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Sed0023239 (gene) of Chayote v1 genome

Gene IDSed0023239
OrganismSechium edule (Chayote v1)
DescriptionProlamin_like domain-containing protein
Genome locationLG09:4484925..4485326
RNA-Seq ExpressionSed0023239
SyntenySed0023239
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR008502 - Prolamin-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046835.1 hypothetical protein E6C27_scaffold216G001330 [Cucumis melo var. makuwa]9.2e-4469.17Show/hide
Query:  ILPWTIILATLVPPSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCVEAFTFWFDFPDLEALKLN
        IL + I L+ LV  S   +DYNSPIW+GWVDEDRGYTLRPCLD +R+AKCQVELY YYFNISKKELDLNCCVFVK MGK C +AFTFW+ FP LE  + N
Subjt:  ILPWTIILATLVPPSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCVEAFTFWFDFPDLEALKLN

Query:  PMMAYKNCVRRLDAPQPSKY
        PM  Y NC+ RLDAP P+ +
Subjt:  PMMAYKNCVRRLDAPQPSKY

KAA0046841.1 hypothetical protein E6C27_scaffold216G001410 [Cucumis melo var. makuwa]5.6e-4162.96Show/hide
Query:  MTKKTNTVVTLMGILPWTIILATLVPPSMA--ADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCVEAF
        M   TNTV  ++ IL   + LA LV PSMA   DDYNSPIWNGWVDEDR   LRPCLDM+++AKCQV+LY YYFNISKKELDL CCVFVK MGK C  AF
Subjt:  MTKKTNTVVTLMGILPWTIILATLVPPSMA--ADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCVEAF

Query:  TFWFDFPDLEALKLNPMMAYKNCVRRLDAPQPSKY
          W++FP LE  + NPM+ Y NCV RL A  P+ +
Subjt:  TFWFDFPDLEALKLNPMMAYKNCVRRLDAPQPSKY

KAE8646662.1 hypothetical protein Csa_004797, partial [Cucumis sativus]1.0e-3466.07Show/hide
Query:  KTNTVVTLMGILPWTIILATLVPPSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCVEAFTFWFD
        KTN +  ++ IL  TI LA LV P    +DYNS IWN W+DEDR +TLRPCLD +R+AKCQVELY YYFNISK+ELDLNCCVFVK MGK C +AFTFW+ 
Subjt:  KTNTVVTLMGILPWTIILATLVPPSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCVEAFTFWFD

Query:  FPDLEALKLNPM
        FP LE  + NPM
Subjt:  FPDLEALKLNPM

KAG6578867.1 hypothetical protein SDJN03_23315, partial [Cucurbita argyrosperma subsp. sororia]5.1e-4268.85Show/hide
Query:  MGILPWTIILATLVPPSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCVEAFTFWFDFPDLEALK
        M IL   I LA L  PS A DDYNSPIW+ WVDEDRG  LRPCLDM+++AKCQVELY YYFNISKKELDLNCCVFVK MGK C  AF  WF FP+ E  +
Subjt:  MGILPWTIILATLVPPSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCVEAFTFWFDFPDLEALK

Query:  LNPMMAYKNCVRRLDAPQPSKY
        LNPM  YKNCV RLDA  P+ +
Subjt:  LNPMMAYKNCVRRLDAPQPSKY

KGN50979.1 hypothetical protein Csa_008880 [Cucumis sativus]5.1e-3454.2Show/hide
Query:  MTKKTNTVVTLMGILPWTIILATLVPPSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCVEAFTF
        M   T  ++ ++ +    +    LV PS   D+  S IW+ W+DEDR  TL PCL M+R+ KCQVELY YYFNISKKELDL+CCV+V +MGK C  AF F
Subjt:  MTKKTNTVVTLMGILPWTIILATLVPPSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCVEAFTF

Query:  WFDFPDLEALKLNPMMAYKNCVRRLDAPQPS
        WF FP LEALK NPM  Y NC +RL  P P+
Subjt:  WFDFPDLEALKLNPMMAYKNCVRRLDAPQPS

TrEMBL top hitse value%identityAlignment
A0A0A0KEB8 Prolamin_like domain-containing protein7.9e-4164.12Show/hide
Query:  MTKKTNTVVTLMGILPWTIILATLVPPSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCVEAFTF
        M  KTN  +  M IL   I LA LV  S   +DYNS IWN W+DEDR +TLRPCLD +R+AKCQVELY YYFNISKKELDLNCCVFVK MGK C +AFTF
Subjt:  MTKKTNTVVTLMGILPWTIILATLVPPSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCVEAFTF

Query:  WFDFPDLEALKLNPMMAYKNCVRRLDAPQPS
        W+ FP LE  + NPM  Y NC  RL AP P+
Subjt:  WFDFPDLEALKLNPMMAYKNCVRRLDAPQPS

A0A0A0KQ41 Prolamin_like domain-containing protein2.5e-3454.2Show/hide
Query:  MTKKTNTVVTLMGILPWTIILATLVPPSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCVEAFTF
        M   T  ++ ++ +    +    LV PS   D+  S IW+ W+DEDR  TL PCL M+R+ KCQVELY YYFNISKKELDL+CCV+V +MGK C  AF F
Subjt:  MTKKTNTVVTLMGILPWTIILATLVPPSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCVEAFTF

Query:  WFDFPDLEALKLNPMMAYKNCVRRLDAPQPS
        WF FP LEALK NPM  Y NC +RL  P P+
Subjt:  WFDFPDLEALKLNPMMAYKNCVRRLDAPQPS

A0A0A0L535 Prolamin_like domain-containing protein4.2e-2644.36Show/hide
Query:  MTKKTNTVVTLMGILPWTIILA---TLVPPSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCVEA
        M K +N+   L+ ++  ++++     LV PS+  D+  S IW+GW+D+DR   L  CL ++++ KCQVELY YYFN SKKE+DL+CCV+V ++G+ C  +
Subjt:  MTKKTNTVVTLMGILPWTIILA---TLVPPSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCVEA

Query:  FTFWFDFPDLEALKLNPMMAYKNCVRRLDAPQP
        F  WF     +ALK NPM  Y NC +RL  P P
Subjt:  FTFWFDFPDLEALKLNPMMAYKNCVRRLDAPQP

A0A5A7TZR1 Prolamin_like domain-containing protein2.7e-4162.96Show/hide
Query:  MTKKTNTVVTLMGILPWTIILATLVPPSMA--ADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCVEAF
        M   TNTV  ++ IL   + LA LV PSMA   DDYNSPIWNGWVDEDR   LRPCLDM+++AKCQV+LY YYFNISKKELDL CCVFVK MGK C  AF
Subjt:  MTKKTNTVVTLMGILPWTIILATLVPPSMA--ADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCVEAF

Query:  TFWFDFPDLEALKLNPMMAYKNCVRRLDAPQPSKY
          W++FP LE  + NPM+ Y NCV RL A  P+ +
Subjt:  TFWFDFPDLEALKLNPMMAYKNCVRRLDAPQPSKY

A0A5D3C280 Prolamin_like domain-containing protein4.5e-4469.17Show/hide
Query:  ILPWTIILATLVPPSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCVEAFTFWFDFPDLEALKLN
        IL + I L+ LV  S   +DYNSPIW+GWVDEDRGYTLRPCLD +R+AKCQVELY YYFNISKKELDLNCCVFVK MGK C +AFTFW+ FP LE  + N
Subjt:  ILPWTIILATLVPPSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCVEAFTFWFDFPDLEALKLN

Query:  PMMAYKNCVRRLDAPQPSKY
        PM  Y NC+ RLDAP P+ +
Subjt:  PMMAYKNCVRRLDAPQPSKY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAAGAAAACCAACACAGTGGTGACATTAATGGGGATTCTCCCATGGACAATAATTTTGGCAACCTTAGTTCCACCCTCGATGGCAGCCGACGATTACAATTCACC
TATATGGAATGGATGGGTAGACGAGGATAGAGGATACACCCTACGACCATGTTTGGATATGATAAGGAATGCAAAATGTCAGGTGGAACTTTACAAGTACTACTTCAATA
TAAGTAAGAAAGAATTGGATCTAAATTGTTGCGTCTTCGTTAAATTCATGGGGAAGAGTTGTGTTGAAGCTTTTACTTTTTGGTTTGACTTTCCGGATTTGGAAGCCTTG
AAACTTAATCCCATGATGGCATATAAAAATTGTGTTAGAAGACTTGATGCTCCCCAACCTTCGAAATATTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAAAGAAAACCAACACAGTGGTGACATTAATGGGGATTCTCCCATGGACAATAATTTTGGCAACCTTAGTTCCACCCTCGATGGCAGCCGACGATTACAATTCACC
TATATGGAATGGATGGGTAGACGAGGATAGAGGATACACCCTACGACCATGTTTGGATATGATAAGGAATGCAAAATGTCAGGTGGAACTTTACAAGTACTACTTCAATA
TAAGTAAGAAAGAATTGGATCTAAATTGTTGCGTCTTCGTTAAATTCATGGGGAAGAGTTGTGTTGAAGCTTTTACTTTTTGGTTTGACTTTCCGGATTTGGAAGCCTTG
AAACTTAATCCCATGATGGCATATAAAAATTGTGTTAGAAGACTTGATGCTCCCCAACCTTCGAAATATTAA
Protein sequenceShow/hide protein sequence
MTKKTNTVVTLMGILPWTIILATLVPPSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCVEAFTFWFDFPDLEAL
KLNPMMAYKNCVRRLDAPQPSKY