; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0023264 (gene) of Chayote v1 genome

Gene IDSed0023264
OrganismSechium edule (Chayote v1)
Descriptionprotein DCL homolog, chloroplastic
Genome locationLG01:21308986..21311953
RNA-Seq ExpressionSed0023264
SyntenySed0023264
Gene Ontology termsGO:0009658 - chloroplast organization (biological process)
GO:1901259 - chloroplast rRNA processing (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR044673 - Protein DCL-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064386.1 protein DCL [Cucumis melo var. makuwa]1.7e-10082.67Show/hide
Query:  MAMASILNPPPFAPFYALNPSFFNSSPAILCFPAQPM------TRALKTGPEGTRIRSHEEFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGNDEEEV--
        MAMASIL   PF PF++LNP+FFNSSP ILCFP  P+      TRALKTGPEG+RIRSH+E+SSDLLRKPVVPPAKD+AG SEDD SSEESGNDEEE   
Subjt:  MAMASILNPPPFAPFYALNPSFFNSSPAILCFPAQPM------TRALKTGPEGTRIRSHEEFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGNDEEEV--

Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGMI
        WVDWEDKILEDTVPLVGFVRMVLH+GKY SGDRL PEHEKTIL+RLLPYHPE EKK+GCG+DYIT+GYHPDF SSRCLFIVRKDGELVDFSYWKCIKG+I
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGMI

Query:  RKKYPLHAESFILRHF-RRRRNLRR
        RK YPL+AESFILRHF RRRRNLRR
Subjt:  RKKYPLHAESFILRHF-RRRRNLRR

XP_004141259.1 protein DCL homolog, chloroplastic [Cucumis sativus]9.6e-9981.33Show/hide
Query:  MAMASILNPPPFAPFYALNPSFFNSSPAILCFPAQPM------TRALKTGPEGTRIRSHEEFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGN-DEEEV-
        MAMASIL PPPF PF++LNP+FFNSSP ILCFP  P+      TRALKTGPEG R+RSH+E+SSDLLRKPV P AKD+AG SEDD SSEESGN DEEEV 
Subjt:  MAMASILNPPPFAPFYALNPSFFNSSPAILCFPAQPM------TRALKTGPEGTRIRSHEEFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGN-DEEEV-

Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGMI
        WVDWEDKILEDTVPLVGFVRMVLH+GKY +GDRL PEHEKTIL+RLLPYHPE EKK+GCG+DYIT+GYHPDF SSRCLFIVRKDGE+VDFSYWKCIKG+I
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGMI

Query:  RKKYPLHAESFILRHF-RRRRNLRR
        RK YPL+AESFILRHF RRRRN RR
Subjt:  RKKYPLHAESFILRHF-RRRRNLRR

XP_008452556.1 PREDICTED: protein DCL, chloroplastic [Cucumis melo]1.7e-10082.67Show/hide
Query:  MAMASILNPPPFAPFYALNPSFFNSSPAILCFPAQPM------TRALKTGPEGTRIRSHEEFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGNDEEEV--
        MAMASIL   PF PF++LNP+FFNSSP ILCFP  P+      TRALKTGPEG+RIRSH+E+SSDLLRKPVVPPAKD+AG SEDD SSEESGNDEEE   
Subjt:  MAMASILNPPPFAPFYALNPSFFNSSPAILCFPAQPM------TRALKTGPEGTRIRSHEEFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGNDEEEV--

Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGMI
        WVDWEDKILEDTVPLVGFVRMVLH+GKY SGDRL PEHEKTIL+RLLPYHPE EKK+GCG+DYIT+GYHPDF SSRCLFIVRKDGELVDFSYWKCIKG+I
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGMI

Query:  RKKYPLHAESFILRHF-RRRRNLRR
        RK YPL+AESFILRHF RRRRNLRR
Subjt:  RKKYPLHAESFILRHF-RRRRNLRR

XP_022133006.1 protein DCL homolog, chloroplastic [Momordica charantia]1.1e-10285.45Show/hide
Query:  MAMASILNPPPFAPFYALNPSFFNSSPAILCFPAQPMT------RALKTGPEGTRIRSHEEFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGND--EEEV
        MAMAS+  PPPF PF++LNPSF NSSP ILCFP  PMT      RALKTGPEG+RIRSHEE+SSDLLRKPVVPPAKD A  SEDD  SEESG D  EEE 
Subjt:  MAMASILNPPPFAPFYALNPSFFNSSPAILCFPAQPMT------RALKTGPEGTRIRSHEEFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGND--EEEV

Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGMI
        WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLS EHEKTILDRLLPYHPECEKK+GCGIDYITIGYHPDF SSRCLFIVRKDGELVDFSYWKCIKG+I
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGMI

Query:  RKKYPLHAESFILRHFRRRR
        RK YPLHAESFILRHFRRRR
Subjt:  RKKYPLHAESFILRHFRRRR

XP_038897137.1 protein DCL homolog, chloroplastic [Benincasa hispida]5.2e-10586.22Show/hide
Query:  MAMASILNPPPFAPFYALNPSFFNSSPAILCFPAQPM------TRALKTGPEGTRIRSHEEFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGND--EEEV
        MAMASIL PPPF P ++LNP+FFNSSP ILCFP QPM      TRALKTGPEG+RIRSHEE+SSDLLRKPVVPPA+D+A  SEDD SSEESGND  EEE 
Subjt:  MAMASILNPPPFAPFYALNPSFFNSSPAILCFPAQPM------TRALKTGPEGTRIRSHEEFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGND--EEEV

Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGMI
        WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRL+PEHEKTILDRLLPYHPE EKK+GCGIDYITIGYHPDF SSRCLFIVRKDGELVDFSYWKCIKG+I
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGMI

Query:  RKKYPLHAESFILRHF-RRRRNLRR
        RKKYPLHAESFILRHF RRRRN RR
Subjt:  RKKYPLHAESFILRHF-RRRRNLRR

TrEMBL top hitse value%identityAlignment
A0A0A0L2D0 Uncharacterized protein4.6e-9981.33Show/hide
Query:  MAMASILNPPPFAPFYALNPSFFNSSPAILCFPAQPM------TRALKTGPEGTRIRSHEEFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGN-DEEEV-
        MAMASIL PPPF PF++LNP+FFNSSP ILCFP  P+      TRALKTGPEG R+RSH+E+SSDLLRKPV P AKD+AG SEDD SSEESGN DEEEV 
Subjt:  MAMASILNPPPFAPFYALNPSFFNSSPAILCFPAQPM------TRALKTGPEGTRIRSHEEFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGN-DEEEV-

Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGMI
        WVDWEDKILEDTVPLVGFVRMVLH+GKY +GDRL PEHEKTIL+RLLPYHPE EKK+GCG+DYIT+GYHPDF SSRCLFIVRKDGE+VDFSYWKCIKG+I
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGMI

Query:  RKKYPLHAESFILRHF-RRRRNLRR
        RK YPL+AESFILRHF RRRRN RR
Subjt:  RKKYPLHAESFILRHF-RRRRNLRR

A0A1S3BVA4 protein DCL, chloroplastic8.4e-10182.67Show/hide
Query:  MAMASILNPPPFAPFYALNPSFFNSSPAILCFPAQPM------TRALKTGPEGTRIRSHEEFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGNDEEEV--
        MAMASIL   PF PF++LNP+FFNSSP ILCFP  P+      TRALKTGPEG+RIRSH+E+SSDLLRKPVVPPAKD+AG SEDD SSEESGNDEEE   
Subjt:  MAMASILNPPPFAPFYALNPSFFNSSPAILCFPAQPM------TRALKTGPEGTRIRSHEEFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGNDEEEV--

Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGMI
        WVDWEDKILEDTVPLVGFVRMVLH+GKY SGDRL PEHEKTIL+RLLPYHPE EKK+GCG+DYIT+GYHPDF SSRCLFIVRKDGELVDFSYWKCIKG+I
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGMI

Query:  RKKYPLHAESFILRHF-RRRRNLRR
        RK YPL+AESFILRHF RRRRNLRR
Subjt:  RKKYPLHAESFILRHF-RRRRNLRR

A0A5A7VDC9 Protein DCL8.4e-10182.67Show/hide
Query:  MAMASILNPPPFAPFYALNPSFFNSSPAILCFPAQPM------TRALKTGPEGTRIRSHEEFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGNDEEEV--
        MAMASIL   PF PF++LNP+FFNSSP ILCFP  P+      TRALKTGPEG+RIRSH+E+SSDLLRKPVVPPAKD+AG SEDD SSEESGNDEEE   
Subjt:  MAMASILNPPPFAPFYALNPSFFNSSPAILCFPAQPM------TRALKTGPEGTRIRSHEEFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGNDEEEV--

Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGMI
        WVDWEDKILEDTVPLVGFVRMVLH+GKY SGDRL PEHEKTIL+RLLPYHPE EKK+GCG+DYIT+GYHPDF SSRCLFIVRKDGELVDFSYWKCIKG+I
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGMI

Query:  RKKYPLHAESFILRHF-RRRRNLRR
        RK YPL+AESFILRHF RRRRNLRR
Subjt:  RKKYPLHAESFILRHF-RRRRNLRR

A0A6J1BTU2 protein DCL homolog, chloroplastic5.3e-10385.45Show/hide
Query:  MAMASILNPPPFAPFYALNPSFFNSSPAILCFPAQPMT------RALKTGPEGTRIRSHEEFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGND--EEEV
        MAMAS+  PPPF PF++LNPSF NSSP ILCFP  PMT      RALKTGPEG+RIRSHEE+SSDLLRKPVVPPAKD A  SEDD  SEESG D  EEE 
Subjt:  MAMASILNPPPFAPFYALNPSFFNSSPAILCFPAQPMT------RALKTGPEGTRIRSHEEFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGND--EEEV

Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGMI
        WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLS EHEKTILDRLLPYHPECEKK+GCGIDYITIGYHPDF SSRCLFIVRKDGELVDFSYWKCIKG+I
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGMI

Query:  RKKYPLHAESFILRHFRRRR
        RK YPLHAESFILRHFRRRR
Subjt:  RKKYPLHAESFILRHFRRRR

A0A6J1FJS0 protein DCL homolog, chloroplastic-like3.3e-9781.17Show/hide
Query:  MAMASILNPPPFAPFYALNPSFFNSSPAILCFPA------QPMTRALKTGPEGTRIRSHEEFSSDLLRKPVVPPAKDMAGSSEDDVSSEESG--NDEEEV
        MA+ASIL PPP  PF++LNPSFF SSP ILCFP        P TRAL TGPEG+RIRSHEE SSDLLRKPVVPPAKD+AG SED+ SSEESG  +DEEE 
Subjt:  MAMASILNPPPFAPFYALNPSFFNSSPAILCFPA------QPMTRALKTGPEGTRIRSHEEFSSDLLRKPVVPPAKDMAGSSEDDVSSEESG--NDEEEV

Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGMI
        WVDWE+ ILEDTVPLV FVRMVLHSGKY  GDRLSPEHEKTIL+RLLPYHP+ EKKVGCGIDYIT+ YHPD+ SSRCLFIVRKDGELVDFSYWKCIK +I
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGMI

Query:  RKKYPLHAESFILRHFRRRRNLR
        RKKYPLHAESFILRHFRRRRNLR
Subjt:  RKKYPLHAESFILRHFRRRRNLR

SwissProt top hitse value%identityAlignment
P85936 Protein DCL, chloroplastic (Fragment)7.1e-0481.82Show/hide
Query:  WVDWEDKILEDTVPLVGFVRMV
        WVDWED+IL+DTVPLV FVRM+
Subjt:  WVDWEDKILEDTVPLVGFVRMV

Q42463 Protein DCL, chloroplastic1.6e-6460.56Show/hide
Query:  NPPPFAPFYALNP---SFFNSSPAILCFPAQPMTRALKTGPEGTRIRSHEEFSSDLLRKPVVPPAKDMAGSSED---DVSSEESG--NDEEEVWVDWEDK
        N  P +    L+P   SF       LC  A     A+KTG EG  IRS    +++LLRKPV+    +    SE+   + S +E G  + + E WVDWED+
Subjt:  NPPPFAPFYALNP---SFFNSSPAILCFPAQPMTRALKTGPEGTRIRSHEEFSSDLLRKPVVPPAKDMAGSSED---DVSSEESG--NDEEEVWVDWEDK

Query:  ILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGMIRKKYPLH
        ILEDTVPLVGFVRM+LHSGKY  GDRLSP+H++TIL RLLPYHPEC+KK+G G+DYIT+GYHPDF +SRCLFIVRKDGE VDFSYWKCIKG+IRK YPL+
Subjt:  ILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGMIRKKYPLH

Query:  AESFILRHFRRRR
        A+SFILRHFR+RR
Subjt:  AESFILRHFRRRR

Q5D869 DNA-directed RNA polymerase V subunit 13.7e-2138.79Show/hide
Query:  EDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGMIRKKY
        E ++L D  P++  +R ++H   Y  GD +S + +  +L+++L +HP+ E K+G G+D+IT+  H  F  SRC F+V  DG   DFSY K +   + KKY
Subjt:  EDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGMIRKKY

Query:  PLHAESFILRHFRRRR
        P  AE FI ++F + R
Subjt:  PLHAESFILRHFRRRR

Q8L557 Protein EMBRYO DEFECTIVE 5142.9e-0543.64Show/hide
Query:  ILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCI
        +LD +   H E EKK+G GI    +  HP +  SRC F+VR+D    DFS+ KC+
Subjt:  ILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCI

Q9C642 Protein DCL homolog, chloroplastic6.3e-6958.48Show/hide
Query:  MAMASILNPPPFA-PFYALNPSF--FNSSPAILCFP------AQPMTRALKTGPEGTRIRSHEEFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGNDEEE
        M++ASI +  P A P++        F+SSP  L FP       +P  RAL+T  +G +I + E + S+LLR+P +      +  S ++   EE  N E +
Subjt:  MAMASILNPPPFA-PFYALNPSF--FNSSPAILCFP------AQPMTRALKTGPEGTRIRSHEEFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGNDEEE

Query:  VWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGM
         +VDWEDKILE TVPLVGFVRM+LHSGKY + DRLSPEHE+TI++ LLPYHPECEKK+GCGIDYI +G+HPDF SSRC+FIVRKDGE+VDFSYWKCIKG+
Subjt:  VWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGM

Query:  IRKKYPLHAESFILRHFRRRRNLR
        I+KKYPL+A+SFILRHFR+RR  R
Subjt:  IRKKYPLHAESFILRHFRRRRNLR

Arabidopsis top hitse value%identityAlignment
AT1G45230.1 Protein of unknown function (DUF3223)4.5e-7058.48Show/hide
Query:  MAMASILNPPPFA-PFYALNPSF--FNSSPAILCFP------AQPMTRALKTGPEGTRIRSHEEFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGNDEEE
        M++ASI +  P A P++        F+SSP  L FP       +P  RAL+T  +G +I + E + S+LLR+P +      +  S ++   EE  N E +
Subjt:  MAMASILNPPPFA-PFYALNPSF--FNSSPAILCFP------AQPMTRALKTGPEGTRIRSHEEFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGNDEEE

Query:  VWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGM
         +VDWEDKILE TVPLVGFVRM+LHSGKY + DRLSPEHE+TI++ LLPYHPECEKK+GCGIDYI +G+HPDF SSRC+FIVRKDGE+VDFSYWKCIKG+
Subjt:  VWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGM

Query:  IRKKYPLHAESFILRHFRRRRNLR
        I+KKYPL+A+SFILRHFR+RR  R
Subjt:  IRKKYPLHAESFILRHFRRRRNLR

AT1G45230.2 Protein of unknown function (DUF3223)3.8e-6958.04Show/hide
Query:  MAMASILNPPPFA-PFYALNPSF--FNSSPAILCFP------AQPMTRALKTGPEGTRIRSHEEFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGNDEEE
        M++ASI +  P A P++        F+SSP  L FP       +P  RAL+T  +G +I + E + S+LLR+P +      +  S ++   EE  N E +
Subjt:  MAMASILNPPPFA-PFYALNPSF--FNSSPAILCFP------AQPMTRALKTGPEGTRIRSHEEFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGNDEEE

Query:  VWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGM
         +VDWEDKILE TVPLVGFVRM+LHSGKY + DRLSPEHE+TI++ LLPYHPECEKK+GCGIDYI + +HPDF SSRC+FIVRKDGE+VDFSYWKCIKG+
Subjt:  VWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGM

Query:  IRKKYPLHAESFILRHFRRRRNLR
        I+KKYPL+A+SFILRHFR+RR  R
Subjt:  IRKKYPLHAESFILRHFRRRRNLR

AT2G40030.1 nuclear RNA polymerase D1B2.6e-2238.79Show/hide
Query:  EDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGMIRKKY
        E ++L D  P++  +R ++H   Y  GD +S + +  +L+++L +HP+ E K+G G+D+IT+  H  F  SRC F+V  DG   DFSY K +   + KKY
Subjt:  EDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGMIRKKY

Query:  PLHAESFILRHFRRRR
        P  AE FI ++F + R
Subjt:  PLHAESFILRHFRRRR

AT3G46630.1 Protein of unknown function (DUF3223)1.3e-3249.15Show/hide
Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGMI
        W + E +IL D  P+    + +LHS +Y  G+RL  E EK ++++LLPYHP  + K+GCG+D+I +  HP F  SRCLF+VR DG  +DFSY KC++  +
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGMI

Query:  RKKYPLHAESFILRHFRR
        R KYP HAE FI  HF+R
Subjt:  RKKYPLHAESFILRHFRR

AT5G62440.1 Protein of unknown function (DUF3223)2.0e-0643.64Show/hide
Query:  ILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCI
        +LD +   H E EKK+G GI    +  HP +  SRC F+VR+D    DFS+ KC+
Subjt:  ILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATGGCGTCCATTTTGAATCCACCGCCATTTGCGCCATTTTACGCCCTAAATCCAAGCTTCTTCAACTCTTCACCAGCGATCTTATGTTTTCCAGCGCAGCCAAT
GACTCGTGCCCTAAAGACTGGCCCCGAAGGCACTAGAATTCGGAGCCACGAAGAATTTAGCTCCGATTTGCTGCGGAAACCGGTTGTTCCGCCGGCGAAGGACATGGCCG
GATCATCGGAGGATGACGTGAGCAGCGAGGAGAGTGGAAATGACGAGGAGGAGGTTTGGGTTGATTGGGAGGACAAGATTTTGGAGGATACTGTTCCTCTTGTTGGCTTT
GTTAGGATGGTGCTTCACTCTGGAAAATATGGAAGTGGGGATAGGTTAAGCCCAGAACACGAGAAAACAATTCTTGACAGGTTGCTTCCATACCATCCTGAGTGTGAGAA
GAAGGTTGGATGTGGGATTGATTATATCACGATTGGATATCATCCTGATTTTGTAAGCTCAAGATGTTTATTCATAGTCAGGAAAGATGGAGAGTTGGTTGATTTTTCAT
ATTGGAAGTGCATCAAGGGTATGATCAGAAAGAAGTATCCTCTTCATGCAGAAAGCTTCATTCTTAGGCATTTTCGGCGTAGACGCAATCTCCGTCGGTAA
mRNA sequenceShow/hide mRNA sequence
GCCAGGCAGACCGGAGGATGGGGATTGAAGAAAATTTCTGTATTTTCTCCAAATCCATGAGATTGATGATAATGTGAGAGACCGTTAACAGTTCTTCTTCTTCTTCATAA
TTTTCTAATAATTTTCGAGAAAAAACGATGCTCTGCAATCGCAGGCTACAATTTCGTCCTCAATAGCTGCAAATTCAAGCTGAAACACGGGCAAGGTCATGGCCATGGCG
TCCATTTTGAATCCACCGCCATTTGCGCCATTTTACGCCCTAAATCCAAGCTTCTTCAACTCTTCACCAGCGATCTTATGTTTTCCAGCGCAGCCAATGACTCGTGCCCT
AAAGACTGGCCCCGAAGGCACTAGAATTCGGAGCCACGAAGAATTTAGCTCCGATTTGCTGCGGAAACCGGTTGTTCCGCCGGCGAAGGACATGGCCGGATCATCGGAGG
ATGACGTGAGCAGCGAGGAGAGTGGAAATGACGAGGAGGAGGTTTGGGTTGATTGGGAGGACAAGATTTTGGAGGATACTGTTCCTCTTGTTGGCTTTGTTAGGATGGTG
CTTCACTCTGGAAAATATGGAAGTGGGGATAGGTTAAGCCCAGAACACGAGAAAACAATTCTTGACAGGTTGCTTCCATACCATCCTGAGTGTGAGAAGAAGGTTGGATG
TGGGATTGATTATATCACGATTGGATATCATCCTGATTTTGTAAGCTCAAGATGTTTATTCATAGTCAGGAAAGATGGAGAGTTGGTTGATTTTTCATATTGGAAGTGCA
TCAAGGGTATGATCAGAAAGAAGTATCCTCTTCATGCAGAAAGCTTCATTCTTAGGCATTTTCGGCGTAGACGCAATCTCCGTCGGTAACGCATACAAGATCTGTTAATA
ATACTATTGTACACCATTCAATTTCAGGAATTCCTTGAATATCAAAGCTTGAAATTGGCTTACCACGCTTGTGTGGTTCTCTAGTGTGTAATGATTTGAAATGCACGAAT
GGATATAGGGTGAAGGTAGTAGACTCTTGCTTGACGAAGCTTCTTGTAAAATTGAATTTTGTAAATCCTAACCGTTACCTCCAATTTCCATGATCC
Protein sequenceShow/hide protein sequence
MAMASILNPPPFAPFYALNPSFFNSSPAILCFPAQPMTRALKTGPEGTRIRSHEEFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGNDEEEVWVDWEDKILEDTVPLVGF
VRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGMIRKKYPLHAESFILRHFRRRRNLRR