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Sed0023232 (gene) of Chayote v1 genome

Gene IDSed0023232
OrganismSechium edule (Chayote v1)
Descriptionskin secretory protein xP2
Genome locationLG03:630041..630986
RNA-Seq ExpressionSed0023232
SyntenySed0023232
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008458926.1 PREDICTED: skin secretory protein xP2 [Cucumis melo]2.9e-2057.89Show/hide
Query:  MARQLVVLALLF-AAVVGIVSAAEAPSA----SPASSPEPADTKPAGD-KSPAAAPSKSDAAAPTA----------APKASASSPRAAATAPEAES----
        MARQ ++LALLF AAV+GIVSAAEAP+A    SPASSP+ AD +P+ D K+PAAAPSK+ AAA  A          APK +AS+P A   APEA+S    
Subjt:  MARQLVVLALLF-AAVVGIVSAAEAPSA----SPASSPEPADTKPAGD-KSPAAAPSKSDAAAPTA----------APKASASSPRAAATAPEAES----

Query:  -PATSPAGDES---------PVSSPASDADVSSPPSPTGPASGPASDGGA-AAADAPAPDSETPASGASFSKVS--AVAGVCAVAGFFAF
         PA+SPAGDES         P  +PASDA+VSSPPSPTGPA+GPASD  A A AD+PA DS  P SG S  KVS  AVAG+  V G F F
Subjt:  -PATSPAGDES---------PVSSPASDADVSSPPSPTGPASGPASDGGA-AAADAPAPDSETPASGASFSKVS--AVAGVCAVAGFFAF

XP_022133599.1 brain acid soluble protein 1 [Momordica charantia]7.4e-1650.51Show/hide
Query:  MARQLVVLALLFAAVVGIVSAAEAPSASPASSPEPADTKPAGD--------KSPAAAPSKSD-----AAAPTAAPKA---SASSPRAAATAPEAESP---
        MARQLVVLALLFAAVVG+VSAA+APS +PA++P  +++  A D         +PAAAPSKS+     AAA + AP +   +A +P+ AA++P A++P   
Subjt:  MARQLVVLALLFAAVVGIVSAAEAPSASPASSPEPADTKPAGD--------KSPAAAPSKSD-----AAAPTAAPKA---SASSPRAAATAPEAESP---

Query:  ---------------ATSPAGDESPVSSPASDADVSSPPSPTGPAS---GPASDGGAAAADAPAPDSET--PASGASFSKVS--AVAGVCAVAGFFAF
                       A  PA DESP +SP + ADVSSPPSP+GPA+      +D  A AA  PA D+ T  PASGASF K S  A+AGVCAVAGFFAF
Subjt:  ---------------ATSPAGDESPVSSPASDADVSSPPSPTGPAS---GPASDGGAAAADAPAPDSET--PASGASFSKVS--AVAGVCAVAGFFAF

XP_024031308.1 classical arabinogalactan protein 11-like [Morus notabilis]2.7e-1051.19Show/hide
Query:  MARQLVVLALLFAAVVGIVSAAEAPSASPASSPEPADTKPAGDKSPAAAP-SKSDAAAPTAAPKASASSPRAAATAPEAE-SPATSPAGDESPVSSPASD
        MARQ+VVLAL+F A+ G+VSA EAP+ SP +SP P  + P    SP A P S S+A APT++PKA A +P ++A+ P A  SP +S A   +P SSP  D
Subjt:  MARQLVVLALLFAAVVGIVSAAEAPSASPASSPEPADTKPAGDKSPAAAP-SKSDAAAPTAAPKASASSPRAAATAPEAE-SPATSPAGDESPVSSPASD

Query:  ADVSSPPSP------TGPASGPASDGGAAAADAPAPDSET-PASGASFSKVS--AVAGVCAVAGFFAF
         DVSSPP+P        PA GP SD    A+D PA   +T P SGAS   VS  A AG  AVAG FAF
Subjt:  ADVSSPPSP------TGPASGPASDGGAAAADAPAPDSET-PASGASFSKVS--AVAGVCAVAGFFAF

