; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0023243 (gene) of Chayote v1 genome

Gene IDSed0023243
OrganismSechium edule (Chayote v1)
Description50S ribosomal protein L24
Genome locationLG07:32723072..32729416
RNA-Seq ExpressionSed0023243
SyntenySed0023243
Gene Ontology termsGO:0032544 - plastid translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR003256 - Ribosomal protein L24
IPR005824 - KOW
IPR005825 - Ribosomal protein L24/L26, conserved site
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR041988 - Ribosomal protein L26/L24, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008452322.1 PREDICTED: 50S ribosomal protein L24, chloroplastic [Cucumis melo]4.0e-8890.62Show/hide
Query:  MGAMAALQTSMTALSLSSNSFFGQRLPPPPAIYIPPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITQIFKHNSK
        M AMAALQ+SMTALSLSSNSF GQRL PPP IY  P+TSKEKPCLIVM+LKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEIT+IFKHNSK
Subjt:  MGAMAALQTSMTALSLSSNSFFGQRLPPPPAIYIPPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITQIFKHNSK

Query:  VTVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDNTENWKKLKEEKNKTEVATTA
        V V EINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNV SRVGHK LE+GKRVRYLIKTGEIID+TENWKKLKE K+KTEVATTA
Subjt:  VTVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDNTENWKKLKEEKNKTEVATTA

XP_022142723.1 50S ribosomal protein L24, chloroplastic [Momordica charantia]2.0e-8790.62Show/hide
Query:  MGAMAALQTSMTALSLSSNSFFGQRLPPPPAIYIPPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITQIFKHNSK
        M AMAALQ+SMT+LSLSSNSF GQRL P P IY  PVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEIT+IFKHNSK
Subjt:  MGAMAALQTSMTALSLSSNSFFGQRLPPPPAIYIPPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITQIFKHNSK

Query:  VTVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDNTENWKKLKEEKNKTEVATTA
        V VKEINLKTKHVKSREEEE+GQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLE+G+RVRYLIKTGEIID+ ENWKKLKEEK+KTEVA TA
Subjt:  VTVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDNTENWKKLKEEKNKTEVATTA

XP_022929523.1 50S ribosomal protein L24, chloroplastic [Cucurbita moschata]9.7e-8789.06Show/hide
Query:  MGAMAALQTSMTALSLSSNSFFGQRLPPPPAIYIPPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITQIFKHNSK
        M AM +LQ+SMTALSLSS+SF GQRL  P  I+  PVTSKEKPCLIVM+LKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEIT+IFKHNSK
Subjt:  MGAMAALQTSMTALSLSSNSFFGQRLPPPPAIYIPPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITQIFKHNSK

Query:  VTVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDNTENWKKLKEEKNKTEVATTA
        VTVKEINLKTKHVKSREEEEQGQIIK+EAPIHSSNVMLYSKE++VASRVGHKTLENGKRVRYLIKTGEIID+T+NWKKLKEEK+KTEVATTA
Subjt:  VTVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDNTENWKKLKEEKNKTEVATTA

XP_023553508.1 50S ribosomal protein L24, chloroplastic [Cucurbita pepo subsp. pepo]1.3e-8689.06Show/hide
Query:  MGAMAALQTSMTALSLSSNSFFGQRLPPPPAIYIPPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITQIFKHNSK
        M AM +LQ+SMTALSLSS+SF G RL  P  I+  PVTSKEKPCLIVM+LKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITQIFKHNSK
Subjt:  MGAMAALQTSMTALSLSSNSFFGQRLPPPPAIYIPPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITQIFKHNSK

Query:  VTVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDNTENWKKLKEEKNKTEVATTA
        VTVKEINLKTKHVKSREEEEQGQIIK+EAPIHSSNVMLYSKE++VASRVGHKTLENGKRVRYLIKTGEIID+T+NWKKLKEEK+KTEVATTA
Subjt:  VTVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDNTENWKKLKEEKNKTEVATTA

XP_038903308.1 50S ribosomal protein L24, chloroplastic [Benincasa hispida]7.2e-9092.71Show/hide
Query:  MGAMAALQTSMTALSLSSNSFFGQRLPPPPAIYIPPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITQIFKHNSK
        M AMAALQ+SMTALSLSSNSF GQRL PPP IY  PVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEIT+IFKHNSK
Subjt:  MGAMAALQTSMTALSLSSNSFFGQRLPPPPAIYIPPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITQIFKHNSK

Query:  VTVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDNTENWKKLKEEKNKTEVATTA
        V V EINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIID+ ENWKKLKEE +KTEVATTA
Subjt:  VTVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDNTENWKKLKEEKNKTEVATTA

TrEMBL top hitse value%identityAlignment
A0A0A0L6H1 KOW domain-containing protein1.8e-8688.02Show/hide
Query:  MGAMAALQTSMTALSLSSNSFFGQRLPPPPAIYIPPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITQIFKHNSK
        M AMAALQ+SMTALSLSSNSF GQRL PPP IY  P+TSKEKPCLIVM+LKRWERKECKPNSLPV+HKMHVK+GDTVKVIAGRDKGKIGEIT+IFKHNSK
Subjt:  MGAMAALQTSMTALSLSSNSFFGQRLPPPPAIYIPPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITQIFKHNSK

Query:  VTVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDNTENWKKLKEEKNKTEVATTA
        V V EINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQ+V SRVGHK LE+GKRVRYLIKTGEIID+TENWKKLKE  +K EVATTA
Subjt:  VTVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDNTENWKKLKEEKNKTEVATTA

A0A1S3BTL8 50S ribosomal protein L24, chloroplastic1.9e-8890.62Show/hide
Query:  MGAMAALQTSMTALSLSSNSFFGQRLPPPPAIYIPPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITQIFKHNSK
        M AMAALQ+SMTALSLSSNSF GQRL PPP IY  P+TSKEKPCLIVM+LKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEIT+IFKHNSK
Subjt:  MGAMAALQTSMTALSLSSNSFFGQRLPPPPAIYIPPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITQIFKHNSK

Query:  VTVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDNTENWKKLKEEKNKTEVATTA
        V V EINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNV SRVGHK LE+GKRVRYLIKTGEIID+TENWKKLKE K+KTEVATTA
Subjt:  VTVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDNTENWKKLKEEKNKTEVATTA

A0A5D3BUT2 50S ribosomal protein L241.9e-8890.62Show/hide
Query:  MGAMAALQTSMTALSLSSNSFFGQRLPPPPAIYIPPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITQIFKHNSK
        M AMAALQ+SMTALSLSSNSF GQRL PPP IY  P+TSKEKPCLIVM+LKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEIT+IFKHNSK
Subjt:  MGAMAALQTSMTALSLSSNSFFGQRLPPPPAIYIPPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITQIFKHNSK

Query:  VTVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDNTENWKKLKEEKNKTEVATTA
        V V EINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNV SRVGHK LE+GKRVRYLIKTGEIID+TENWKKLKE K+KTEVATTA
Subjt:  VTVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDNTENWKKLKEEKNKTEVATTA

A0A6J1CNZ8 50S ribosomal protein L24, chloroplastic9.5e-8890.62Show/hide
Query:  MGAMAALQTSMTALSLSSNSFFGQRLPPPPAIYIPPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITQIFKHNSK
        M AMAALQ+SMT+LSLSSNSF GQRL P P IY  PVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEIT+IFKHNSK
Subjt:  MGAMAALQTSMTALSLSSNSFFGQRLPPPPAIYIPPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITQIFKHNSK

Query:  VTVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDNTENWKKLKEEKNKTEVATTA
        V VKEINLKTKHVKSREEEE+GQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLE+G+RVRYLIKTGEIID+ ENWKKLKEEK+KTEVA TA
Subjt:  VTVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDNTENWKKLKEEKNKTEVATTA

A0A6J1ESD2 50S ribosomal protein L24, chloroplastic4.7e-8789.06Show/hide
Query:  MGAMAALQTSMTALSLSSNSFFGQRLPPPPAIYIPPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITQIFKHNSK
        M AM +LQ+SMTALSLSS+SF GQRL  P  I+  PVTSKEKPCLIVM+LKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEIT+IFKHNSK
Subjt:  MGAMAALQTSMTALSLSSNSFFGQRLPPPPAIYIPPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITQIFKHNSK

Query:  VTVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDNTENWKKLKEEKNKTEVATTA
        VTVKEINLKTKHVKSREEEEQGQIIK+EAPIHSSNVMLYSKE++VASRVGHKTLENGKRVRYLIKTGEIID+T+NWKKLKEEK+KTEVATTA
Subjt:  VTVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDNTENWKKLKEEKNKTEVATTA

SwissProt top hitse value%identityAlignment
B1XJS8 50S ribosomal protein L244.2e-3258.41Show/hide
Query:  KPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITQIFKHNSKVTVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGK
        + +S P  HKMHVK GDTV+VI+GRDKGK+GE+ +    +SKV VK++N++TKHVK ++E E GQI   EAPIHSSNVM YS+++ VASR+G++  E+G+
Subjt:  KPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITQIFKHNSKVTVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGK

Query:  RVRYLIKTGEIID
        +VR L KTGE+ID
Subjt:  RVRYLIKTGEIID

P11893 50S ribosomal protein L24, chloroplastic7.8e-7175.26Show/hide
Query:  AMAALQTSMTALSLSSNSFFGQRLPPPPAIYIPPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITQIFKHNSKVT
        AMA+LQ+SM++LSLSSNSF GQ L P            EK CLIVM+LKRWERKECKPNSLPVLHK+HVKVGDTVKVI+G +KG+IGEIT+IFKHNS V 
Subjt:  AMAALQTSMTALSLSSNSFFGQRLPPPPAIYIPPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITQIFKHNSKVT

Query:  VKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDNTENWKKLKEEKNKT-EVATT
        VK+INLKTKHVKS +E E GQI K+EAPIHSSNVMLYSKE++V SRVGHK LENGKRVRYLIKTGEIID+ ENWKKLKE   KT EVA T
Subjt:  VKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDNTENWKKLKEEKNKT-EVATT

P27683 50S ribosomal protein L24, chloroplastic1.2e-6870.98Show/hide
Query:  MGAMAALQTSMTALSLSSNSFFGQRLPPPPAIYIPPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITQIFKHNSK
        M AMAALQ+S T+LSLSSNSF GQRL P P   +   T    PCLIVMR+KRWERK+CKPNSLP LHKMHVKVGDTVKVI+G +KGKIGEI++I KHNS 
Subjt:  MGAMAALQTSMTALSLSSNSFFGQRLPPPPAIYIPPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITQIFKHNSK

Query:  VTVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDNTENWKKLKEEK-NKTEVATTA
        V +K++NLKTKHVKS+EE EQGQIIKIEA IHSSNVMLYSKEQ VASRVGHK LE+G++VRYLIKTGEI+D  + WK+++ +K ++T VA  A
Subjt:  VTVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDNTENWKKLKEEK-NKTEVATTA

P92959 50S ribosomal protein L24, chloroplastic7.3e-6968.88Show/hide
Query:  MGAMAALQTSMTALSLS-SNSFFGQRLPPPPAIYI-PPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITQIFKHN
        M  M+ALQ+S T+LSLS S+SF GQRL  P ++ +  PV   E PCL++ +LKRWERKECKPNSLP+LHKMHVK GDTVKVI+GRDKGKIGE+T+IF HN
Subjt:  MGAMAALQTSMTALSLS-SNSFFGQRLPPPPAIYI-PPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITQIFKHN

Query:  SKVTVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDNTENWKKLKEEKNK--TEVATTA
        S + +K++NLKTKH+KSREE E GQI+KIEAPIHSSNVMLYSKE++V SRVGHK LE+G++VRYLIKTGE+ID  E WK LKE K+K  T+VA T+
Subjt:  SKVTVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDNTENWKKLKEEKNK--TEVATTA

Q02764 50S ribosomal protein L24, chloroplastic9.2e-7274.74Show/hide
Query:  MAALQTSMTALSLSSNSFFGQRLPPPPAIYIPP-VTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITQIFKHNSKVT
        MAALQ+S   L   S SFFGQR  PP  + +PP V S E PCLI  +LKRWERKECKPNSLPVLHKMHVK+GDTVK+I+G DKGK+GEIT+I KHNSKV 
Subjt:  MAALQTSMTALSLSSNSFFGQRLPPPPAIYIPP-VTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITQIFKHNSKVT

Query:  VKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDNTENWKKLKEEKNKTEVATTA
        VK++NLKTKHVKSR E+E GQI+KIEAPIHSSNVMLYSKEQ VASRVGHKTL+NGKRVRYLIKTGEIID+ ENWKK  +EK KT  A  A
Subjt:  VKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDNTENWKKLKEEKNKTEVATTA

Arabidopsis top hitse value%identityAlignment
AT5G23535.1 KOW domain-containing protein3.2e-1139.36Show/hide
Query:  GDTVKVIAGRDKGKIGEITQIFKHNSKVTVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTG
        GD V +I G+DKG+ G I ++ +  ++V V+  NL  KH+K   + E G I  +EAP+H+SNV +         +VG K LE+G +VR    TG
Subjt:  GDTVKVIAGRDKGKIGEITQIFKHNSKVTVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTG

AT5G54600.1 Translation protein SH3-like family protein5.2e-7068.88Show/hide
Query:  MGAMAALQTSMTALSLS-SNSFFGQRLPPPPAIYI-PPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITQIFKHN
        M  M+ALQ+S T+LSLS S+SF GQRL  P ++ +  PV   E PCL++ +LKRWERKECKPNSLP+LHKMHVK GDTVKVI+GRDKGKIGE+T+IF HN
Subjt:  MGAMAALQTSMTALSLS-SNSFFGQRLPPPPAIYI-PPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITQIFKHN

Query:  SKVTVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDNTENWKKLKEEKNK--TEVATTA
        S + +K++NLKTKH+KSREE E GQI+KIEAPIHSSNVMLYSKE++V SRVGHK LE+G++VRYLIKTGE+ID  E WK LKE K+K  T+VA T+
Subjt:  SKVTVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDNTENWKKLKEEKNK--TEVATTA

AT5G54600.2 Translation protein SH3-like family protein1.2e-5862.24Show/hide
Query:  MGAMAALQTSMTALSLS-SNSFFGQRLPPPPAIYI-PPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITQIFKHN
        M  M+ALQ+S T+LSLS S+SF GQRL  P ++ +  PV   E PCL++ +LKRWERKECKPNSLP+LHKMHVK GDTVKVI+GRDKGKIGE+T+IF HN
Subjt:  MGAMAALQTSMTALSLS-SNSFFGQRLPPPPAIYI-PPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITQIFKHN

Query:  SKVTVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDNTENWKKLKEEKNK--TEVATTA
        S +                    GQI+KIEAPIHSSNVMLYSKE++V SRVGHK LE+G++VRYLIKTGE+ID  E WK LKE K+K  T+VA T+
Subjt:  SKVTVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDNTENWKKLKEEKNK--TEVATTA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCCATGGCTGCGCTTCAAACCTCCATGACCGCACTTTCGCTCTCCTCCAATTCGTTCTTCGGCCAGCGCCTTCCTCCTCCACCCGCAATTTACATCCCGCCGGT
AACGTCAAAAGAGAAGCCATGTCTCATAGTAATGAGGCTAAAAAGATGGGAACGTAAGGAATGTAAGCCAAACAGCCTTCCAGTATTGCATAAAATGCATGTCAAGGTTG
GAGACACAGTGAAAGTTATAGCTGGCCGTGATAAGGGAAAAATTGGAGAAATCACGCAAATTTTTAAACATAATAGCAAAGTGACAGTGAAAGAAATTAATTTGAAGACA
AAGCATGTAAAGAGCAGGGAGGAGGAGGAACAAGGACAGATTATTAAGATTGAAGCACCTATCCACAGCTCCAATGTAATGCTTTACTCAAAAGAACAGAATGTAGCAAG
CCGGGTCGGACACAAAACCCTTGAAAATGGAAAACGAGTCCGTTACCTCATAAAAACTGGGGAAATCATTGATAACACAGAAAATTGGAAGAAACTGAAGGAAGAGAAGA
ACAAAACTGAAGTCGCTACAACTGCCTAA
mRNA sequenceShow/hide mRNA sequence
CTTGTATCCATCCAGTTCGCGGTATTTAGATGTTGAGTTGCATTATCCATTTGTAAAGCTCCCGAATAGCAGTCTGAGAGAGAAGCCATAACCAGCAGCGGCAAAGATGG
GAGCCATGGCTGCGCTTCAAACCTCCATGACCGCACTTTCGCTCTCCTCCAATTCGTTCTTCGGCCAGCGCCTTCCTCCTCCACCCGCAATTTACATCCCGCCGGTAACG
TCAAAAGAGAAGCCATGTCTCATAGTAATGAGGCTAAAAAGATGGGAACGTAAGGAATGTAAGCCAAACAGCCTTCCAGTATTGCATAAAATGCATGTCAAGGTTGGAGA
CACAGTGAAAGTTATAGCTGGCCGTGATAAGGGAAAAATTGGAGAAATCACGCAAATTTTTAAACATAATAGCAAAGTGACAGTGAAAGAAATTAATTTGAAGACAAAGC
ATGTAAAGAGCAGGGAGGAGGAGGAACAAGGACAGATTATTAAGATTGAAGCACCTATCCACAGCTCCAATGTAATGCTTTACTCAAAAGAACAGAATGTAGCAAGCCGG
GTCGGACACAAAACCCTTGAAAATGGAAAACGAGTCCGTTACCTCATAAAAACTGGGGAAATCATTGATAACACAGAAAATTGGAAGAAACTGAAGGAAGAGAAGAACAA
AACTGAAGTCGCTACAACTGCCTAAGACTCCTTTTTCCAACTGTACTTACCACTGCTGTAAAGGGTATATTTCAGTTGCTCTTTCTCCTTTCTTTAGCAAACATTTTTGT
TGTGGTCTGTTTCATCATTGATGCACAGTGAAGTGATACGATTTGGTAGTTGATTGTTTATTTATATGAAATGCTGGTCGTTTACTTTTCTATTATCACCAATTATTTTC
TAGTTCTTGTTTTGAATTTGCTATCCAGATGGTACATCATAACTAGAAATCTTTCTGTTGATCTTGCT
Protein sequenceShow/hide protein sequence
MGAMAALQTSMTALSLSSNSFFGQRLPPPPAIYIPPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITQIFKHNSKVTVKEINLKT
KHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDNTENWKKLKEEKNKTEVATTA