CuGenDBv2

Gene ID	Sed0023269
Organism	Sechium edule (Chayote v1)
Description	pre-mRNA-splicing factor CWC22 homolog
Genome location	LG13:2186483..2187999
RNA-Seq Expression	Sed0023269
Synteny	Sed0023269
Gene Ontology terms	GO:0000398 - mRNA splicing, via spliceosome (biological process) GO:0006417 - regulation of translation (biological process) GO:0071013 - catalytic step 2 spliceosome (cellular component) GO:0003723 - RNA binding (molecular function) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR003890 - MIF4G-like, type 3 IPR003891 - Initiation factor eIF-4 gamma, MA3 IPR016021 - MIF4G-like domain superfamily IPR016024 - Armadillo-type fold

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6588511.1 Pre-mRNA-splicing factor CWC22-like protein, partial [Cucurbita argyrosperma subsp. sororia]

1.7e-204

78.7

Show/hide

Query:  MKSQMASPRFTDVFAALVAVVNTKFPEIGDLLLRRIVLQLKRAYKRNDKPRLLAAVKFIAHLVNQQVAHEIIALELLAVLLENPTDDSVEVVVGFVTECG
        MKSQMASP FTDVFAALV+VVNTKFPE+GDLLLRRIVLQLKRAYKRNDKP+LLAAVKFIAHLVNQQVAHEIIALELL VLLENPTDDSVEV VGFVTECG
Subjt:  MKSQMASPRFTDVFAALVAVVNTKFPEIGDLLLRRIVLQLKRAYKRNDKPRLLAAVKFIAHLVNQQVAHEIIALELLAVLLENPTDDSVEVVVGFVTECG

Query:  SMLQSCTPRGLHGIFERFRGILREGEIDKRVRFLIEGLFAIRKAKFKDYPAFRPELDLVELGDQVTHEISLQEEIDPVIALDIFKTDSNFLESEKCYEDL
        S+LQ  +P+GLHGIFERFRGIL EGEIDKRV+FLIEGLFAIRKAKF+ YPA RPELDLVE  DQ+THEISLQEEIDP IALDIFK+D NFLE+EK YEDL
Subjt:  SMLQSCTPRGLHGIFERFRGILREGEIDKRVRFLIEGLFAIRKAKFKDYPAFRPELDLVELGDQVTHEISLQEEIDPVIALDIFKTDSNFLESEKCYEDL

Query:  KKNILGEESEDEEDRFDVGSD--EDEEEEDEYEKEDQQHMEINDETETNLVSLRRTIYLTIMS--------------------KIELCFMLLECCTHERT
        KKNILGEESEDE+DR D GSD  EDE+EE++ E+ED++ M+INDETETNLV+LRRTIYLTIMS                    +IELC MLLECC+ ERT
Subjt:  KKNILGEESEDEEDRFDVGSD--EDEEEEDEYEKEDQQHMEINDETETNLVSLRRTIYLTIMS--------------------KIELCFMLLECCTHERT

Query:  YLQYYGLLGQRFCKINKVHQPNFEKCFVQQYSMIHRLETDKLKNVAKFFAHLFSNDALSWHVLSYISLSEEDTTSSSRIY----------HLGIRLLNER
        YL+YYGLLGQRFCKINKVHQ NFEKCFVQQYSMIHRLET+KL+NVAKFFAHL   DAL WHVLSYI L+EEDTTSSSRI+          HLGIRLLNER
Subjt:  YLQYYGLLGQRFCKINKVHQPNFEKCFVQQYSMIHRLETDKLKNVAKFFAHLFSNDALSWHVLSYISLSEEDTTSSSRIY----------HLGIRLLNER

Query:  LTDPTMQVSFESIFSKDNPNNTRFAINFFMSIGLGGLTENLRAYLKNMPRLIVRQLKPVLDFDVESRSFDSSGSDSSAFESESDRSSSEESEGKDTRRAK
        L DPTMQ SFESIF +DNP NTRF+INFF SIGLGGLTENLR YLKNMPRLI++Q KPV D D ES S DSSGSDSS  +SESD SSSEESEG+D RR K
Subjt:  LTDPTMQVSFESIFSKDNPNNTRFAINFFMSIGLGGLTENLRAYLKNMPRLIVRQLKPVLDFDVESRSFDSSGSDSSAFESESDRSSSEESEGKDTRRAK

Query:  KRRKTRR
        KRRKT R
Subjt:  KRRKTRR

KAG7022341.1 Pre-mRNA-splicing factor CWC22-like protein [Cucurbita argyrosperma subsp. argyrosperma]