XP_031741751.1 lysine-rich arabinogalactan protein 17 [Cucumis sativus]6.7e-1753.89Show/hide
Query:  MARQLVVLALLF-AAVVGIVSAAEA--------PSASPASSPEPADTKPA-GDKSPAAAPSKSDAAAPTA----------APKASASSPRAAATAPEAES
        MARQ  +LALLF AAVVGIVSAAEA        P++SPASSP+ AD +P+ G K+PAAAPSKS AAA  A          APK +AS+P A A APEA++
Subjt:  MARQLVVLALLF-AAVVGIVSAAEA--------PSASPASSPEPADTKPA-GDKSPAAAPSKSDAAAPTA----------APKASASSPRAAATAPEAES

Query:  -----PATSPAGDESP---VSSPASDADVSSPPSPTGPASGPASDGGA-----AAADAPA-PDSETPASGASFSKVS--AVAGVCAVAGFFAF
             PA+SPAGDES      + A +ADVSSPPSPTGPA+GP SD  A     ++AD+PA   S++PA+G S  KVS  AVAG+  + G F F
Subjt:  -----PATSPAGDESP---VSSPASDADVSSPPSPTGPASGPASDGGA-----AAADAPA-PDSETPASGASFSKVS--AVAGVCAVAGFFAF

XP_038889219.1 classical arabinogalactan protein 11 [Benincasa hispida]1.7e-2562.71Show/hide
Query:  MARQLVVLALLFAAVVGIVSAAEAPSASPASSPEPADTKPA-GDKSPAAAPSKSDAAAPTA----------APKASASSPRAAATAPEAESPATSPAGDE
        MARQLV+LALLF AVVGIVSAAEAP+ASPASSP   D   +  +K+PAAAPSKS AAA TA          AP+ +ASSP+A A +P A  PA+ PAGDE
Subjt:  MARQLVVLALLFAAVVGIVSAAEAPSASPASSPEPADTKPA-GDKSPAAAPSKSDAAAPTA----------APKASASSPRAAATAPEAESPATSPAGDE

Query:  ----SPVSSPASDADVSSPPSPTGPASGPA---SDGGAAAADAPAPDSETPASGASFSKVS--AVAGVCAVAGFFAF
            SP  +P SDADVSSPPSPTGPA+GPA   +  G AAADAPA      ASG SF KVS  AVAG+ AVAGFFAF
Subjt:  ----SPVSSPASDADVSSPPSPTGPASGPA---SDGGAAAADAPAPDSETPASGASFSKVS--AVAGVCAVAGFFAF

TrEMBL top hitse value%identityAlignment
A0A0A0KUB8 Uncharacterized protein4.1e-1251.53Show/hide
Query:  AEAPSASPASSPEPADTKPA-GDKSPAAAPSKSDAAAPTA----------APKASASSPRAAATAPEAES-----PATSPAGDESP---VSSPASDADVS
        A +P++SPASSP+ AD +P+ G K+PAAAPSKS AAA  A          APK +AS+P A A APEA++     PA+SPAGDES      + A +ADVS
Subjt:  AEAPSASPASSPEPADTKPA-GDKSPAAAPSKSDAAAPTA----------APKASASSPRAAATAPEAES-----PATSPAGDESP---VSSPASDADVS

Query:  SPPSPTGPASGPASDGGA-----AAADAPA-PDSETPASGASFSKVS--AVAGVCAVAGFFAF
        SPPSPTGPA+GP SD  A     ++AD+PA   S++PA+G S  KVS  AVAG+  + G F F
Subjt:  SPPSPTGPASGPASDGGA-----AAADAPA-PDSETPASGASFSKVS--AVAGVCAVAGFFAF

A0A1S3CA92 skin secretory protein xP21.4e-2057.89Show/hide
Query:  MARQLVVLALLF-AAVVGIVSAAEAPSA----SPASSPEPADTKPAGD-KSPAAAPSKSDAAAPTA----------APKASASSPRAAATAPEAES----
        MARQ ++LALLF AAV+GIVSAAEAP+A    SPASSP+ AD +P+ D K+PAAAPSK+ AAA  A          APK +AS+P A   APEA+S    
Subjt:  MARQLVVLALLF-AAVVGIVSAAEAPSA----SPASSPEPADTKPAGD-KSPAAAPSKSDAAAPTA----------APKASASSPRAAATAPEAES----

Query:  -PATSPAGDES---------PVSSPASDADVSSPPSPTGPASGPASDGGA-AAADAPAPDSETPASGASFSKVS--AVAGVCAVAGFFAF
         PA+SPAGDES         P  +PASDA+VSSPPSPTGPA+GPASD  A A AD+PA DS  P SG S  KVS  AVAG+  V G F F
Subjt:  -PATSPAGDES---------PVSSPASDADVSSPPSPTGPASGPASDGGA-AAADAPAPDSETPASGASFSKVS--AVAGVCAVAGFFAF

A0A2N9EVL9 Uncharacterized protein5.0e-1049.16Show/hide
Query:  MARQLVVLALLFAAVVGIVSAAEAPSASPASSPEP--ADTKPAGDKSPAAAPSKSDAAAP---TAAPKASASS----------PRAAATAPEAES--PAT
        MARQLVVLAL+F AV G+V+A +AP++SP +SP P  + T P+     +A+  KS A+AP    +APKAS+SS          P+A+A++P + S  PA 
Subjt:  MARQLVVLALLFAAVVGIVSAAEAPSASPASSPEP--ADTKPAGDKSPAAAPSKSDAAAP---TAAPKASASS----------PRAAATAPEAES--PAT

Query:  SPAGDESPVSS-PAS--DADVSSPPSP---TGPASGPASDGGAAAADAPAPDSETPASGASFSKVSAVAGVCAVAGFFA
        SPA D+S  SS PAS  D++VSSPP+P     PA GPA   G  A D PAP      SGA+  KVSAVAG   +AGFFA
Subjt:  SPAGDESPVSS-PAS--DADVSSPPSP---TGPASGPASDGGAAAADAPAPDSETPASGASFSKVSAVAGVCAVAGFFA

A0A5D3CDS4 Skin secretory protein xP22.2e-1054.61Show/hide
Query:  EPADTKPAGD-KSPAAAPSKSDAAA--------PTA--APKASASSPRAAATAPEAES-----PATSPAGDES---------PVSSPASDADVSSPPSPT
        + AD +P+ D K+PAAAPSK+ AAA        P+A  APK +AS+P A   APEA+S     PA+SPAGDES         P  +PASDA+VSSPPSPT
Subjt:  EPADTKPAGD-KSPAAAPSKSDAAA--------PTA--APKASASSPRAAATAPEAES-----PATSPAGDES---------PVSSPASDADVSSPPSPT

Query:  GPASGPASDGGA-AAADAPAPDSETPASGASFSKVS--AVAGVCAVAGFFAF
        GPA+GPASD  A A AD+PA DS  P SG S  KVS  AVAG+  V G F F
Subjt:  GPASGPASDGGA-AAADAPAPDSETPASGASFSKVS--AVAGVCAVAGFFAF

A0A6J1BWF7 brain acid soluble protein 13.6e-1650.51Show/hide
Query:  MARQLVVLALLFAAVVGIVSAAEAPSASPASSPEPADTKPAGD--------KSPAAAPSKSD-----AAAPTAAPKA---SASSPRAAATAPEAESP---
        MARQLVVLALLFAAVVG+VSAA+APS +PA++P  +++  A D         +PAAAPSKS+     AAA + AP +   +A +P+ AA++P A++P   
Subjt:  MARQLVVLALLFAAVVGIVSAAEAPSASPASSPEPADTKPAGD--------KSPAAAPSKSD-----AAAPTAAPKA---SASSPRAAATAPEAESP---

Query:  ---------------ATSPAGDESPVSSPASDADVSSPPSPTGPAS---GPASDGGAAAADAPAPDSET--PASGASFSKVS--AVAGVCAVAGFFAF
                       A  PA DESP +SP + ADVSSPPSP+GPA+      +D  A AA  PA D+ T  PASGASF K S  A+AGVCAVAGFFAF
Subjt:  ---------------ATSPAGDESPVSSPASDADVSSPPSPTGPAS---GPASDGGAAAADAPAPDSET--PASGASFSKVS--AVAGVCAVAGFFAF

SwissProt top hitse value%identityAlignment
Q9FVE0 Classical arabinogalactan protein 113.8e-0747.77Show/hide
Query:  MARQLVVLALLFAAVVGIVSAAEAPSASPASSPEPADTKPAGDKSPAAAPSKSDAAAPTAAPKASASSPRAAATAPEAESPATSPAGDESPVSSPASDAD
        MAR  VV+ALL A  VG V AA+APSA+P +SP  + T     K+PAAAP KS AAAP       ASSP A    PE +  A SP       S  A    
Subjt:  MARQLVVLALLFAAVVGIVSAAEAPSASPASSPEPADTKPAGDKSPAAAPSKSDAAAPTAAPKASASSPRAAATAPEAESPATSPAGDESPVSSPASDAD

Query:  VSSPPSPTGPASGPASDGGAAAADAPAPDSETPASGASFSKVSAVAGVCAVAGFFAF
        VSSPP+PT  A GP+SDG   ++D PA  +E+P SGA+ +   ++AG  A AGFF F
Subjt:  VSSPPSPTGPASGPASDGGAAAADAPAPDSETPASGASFSKVSAVAGVCAVAGFFAF

Q9LY91 Classical arabinogalactan protein 68.8e-0443.56Show/hide
Query:  MARQLVVLALLFAAVVGIVSAAEAPSASPASSPEP--ADTK-PAGDKSPAAAPSKSDAAAPTAAPKASASSPRAAATAPEAESPATSPAGDESPVSSPAS
        MARQ VVL LL    +    AA+APSASP  SP P  A TK P       +AP+K+ AAAP +   +SASSP+  A++P AE P      D+   SSP+ 
Subjt:  MARQLVVLALLFAAVVGIVSAAEAPSASPASSPEP--ADTK-PAGDKSPAAAPSKSDAAAPTAAPKASASSPRAAATAPEAESPATSPAGDESPVSSPAS

Query:  DAD---VSSPPSPTGPASGPASDGGAAAADAPAPDSETPASGASFSKVSAVAGVCAVAGFFAF
         A+   VSSPP+PT P S  A+DG      +  P +E+P SGA  +   +V G  A  GFF F
Subjt:  DAD---VSSPPSPTGPASGPASDGGAAAADAPAPDSETPASGASFSKVSAVAGVCAVAGFFAF

Arabidopsis top hitse value%identityAlignment
AT3G01700.1 arabinogalactan protein 112.7e-0847.77Show/hide
Query:  MARQLVVLALLFAAVVGIVSAAEAPSASPASSPEPADTKPAGDKSPAAAPSKSDAAAPTAAPKASASSPRAAATAPEAESPATSPAGDESPVSSPASDAD
        MAR  VV+ALL A  VG V AA+APSA+P +SP  + T     K+PAAAP KS AAAP       ASSP A    PE +  A SP       S  A    
Subjt:  MARQLVVLALLFAAVVGIVSAAEAPSASPASSPEPADTKPAGDKSPAAAPSKSDAAAPTAAPKASASSPRAAATAPEAESPATSPAGDESPVSSPASDAD

Query:  VSSPPSPTGPASGPASDGGAAAADAPAPDSETPASGASFSKVSAVAGVCAVAGFFAF
        VSSPP+PT  A GP+SDG   ++D PA  +E+P SGA+ +   ++AG  A AGFF F
Subjt:  VSSPPSPTGPASGPASDGGAAAADAPAPDSETPASGASFSKVSAVAGVCAVAGFFAF

AT5G14380.1 arabinogalactan protein 66.2e-0543.56Show/hide
Query:  MARQLVVLALLFAAVVGIVSAAEAPSASPASSPEP--ADTK-PAGDKSPAAAPSKSDAAAPTAAPKASASSPRAAATAPEAESPATSPAGDESPVSSPAS
        MARQ VVL LL    +    AA+APSASP  SP P  A TK P       +AP+K+ AAAP +   +SASSP+  A++P AE P      D+   SSP+ 
Subjt:  MARQLVVLALLFAAVVGIVSAAEAPSASPASSPEP--ADTK-PAGDKSPAAAPSKSDAAAPTAAPKASASSPRAAATAPEAESPATSPAGDESPVSSPAS

