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Sed0023258 (gene) of Chayote v1 genome

Gene IDSed0023258
OrganismSechium edule (Chayote v1)
DescriptionCASP-like protein
Genome locationLG11:11095498..11105647
RNA-Seq ExpressionSed0023258
SyntenySed0023258
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR006702 - Casparian strip membrane protein domain
IPR045009 - CASP-like protein 5


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583581.1 CASP-like protein 5A2, partial [Cucurbita argyrosperma subsp. sororia]6.7e-3878.95Show/hide
Query:  MNVSHATVHPVEDPPTIDEANAPRVRMKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSL------------SRSL
        MNVSHATVHP EDPPT D ANAP VRMKDMEGM GTRGGLALR  QF+FAAAAL VMATTSDFPSVT FCYLVAAAGLQSLWSL             RSL
Subjt:  MNVSHATVHPVEDPPTIDEANAPRVRMKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSL------------SRSL

Query:  QNCRIVSLFIIGDG
        QNCRIVSLF IGDG
Subjt:  QNCRIVSLFIIGDG

XP_008462581.1 PREDICTED: CASP-like protein 5A2 [Cucumis melo]6.7e-3879.82Show/hide
Query:  MNVSHATVHPVEDPPTIDEANAPRVRMKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSL------------SRSL
        MNVSHATVHPVEDPPT D ANAP VRMKDMEGM GTRGGLALR  QF FAAAAL VMATTSDFPSVT FCYLVAAAGLQSLWSL             RSL
Subjt:  MNVSHATVHPVEDPPTIDEANAPRVRMKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSL------------SRSL

Query:  QNCRIVSLFIIGDG
        QNCRIVSLF IGDG
Subjt:  QNCRIVSLFIIGDG

XP_022937859.1 CASP-like protein 5A2 [Cucurbita moschata]9.7e-3777.19Show/hide
Query:  MNVSHATVHPVEDPPTIDEANAPRVRMKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSL------------SRSL
        M+VSHATVHPVEDPPT D  +APRVRMKDMEGM GTRGGLALR SQF+FAAAAL VMATTSDFPSV  FCYLVAAAGLQSLWSL             RSL
Subjt:  MNVSHATVHPVEDPPTIDEANAPRVRMKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSL------------SRSL

Query:  QNCRIVSLFIIGDG
        +NCRIVSLF IGDG
Subjt:  QNCRIVSLFIIGDG

XP_022964943.1 CASP-like protein 5A2 [Cucurbita moschata]6.7e-3878.95Show/hide
Query:  MNVSHATVHPVEDPPTIDEANAPRVRMKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSL------------SRSL
        MNVSHATVHP EDPPT D ANAP VRMKDMEGM GTRGGLALR  QF+FAAAAL VMATTSDFPSVT FCYLVAAAGLQSLWSL             RSL
Subjt:  MNVSHATVHPVEDPPTIDEANAPRVRMKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSL------------SRSL

Query:  QNCRIVSLFIIGDG
        QNCRIVSLF IGDG
Subjt:  QNCRIVSLFIIGDG

XP_022970342.1 CASP-like protein 5A2 [Cucurbita maxima]6.7e-3878.95Show/hide
Query:  MNVSHATVHPVEDPPTIDEANAPRVRMKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSL------------SRSL
        MNVSHATVHP EDPPT D ANAP VRMKDMEGM GTRGGLALR  QF+FAAAAL VMATTSDFPSVT FCYLVAAAGLQSLWSL             RSL
Subjt:  MNVSHATVHPVEDPPTIDEANAPRVRMKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSL------------SRSL

Query:  QNCRIVSLFIIGDG
        QNCRIVSLF IGDG
Subjt:  QNCRIVSLFIIGDG

TrEMBL top hitse value%identityAlignment
A0A1S3CIU9 CASP-like protein3.2e-3879.82Show/hide
Query:  MNVSHATVHPVEDPPTIDEANAPRVRMKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSL------------SRSL
        MNVSHATVHPVEDPPT D ANAP VRMKDMEGM GTRGGLALR  QF FAAAAL VMATTSDFPSVT FCYLVAAAGLQSLWSL             RSL
Subjt:  MNVSHATVHPVEDPPTIDEANAPRVRMKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSL------------SRSL

Query:  QNCRIVSLFIIGDG
        QNCRIVSLF IGDG
Subjt:  QNCRIVSLFIIGDG

A0A5D3C7L3 CASP-like protein3.2e-3879.82Show/hide
Query:  MNVSHATVHPVEDPPTIDEANAPRVRMKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSL------------SRSL
        MNVSHATVHPVEDPPT D ANAP VRMKDMEGM GTRGGLALR  QF FAAAAL VMATTSDFPSVT FCYLVAAAGLQSLWSL             RSL
Subjt:  MNVSHATVHPVEDPPTIDEANAPRVRMKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSL------------SRSL

