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Sed0023265 (gene) of Chayote v1 genome

Gene IDSed0023265
OrganismSechium edule (Chayote v1)
Descriptionserine-rich protein-related
Genome locationLG07:42673649..42674258
RNA-Seq ExpressionSed0023265
SyntenySed0023265
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048240.1 putative PGPS/D10 protein [Cucumis melo var. makuwa]4.3e-1560.49Show/hide
Query:  AFSEFDLEDLKRSHRH-SASPSSQSPPHKASPAAKRNCLCSPTTHVGSFRCRRHRHSAGMLRGGSVGSNLADLGRKSDQII
        A +E +L DLK ++ H   SPS  S   K   +AK NCLCSPTTH+GSFRCR HRH AGM+RGGSVGSNL+DL RK  +I+
Subjt:  AFSEFDLEDLKRSHRH-SASPSSQSPPHKASPAAKRNCLCSPTTHVGSFRCRRHRHSAGMLRGGSVGSNLADLGRKSDQII

KAF4391351.1 hypothetical protein G4B88_016661 [Cannabis sativa]7.4e-1555.24Show/hide
Query:  MDHKVEHR-APRPNHRN-NFNKQRA-FSEFDLEDLKR-SHRHSASPSSQSPPHKASPAAKRNCLCSPTTHVGSFRCRRHRHSAGMLRGGSVGSNLADLGR
        MD K+E R +  PN++  + NK +    E +LED K+ +H    SP +++P    S + + NCLCSPTTHVGSFRCR HR S GMLRGGSVGSNLADLGR
Subjt:  MDHKVEHR-APRPNHRN-NFNKQRA-FSEFDLEDLKR-SHRHSASPSSQSPPHKASPAAKRNCLCSPTTHVGSFRCRRHRHSAGMLRGGSVGSNLADLGR

Query:  KSDQI
        KS  I
Subjt:  KSDQI

KAG6607735.1 hypothetical protein SDJN03_01077, partial [Cucurbita argyrosperma subsp. sororia]1.7e-2765.38Show/hide
Query:  MDHKVEHRAPRPNHRNNFNKQR--AFSEFDLEDLKRSHRHSASPSSQSPPHKASPAAKRNCLCSPTTHVGSFRCRRHRHSAGMLRGGSVGSNLADLGRKS
        MDHK +HRAPRP HR++ +      F++FDLEDLKRS R   SPS  S P K SPAAK +CLCSPTTH+GSFRCR HR SAG+LRGGSVGSNL+DL RKS
Subjt:  MDHKVEHRAPRPNHRNNFNKQR--AFSEFDLEDLKRSHRHSASPSSQSPPHKASPAAKRNCLCSPTTHVGSFRCRRHRHSAGMLRGGSVGSNLADLGRKS

Query:  DQII
         + +
Subjt:  DQII

KAG7024984.1 hypothetical protein SDJN02_13804, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-2057.66Show/hide
Query:  MDHKVEHRAPRPNHRNNFN--KQRAFSEFDLEDLKRSHRHSASPSSQSPPHKASPAAKRNCLCSPTTHVGSFRCRRHRHSAGMLRGGSVGSNLADLGRKS
        MDHK +HRAPRP  RNN N   +  F++FDLED K+     AS  S+S   KA  +AK +CLCSPTTH+GSFRCR HRH+ GMLRG SVGSNL++L  KS
Subjt:  MDHKVEHRAPRPNHRNNFN--KQRAFSEFDLEDLKRSHRHSASPSSQSPPHKASPAAKRNCLCSPTTHVGSFRCRRHRHSAGMLRGGSVGSNLADLGRKS

Query:  DQIIESSSYSP
          ++  +SYSP
Subjt:  DQIIESSSYSP

KGN44385.1 hypothetical protein Csa_015645 [Cucumis sativus]8.1e-2255.83Show/hide
Query:  MDHKVEHRAPRPNHRNNFNK----------QRAFSEFDLEDLKRSHRHSASPSSQSPPHKASP-AAKRNCLCSPTTHVGSFRCRRHRHSAGMLRGGSVGS
        MD+K +HRAPRPN RNN N           + AF++ +LEDLK++ R   SPS  S     +P +AK NCLCSPTTH+GSFRCR HRHS GM+RGGSVGS
Subjt:  MDHKVEHRAPRPNHRNNFNK----------QRAFSEFDLEDLKRSHRHSASPSSQSPPHKASP-AAKRNCLCSPTTHVGSFRCRRHRHSAGMLRGGSVGS

Query:  NLADLGRKSDQIIESSSYSP
        NL+DL RK  +I+   S+SP
Subjt:  NLADLGRKSDQIIESSSYSP

TrEMBL top hitse value%identityAlignment
A0A0A0K3W3 Uncharacterized protein3.9e-2255.83Show/hide
Query:  MDHKVEHRAPRPNHRNNFNK----------QRAFSEFDLEDLKRSHRHSASPSSQSPPHKASP-AAKRNCLCSPTTHVGSFRCRRHRHSAGMLRGGSVGS
        MD+K +HRAPRPN RNN N           + AF++ +LEDLK++ R   SPS  S     +P +AK NCLCSPTTH+GSFRCR HRHS GM+RGGSVGS
Subjt:  MDHKVEHRAPRPNHRNNFNK----------QRAFSEFDLEDLKRSHRHSASPSSQSPPHKASP-AAKRNCLCSPTTHVGSFRCRRHRHSAGMLRGGSVGS

Query:  NLADLGRKSDQIIESSSYSP
        NL+DL RK  +I+   S+SP
Subjt:  NLADLGRKSDQIIESSSYSP

A0A5A7TYF3 Putative PGPS/D10 protein2.1e-1560.49Show/hide
Query:  AFSEFDLEDLKRSHRH-SASPSSQSPPHKASPAAKRNCLCSPTTHVGSFRCRRHRHSAGMLRGGSVGSNLADLGRKSDQII
        A +E +L DLK ++ H   SPS  S   K   +AK NCLCSPTTH+GSFRCR HRH AGM+RGGSVGSNL+DL RK  +I+
Subjt:  AFSEFDLEDLKRSHRH-SASPSSQSPPHKASPAAKRNCLCSPTTHVGSFRCRRHRHSAGMLRGGSVGSNLADLGRKSDQII

A0A7J6EXD7 Uncharacterized protein5.2e-1456.99Show/hide
Query:  PNHRN-NFNKQRA-FSEFDLEDLKR-SHRHSASPSSQSPPHKASPAAKRNCLCSPTTHVGSFRCRRHRHSAGMLRGGSVGSNLADLGRKSDQI
        PN++  + NK +    E +LED K+ +H    SP +++P    S + + NCLCSPTTHVGSFRCR HR S GMLRGGSVGSNLADLGRKS  I
Subjt:  PNHRN-NFNKQRA-FSEFDLEDLKR-SHRHSASPSSQSPPHKASPAAKRNCLCSPTTHVGSFRCRRHRHSAGMLRGGSVGSNLADLGRKSDQI

A0A7J6H8T3 Uncharacterized protein3.6e-1555.24Show/hide
Query:  MDHKVEHR-APRPNHRN-NFNKQRA-FSEFDLEDLKR-SHRHSASPSSQSPPHKASPAAKRNCLCSPTTHVGSFRCRRHRHSAGMLRGGSVGSNLADLGR
        MD K+E R +  PN++  + NK +    E +LED K+ +H    SP +++P    S + + NCLCSPTTHVGSFRCR HR S GMLRGGSVGSNLADLGR
Subjt:  MDHKVEHR-APRPNHRN-NFNKQRA-FSEFDLEDLKR-SHRHSASPSSQSPPHKASPAAKRNCLCSPTTHVGSFRCRRHRHSAGMLRGGSVGSNLADLGR

Query:  KSDQI
        KS  I
Subjt:  KSDQI

W9SBP1 Uncharacterized protein1.4e-1450.96Show/hide
Query:  MDHKVEHRAPRPNHRNNFNKQRAFSEFDLEDLKRSHRHSASPSSQSPPHKASPAAKRNCLCSPTTHVGSFRCRRHRHSAGMLRGGSVGSNLADLGRKSDQ
        MD KVE R+P+    NN N +    + +L +LK+     ASP +Q    K+S + + NCLCSPTTH GSFRCR HR S  MLRGGSVGSNL++L RK   
Subjt:  MDHKVEHRAPRPNHRNNFNKQRAFSEFDLEDLKRSHRHSASPSSQSPPHKASPAAKRNCLCSPTTHVGSFRCRRHRHSAGMLRGGSVGSNLADLGRKSDQ

Query:  IIES
        I +S
Subjt:  IIES

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G67910.1 unknown protein4.8e-0452.38Show/hide
Query:  SHRHSASPSSQSPPHKASPAAKRNCLCSPTTHVGSFRCRRHR
        SH +SA         + +   K NCLCSPTTH GSFRCR HR
Subjt:  SHRHSASPSSQSPPHKASPAAKRNCLCSPTTHVGSFRCRRHR

