSGIGVGSGSSSSMSMPQN
        ++ R+RGVR+RPWGKFAAEIRD  R G RLWLGTF TAEEAARAYDRAA+N+RGHLAILNFPNEY           P  +S S    GS S++     Q 
Subjt:  REIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEY-----------PLTNSGSGIGVGSGSSSSMSMPQN

Query:  EVIEFEYLDDKVLEDLLDYGEEE
        EV EFEYLDDKVLE+LLD  E +
Subjt:  EVIEFEYLDDKVLEDLLDYGEEE

AT5G43410.1 Integrase-type DNA-binding superfamily protein9.6e-3454.86Show/hide
Query:  MDESGHGRGSGYGEDLAAAGGGREIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTNSGSGIGV--
        MD+ G G G+ +G            +YRGVR+RPWGK+AAEIRDSR+ G R+WLGTF+TAEEAARAYD+AAY+MRG  AILNFP+EY   N GSG+    
Subjt:  MDESGHGRGSGYGEDLAAAGGGREIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTNSGSGIGV--

Query:  ----GSGSSSSMSMPQNEVIEFEYLDDKVLEDLLDYGEEETEKK
             S +S+S S    +V EFEYLDD VLE+LL+ GE+  + K
Subjt:  ----GSGSSSSMSMPQNEVIEFEYLDDKVLEDLLDYGEEETEKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGAGAGTGGTCATGGCCGTGGAAGTGGTTACGGGGAGGATTTGGCGGCGGCCGGTGGCGGAAGAGAGATCCGTTACCGGGGAGTACGGAAGCGGCCGTGGGGAAA
ATTCGCGGCGGAGATACGAGACTCTAGAAGGCAAGGAGTGCGCTTGTGGCTCGGAACATTCAACACGGCGGAAGAAGCCGCACGTGCTTACGATCGAGCAGCTTACAACA
TGAGGGGTCATTTGGCAATTTTAAACTTCCCCAATGAATACCCCCTAACCAACTCGGGTAGCGGCATCGGCGTCGGCAGTGGCTCTTCTTCTTCAATGTCAATGCCCCAA
AATGAAGTGATTGAATTTGAGTATTTAGATGATAAAGTGCTGGAAGATCTACTTGACTATGGAGAAGAAGAAACAGAAAAGAAGAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACGAGAGTGGTCATGGCCGTGGAAGTGGTTACGGGGAGGATTTGGCGGCGGCCGGTGGCGGAAGAGAGATCCGTTACCGGGGAGTACGGAAGCGGCCGTGGGGAAA
ATTCGCGGCGGAGATACGAGACTCTAGAAGGCAAGGAGTGCGCTTGTGGCTCGGAACATTCAACACGGCGGAAGAAGCCGCACGTGCTTACGATCGAGCAGCTTACAACA
TGAGGGGTCATTTGGCAATTTTAAACTTCCCCAATGAATACCCCCTAACCAACTCGGGTAGCGGCATCGGCGTCGGCAGTGGCTCTTCTTCTTCAATGTCAATGCCCCAA
AATGAAGTGATTGAATTTGAGTATTTAGATGATAAAGTGCTGGAAGATCTACTTGACTATGGAGAAGAAGAAACAGAAAAGAAGAGCTAA
Protein sequenceShow/hide protein sequence
MDESGHGRGSGYGEDLAAAGGGREIRYRGVRKRPWGKFAAEIRDSRRQGVRLWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTNSGSGIGVGSGSSSSMSMPQ
NEVIEFEYLDDKVLEDLLDYGEEETEKKS