Query:  QNCRIVSLFIIGDG
        QNCRIVSLF IGDG
Subjt:  QNCRIVSLFIIGDG

A0A6J1HME3 CASP-like protein3.2e-3878.95Show/hide
Query:  MNVSHATVHPVEDPPTIDEANAPRVRMKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSL------------SRSL
        MNVSHATVHP EDPPT D ANAP VRMKDMEGM GTRGGLALR  QF+FAAAAL VMATTSDFPSVT FCYLVAAAGLQSLWSL             RSL
Subjt:  MNVSHATVHPVEDPPTIDEANAPRVRMKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSL------------SRSL

Query:  QNCRIVSLFIIGDG
        QNCRIVSLF IGDG
Subjt:  QNCRIVSLFIIGDG

A0A6J1HYU4 CASP-like protein3.2e-3878.95Show/hide
Query:  MNVSHATVHPVEDPPTIDEANAPRVRMKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSL------------SRSL
        MNVSHATVHP EDPPT D ANAP VRMKDMEGM GTRGGLALR  QF+FAAAAL VMATTSDFPSVT FCYLVAAAGLQSLWSL             RSL
Subjt:  MNVSHATVHPVEDPPTIDEANAPRVRMKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSL------------SRSL

Query:  QNCRIVSLFIIGDG
        QNCRIVSLF IGDG
Subjt:  QNCRIVSLFIIGDG

A0A6J1I0G8 CASP-like protein4.7e-3777.19Show/hide
Query:  MNVSHATVHPVEDPPTIDEANAPRVRMKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSL------------SRSL
        M+VSHATVHPVEDPPT D  +APRVRMKDMEGM GTRGGLALR SQF+FAAAAL VMATTSDFPSV  FCYLVAAAGLQSLWSL             RSL
Subjt:  MNVSHATVHPVEDPPTIDEANAPRVRMKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSL------------SRSL

Query:  QNCRIVSLFIIGDG
        +NCRIVSLF IGDG
Subjt:  QNCRIVSLFIIGDG

SwissProt top hitse value%identityAlignment
P0DI68 CASP-like protein 5A12.8e-2356.52Show/hide
Query:  MNVSHATVHPVEDPPTIDEANAPR-VRMKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSLS------------RS
        M  S   VHPVE PP  D    P  V MKD+ GM GT GGL LR++QFVFA  AL VMA+TSDFPSVT FCYLVAA  +Q LWS S            R 
Subjt:  MNVSHATVHPVEDPPTIDEANAPR-VRMKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSLS------------RS

Query:  LQNCRIVSLFIIGDG
        L+N R V LF IGDG
Subjt:  LQNCRIVSLFIIGDG

P0DI69 CASP-like protein 5A27.0e-2250Show/hide
Query:  MNVSHATVHPVEDPPTIDEANAPRVRMKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSLS------------RSL
        MN SH  VHPV  PP +     PR+RMK+++GM GT GGL LRL QF FA  A  +M +  +F +VT FCYLVAA  LQ LWSL+            RSL
Subjt:  MNVSHATVHPVEDPPTIDEANAPRVRMKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSLS------------RSL

Query:  QNCRIVSLFIIGDG
        +N  +VSL ++GDG
Subjt:  QNCRIVSLFIIGDG

P0DI70 CASP-like protein 5A11.6e-2658.77Show/hide
Query:  MNVSHATVHPVEDPPTIDEANAPRVRMKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSLS------------RSL
        MN SH  VHPVE PPT D  +APRVRMKD +GM GT GGLALRL QF FA  A  +M +T DF +VT FCYLVAA  LQ LWSL+            RSL
Subjt:  MNVSHATVHPVEDPPTIDEANAPRVRMKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSLS------------RSL

Query:  QNCRIVSLFIIGDG
        +N  +VSLF++GDG
Subjt:  QNCRIVSLFIIGDG

Q10Q78 CASP-like protein 5A11.5e-2459.13Show/hide
Query:  MNVSHATVHPVEDPPTIDEANAPR-VRMKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSLS------------RS
        M  S   VHPVE PP  D A  PR V MKD+ GM GT GGL LRL+QF FAA AL VMA+T+DFPSVT+FC+LVAAA LQ LWS S            R 
Subjt:  MNVSHATVHPVEDPPTIDEANAPR-VRMKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSLS------------RS

Query:  LQNCRIVSLFIIGDG
        L+N R V LF IGDG
Subjt:  LQNCRIVSLFIIGDG

Q9SKN3 CASP-like protein 5A21.5e-3268.97Show/hide
Query:  MNVSHATVHPVEDPP--TIDEANAPRVRMKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSLS------------R
        MNVSHA+VHPVEDPP    +  N PRVRM DMEGM GT  GLALR  QF+FAAAAL VMA+TSDFPSVT FCYLVAA GLQSLWSL+            R
Subjt:  MNVSHATVHPVEDPP--TIDEANAPRVRMKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSLS------------R