AT3G13227.1 serine-rich protein-related9.3e-0845.33Show/hide
Query:  EDLKRSHRHSASP--------SSQSPPHKASPAAKRNCLCSPTTHVGSFRCRRHRHSA--GMLRGGSVGSNLADL
        +D+KR   ++ SP           S     S + ++NCLC+PTTH GSFRCR HR +A  GM RG SV SNL+ L
Subjt:  EDLKRSHRHSASP--------SSQSPPHKASPAAKRNCLCSPTTHVGSFRCRRHRHSA--GMLRGGSVGSNLADL

AT5G25280.1 serine-rich protein-related1.3e-0436.36Show/hide
Query:  EHRAPRPNHRNNFNKQRAFSEF--DLEDLKRSHRHSASPSSQSPP-HKASPAAKRNCLCSPTTHVGSFRCRRHRHSA
        +HR+  P   N F        F   +++   S   S + SS  P  H   P ++R C+CSPTTH GSFRC  H++ A
Subjt:  EHRAPRPNHRNNFNKQRAFSEF--DLEDLKRSHRHSASPSSQSPP-HKASPAAKRNCLCSPTTHVGSFRCRRHRHSA

AT5G25280.2 serine-rich protein-related1.3e-0436.36Show/hide
Query:  EHRAPRPNHRNNFNKQRAFSEF--DLEDLKRSHRHSASPSSQSPP-HKASPAAKRNCLCSPTTHVGSFRCRRHRHSA
        +HR+  P   N F        F   +++   S   S + SS  P  H   P ++R C+CSPTTH GSFRC  H++ A
Subjt:  EHRAPRPNHRNNFNKQRAFSEF--DLEDLKRSHRHSASPSSQSPP-HKASPAAKRNCLCSPTTHVGSFRCRRHRHSA

AT5G55980.1 serine-rich protein-related7.1e-0849.23Show/hide
Query:  SPSSQSPPHKASPAAKRNCLCSPTTHVGSFRCRRHRHSAGMLRGGSVGSNLAD-LGRKSDQIIES
        SPS +     +  + + NCLCSPTTH GSFRCR HR  + + R GS+GSNLA  L  KS +  +S
Subjt:  SPSSQSPPHKASPAAKRNCLCSPTTHVGSFRCRRHRHSAGMLRGGSVGSNLAD-LGRKSDQIIES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCACAAAGTAGAACACAGAGCCCCAAGGCCAAACCACAGAAACAATTTCAACAAACAAAGAGCATTCTCAGAATTCGACTTAGAGGATTTGAAGCGGAGCCACCG
CCACTCGGCCTCTCCGTCGTCGCAGTCGCCGCCGCACAAGGCCTCCCCGGCGGCCAAGAGGAACTGTCTCTGCTCTCCGACCACTCACGTCGGCTCGTTCCGGTGCCGGC
GCCACCGCCACTCCGCCGGCATGCTCCGCGGCGGATCCGTCGGCTCCAACCTCGCCGATTTGGGCCGTAAGTCGGATCAGATCATAGAATCTTCTTCGTATTCGCCTTGA
mRNA sequenceShow/hide mRNA sequence
CCCTTCTCTCATTTTCCTTCAAACCAAAAACAAAAACCAACATTTCCCCCCCCAAAAAGAACCCTAATTCCAATTCCAAATCCAAATCCAAATTTTGTTATCTAAGATTC
ATAATCAGAAATCCATGGATCACAAAGTAGAACACAGAGCCCCAAGGCCAAACCACAGAAACAATTTCAACAAACAAAGAGCATTCTCAGAATTCGACTTAGAGGATTTG
AAGCGGAGCCACCGCCACTCGGCCTCTCCGTCGTCGCAGTCGCCGCCGCACAAGGCCTCCCCGGCGGCCAAGAGGAACTGTCTCTGCTCTCCGACCACTCACGTCGGCTC
GTTCCGGTGCCGGCGCCACCGCCACTCCGCCGGCATGCTCCGCGGCGGATCCGTCGGCTCCAACCTCGCCGATTTGGGCCGTAAGTCGGATCAGATCATAGAATCTTCTT
CGTATTCGCCTTGAATCTCGTTTTCTCGCTTGATTGATTGTTTGTTCGTTTGTGTTCTTATTGTTGAGACTGTTTTTGTATCGGAAAATTTGTGGGAATGAAACAGGATT
TCGTGATTTCTACGGTGAATTGTCTGCTGCTGATTTGTAAAGGAAGATGACGAATCCGCT
Protein sequenceShow/hide protein sequence
MDHKVEHRAPRPNHRNNFNKQRAFSEFDLEDLKRSHRHSASPSSQSPPHKASPAAKRNCLCSPTTHVGSFRCRRHRHSAGMLRGGSVGSNLADLGRKSDQIIESSSYSP