1.7e-204

78.7

Show/hide

Query:  MKSQMASPRFTDVFAALVAVVNTKFPEIGDLLLRRIVLQLKRAYKRNDKPRLLAAVKFIAHLVNQQVAHEIIALELLAVLLENPTDDSVEVVVGFVTECG
        MKSQMASP FTDVFAALV+VVNTKFPE+GDLLLRRIVLQLKRAYKRNDKP+LLAAVKFIAHLVNQQVAHEIIALELL VLLENPTDDSVEV VGFVTECG
Subjt:  MKSQMASPRFTDVFAALVAVVNTKFPEIGDLLLRRIVLQLKRAYKRNDKPRLLAAVKFIAHLVNQQVAHEIIALELLAVLLENPTDDSVEVVVGFVTECG

Query:  SMLQSCTPRGLHGIFERFRGILREGEIDKRVRFLIEGLFAIRKAKFKDYPAFRPELDLVELGDQVTHEISLQEEIDPVIALDIFKTDSNFLESEKCYEDL
        S+LQ  +P+GLHGIFERFRGIL EGEIDKRV+FLIEGLFAIRKAKF+ YPA RPELDLVE  DQ+THEISLQEEIDP IALDIFK+D NFLE+EK YEDL
Subjt:  SMLQSCTPRGLHGIFERFRGILREGEIDKRVRFLIEGLFAIRKAKFKDYPAFRPELDLVELGDQVTHEISLQEEIDPVIALDIFKTDSNFLESEKCYEDL

Query:  KKNILGEESEDEEDRFDVGSD--EDEEEEDEYEKEDQQHMEINDETETNLVSLRRTIYLTIMS--------------------KIELCFMLLECCTHERT
        KKNILGEESEDE+DR D GSD  EDE+EE++ E+ED++ M+INDETETNLV+LRRTIYLTIMS                    +IELC MLLECC+ ERT
Subjt:  KKNILGEESEDEEDRFDVGSD--EDEEEEDEYEKEDQQHMEINDETETNLVSLRRTIYLTIMS--------------------KIELCFMLLECCTHERT

Query:  YLQYYGLLGQRFCKINKVHQPNFEKCFVQQYSMIHRLETDKLKNVAKFFAHLFSNDALSWHVLSYISLSEEDTTSSSRIY----------HLGIRLLNER
        YL+YYGLLGQRFCKINKVHQ NFEKCFVQQYSMIHRLET+KL+NVAKFFAHL   DAL WHVLSYI L+EEDTTSSSRI+          HLGIRLLNER
Subjt:  YLQYYGLLGQRFCKINKVHQPNFEKCFVQQYSMIHRLETDKLKNVAKFFAHLFSNDALSWHVLSYISLSEEDTTSSSRIY----------HLGIRLLNER

Query:  LTDPTMQVSFESIFSKDNPNNTRFAINFFMSIGLGGLTENLRAYLKNMPRLIVRQLKPVLDFDVESRSFDSSGSDSSAFESESDRSSSEESEGKDTRRAK
        L DPTMQ SFESIF +DNP NTRF+INFF SIGLGGLTENLR YLKNMPRLI++Q KPV D D ES S DSSGSDSS  +SESD SSSEESEG+D RR K
Subjt:  LTDPTMQVSFESIFSKDNPNNTRFAINFFMSIGLGGLTENLRAYLKNMPRLIVRQLKPVLDFDVESRSFDSSGSDSSAFESESDRSSSEESEGKDTRRAK

Query:  KRRKTRR
        KRRKT R
Subjt:  KRRKTRR

XP_022928022.1 pre-mRNA-splicing factor CWC22 homolog [Cucurbita moschata]

3.7e-204

78.7

Show/hide

Query:  MKSQMASPRFTDVFAALVAVVNTKFPEIGDLLLRRIVLQLKRAYKRNDKPRLLAAVKFIAHLVNQQVAHEIIALELLAVLLENPTDDSVEVVVGFVTECG
        MKSQMASP FTDVFAALV+VVNTKFPE+GDLLLRRIVLQLKRAYKRNDKP+LLAAVKFIAHLVNQQVAHEIIALELL VLLENPTD+SVEV VGFVTECG
Subjt:  MKSQMASPRFTDVFAALVAVVNTKFPEIGDLLLRRIVLQLKRAYKRNDKPRLLAAVKFIAHLVNQQVAHEIIALELLAVLLENPTDDSVEVVVGFVTECG