Query:  DAD---VSSPPSPTGPASGPASDGGAAAADAPAPDSETPASGASFSKVSAVAGVCAVAGFFAF
         A+   VSSPP+PT P S  A+DG      +  P +E+P SGA  +   +V G  A  GFF F
Subjt:  DAD---VSSPPSPTGPASGPASDGGAAAADAPAPDSETPASGASFSKVSAVAGVCAVAGFFAF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCGTCAATTAGTTGTCCTCGCTCTTCTCTTCGCCGCCGTCGTCGGCATTGTCTCCGCCGCCGAAGCCCCATCTGCCTCGCCGGCCTCTTCACCCGAGCCCGCAGA
CACTAAACCCGCCGGCGACAAGTCCCCGGCAGCTGCTCCATCCAAATCCGACGCCGCCGCCCCTACCGCCGCACCCAAAGCTTCTGCTTCTTCCCCCAGGGCGGCGGCCA
CAGCCCCTGAAGCGGAATCCCCTGCCACCAGCCCCGCCGGCGATGAGTCCCCTGTTTCATCCCCTGCATCCGACGCCGACGTGTCGTCTCCACCTTCTCCTACCGGACCT
GCCTCTGGACCCGCCAGTGACGGCGGAGCTGCTGCTGCTGATGCACCGGCGCCCGACTCTGAGACTCCGGCCAGTGGTGCTTCGTTCTCTAAGGTGTCTGCCGTTGCCGG
AGTTTGTGCCGTTGCGGGGTTCTTTGCGTTTTAA
mRNA sequenceShow/hide mRNA sequence
CATAGTGCAAATTATGAGACAGTGGAACAATAGAGCTTAACCCACAATCCATTTTGAGATTGATTTTGATGAAAATTTGTTACTATTTTAGAGTTTTGCTGAAGACCAGG
TCGCAGCCATCTAAAAATGGCGGAAATCCTGCAAATCTGGAGAGCCTCCAACCGGAAACAGAATCCTCCGGCGACGGCGGGTGTTAAACTCCTTTAAATACCCATCTTCT
TCCTTCCTTCAAACTCATTCTCTGGTTTTGCAGTTTTTCTCTATAATTCCTTAGAGGATTTCTGCAACCACCTTCAGAATCTTATATCAATAAAATCTTCCTCTGTTTTC
TTTTTCTTCTGAAAATCAGCACCGATGGCCCGTCAATTAGTTGTCCTCGCTCTTCTCTTCGCCGCCGTCGTCGGCATTGTCTCCGCCGCCGAAGCCCCATCTGCCTCGCC
GGCCTCTTCACCCGAGCCCGCAGACACTAAACCCGCCGGCGACAAGTCCCCGGCAGCTGCTCCATCCAAATCCGACGCCGCCGCCCCTACCGCCGCACCCAAAGCTTCTG
CTTCTTCCCCCAGGGCGGCGGCCACAGCCCCTGAAGCGGAATCCCCTGCCACCAGCCCCGCCGGCGATGAGTCCCCTGTTTCATCCCCTGCATCCGACGCCGACGTGTCG
TCTCCACCTTCTCCTACCGGACCTGCCTCTGGACCCGCCAGTGACGGCGGAGCTGCTGCTGCTGATGCACCGGCGCCCGACTCTGAGACTCCGGCCAGTGGTGCTTCGTT
CTCTAAGGTGTCTGCCGTTGCCGGAGTTTGTGCCGTTGCGGGGTTCTTTGCGTTTTAAGGAATTTTAAATTTAAAGCGATGGGTTGGGATTGTATTTGAAGAAATTTATA
TTATGAGGCTCTTATTTAATATTGTATTTGGCCATTTATTATGAATACAGAGGGATGATCAATTTC
Protein sequenceShow/hide protein sequence
MARQLVVLALLFAAVVGIVSAAEAPSASPASSPEPADTKPAGDKSPAAAPSKSDAAAPTAAPKASASSPRAAATAPEAESPATSPAGDESPVSSPASDADVSSPPSPTGP
ASGPASDGGAAAADAPAPDSETPASGASFSKVSAVAGVCAVAGFFAF