Query:  SLQNCRIVSLFIIGDG
        SLQN R+VSLF IGDG
Subjt:  SLQNCRIVSLFIIGDG

Arabidopsis top hitse value%identityAlignment
AT2G28370.1 Uncharacterised protein family (UPF0497)1.1e-3368.97Show/hide
Query:  MNVSHATVHPVEDPP--TIDEANAPRVRMKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSLS------------R
        MNVSHA+VHPVEDPP    +  N PRVRM DMEGM GT  GLALR  QF+FAAAAL VMA+TSDFPSVT FCYLVAA GLQSLWSL+            R
Subjt:  MNVSHATVHPVEDPP--TIDEANAPRVRMKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSLS------------R

Query:  SLQNCRIVSLFIIGDG
        SLQN R+VSLF IGDG
Subjt:  SLQNCRIVSLFIIGDG

AT2G37200.1 Uncharacterised protein family (UPF0497)2.5e-2253.85Show/hide
Query:  MNVSHATVHPVEDPPTIDEANA---PRVRMKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSLS------------
        MNVS   +HPV+  P    A A   P VRMKD++GM GT GGL LRLSQFV A  ++ VM TTSDF S T FC LV A  LQSLWSLS            
Subjt:  MNVSHATVHPVEDPPTIDEANA---PRVRMKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSLS------------

Query:  RSLQNCRIVSLFIIGDG
        RSL+N  +V  F IGDG
Subjt:  RSLQNCRIVSLFIIGDG

AT3G23200.1 Uncharacterised protein family (UPF0497)4.4e-1143.68Show/hide
Query:  MKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSL------------SRSLQNCRIVSLFIIGD
        M D+ G  GT  GL LR+SQ VFAA ++  M T+  F S T FCYL+AA GLQ +WS              ++L +  +VSLF++GD
Subjt:  MKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSL------------SRSLQNCRIVSLFIIGD

AT3G53850.1 Uncharacterised protein family (UPF0497)6.3e-1042.53Show/hide
Query:  MKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSL------------SRSLQNCRIVSLFIIGD
        MK + G  GT  GL LR+ Q   AAA++ VM +  +F   T FCYL+A+ GLQ LWS              + LQN  +VSLF++GD
Subjt:  MKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSL------------SRSLQNCRIVSLFIIGD

AT5G02060.1 Uncharacterised protein family (UPF0497)1.8e-0941.38Show/hide
Query:  MKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSL------------SRSLQNCRIVSLFIIGD
        MK M G  GT  GL LRL Q   AAA++ VM ++ DF + T FC+LVA+ GLQ +WS                L++  ++SLF +GD
Subjt:  MKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSL------------SRSLQNCRIVSLFIIGD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGTGAGTCATGCGACGGTTCACCCGGTCGAAGATCCCCCCACAATCGATGAGGCCAATGCGCCCAGGGTTAGGATGAAGGACATGGAGGGCATGCTAGGCACCCG
TGGCGGCCTCGCTTTGCGACTATCTCAGTTTGTGTTCGCAGCGGCGGCCCTGTTCGTCATGGCTACTACCTCCGATTTCCCTTCCGTTACTACCTTTTGCTATCTTGTTG
CAGCAGCTGGTTTGCAGAGTTTGTGGAGTCTCTCAAGATCGTTACAAAATTGCAGGATAGTCAGCTTATTCATTATTGGTGATGGGGGCATTTTTATGGTTGCTACGGAG
AGAAAGGAACAACAAAATCTTCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGTGAGTCATGCGACGGTTCACCCGGTCGAAGATCCCCCCACAATCGATGAGGCCAATGCGCCCAGGGTTAGGATGAAGGACATGGAGGGCATGCTAGGCACCCG
TGGCGGCCTCGCTTTGCGACTATCTCAGTTTGTGTTCGCAGCGGCGGCCCTGTTCGTCATGGCTACTACCTCCGATTTCCCTTCCGTTACTACCTTTTGCTATCTTGTTG
CAGCAGCTGGTTTGCAGAGTTTGTGGAGTCTCTCAAGATCGTTACAAAATTGCAGGATAGTCAGCTTATTCATTATTGGTGATGGGGGCATTTTTATGGTTGCTACGGAG
AGAAAGGAACAACAAAATCTTCAATGACATTTCCCGGTCTTTGCAATACCTTTTAGAACAGATTCTTTCTTCTGTGTATTTCTGGTGCAAGTCAAAGCCTATATTATTTT
CTTCTTTTATTTCCAATTGGAAACTTCTGTTGTAAGGCCATGTGCCATTGGGTTTTTCCCCATATTTCATGATTTCAATGAAATGTTTCTTTTCCCCC
Protein sequenceShow/hide protein sequence
MNVSHATVHPVEDPPTIDEANAPRVRMKDMEGMLGTRGGLALRLSQFVFAAAALFVMATTSDFPSVTTFCYLVAAAGLQSLWSLSRSLQNCRIVSLFIIGDGGIFMVATE
RKEQQNLQ