Query:  SMLQSCTPRGLHGIFERFRGILREGEIDKRVRFLIEGLFAIRKAKFKDYPAFRPELDLVELGDQVTHEISLQEEIDPVIALDIFKTDSNFLESEKCYEDL
        S+LQ  +P+GLHGIFERFRGIL EGEIDKRV+FLIEGLFAIRKAKF+ YPA RPELDLVE  DQ+THEISLQEEIDP IALDIFK+D NFLE+EK YEDL
Subjt:  SMLQSCTPRGLHGIFERFRGILREGEIDKRVRFLIEGLFAIRKAKFKDYPAFRPELDLVELGDQVTHEISLQEEIDPVIALDIFKTDSNFLESEKCYEDL

Query:  KKNILGEESEDEEDRFDVGSD--EDEEEEDEYEKEDQQHMEINDETETNLVSLRRTIYLTIMS--------------------KIELCFMLLECCTHERT
        KKNILGEESEDEEDR D GSD  EDE+EE++ E+ED++ M+INDETETNLV+LRRTIYLTIMS                    +IELC MLLECC+ ERT
Subjt:  KKNILGEESEDEEDRFDVGSD--EDEEEEDEYEKEDQQHMEINDETETNLVSLRRTIYLTIMS--------------------KIELCFMLLECCTHERT

Query:  YLQYYGLLGQRFCKINKVHQPNFEKCFVQQYSMIHRLETDKLKNVAKFFAHLFSNDALSWHVLSYISLSEEDTTSSSRIY----------HLGIRLLNER
        YL+YYGLLGQRFCKINKVHQ NFEKCFVQQYSMIHRLET+KL+NVAKFFAHL   DAL WHVLSYI L+EEDTTSSSRI+          HLGIRLLNER
Subjt:  YLQYYGLLGQRFCKINKVHQPNFEKCFVQQYSMIHRLETDKLKNVAKFFAHLFSNDALSWHVLSYISLSEEDTTSSSRIY----------HLGIRLLNER

Query:  LTDPTMQVSFESIFSKDNPNNTRFAINFFMSIGLGGLTENLRAYLKNMPRLIVRQLKPVLDFDVESRSFDSSGSDSSAFESESDRSSSEESEGKDTRRAK
        L DPTMQ SFESIF +DNP NTRF+INFF SIGLGGLTENLR YLKNMPRLI++Q KPV D D ES S DSSGSDSS  +SESD SSSEESEG+D RR K
Subjt:  LTDPTMQVSFESIFSKDNPNNTRFAINFFMSIGLGGLTENLRAYLKNMPRLIVRQLKPVLDFDVESRSFDSSGSDSSAFESESDRSSSEESEGKDTRRAK

Query:  KRRKTRR
        KRRKT R
Subjt:  KRRKTRR

XP_022969283.1 pre-mRNA-splicing factor CWC22 homolog [Cucurbita maxima]

1.7e-204

78.7

Show/hide

Query:  MKSQMASPRFTDVFAALVAVVNTKFPEIGDLLLRRIVLQLKRAYKRNDKPRLLAAVKFIAHLVNQQVAHEIIALELLAVLLENPTDDSVEVVVGFVTECG
        MKSQMASP FTDVFAALV+VVNTKFPE+GDLLLRRIVLQLKRAYKRNDKP+LLAAVKFIAHLVNQQVAHEIIALELL VLLENPTDDSVEV VGFVTECG
Subjt:  MKSQMASPRFTDVFAALVAVVNTKFPEIGDLLLRRIVLQLKRAYKRNDKPRLLAAVKFIAHLVNQQVAHEIIALELLAVLLENPTDDSVEVVVGFVTECG

Query:  SMLQSCTPRGLHGIFERFRGILREGEIDKRVRFLIEGLFAIRKAKFKDYPAFRPELDLVELGDQVTHEISLQEEIDPVIALDIFKTDSNFLESEKCYEDL
        S+LQ  +P+GLHGIFERFRGIL EGEIDKRV+FLIEGLFAIRKAKF+ YPA RPELDLVE  DQ+THE+SLQEEIDP IALDIFK+D NFLE+EK YEDL
Subjt:  SMLQSCTPRGLHGIFERFRGILREGEIDKRVRFLIEGLFAIRKAKFKDYPAFRPELDLVELGDQVTHEISLQEEIDPVIALDIFKTDSNFLESEKCYEDL

Query:  KKNILGEESEDEEDRFDVGSD--EDEEEEDEYEKEDQQHMEINDETETNLVSLRRTIYLTIMS--------------------KIELCFMLLECCTHERT
        KKNILGEESEDEEDR D GSD  EDE+EE++ E+ED++ M+INDETETNLV+LRRTIYLTIMS                    +IELC MLLECC+ ERT
Subjt:  KKNILGEESEDEEDRFDVGSD--EDEEEEDEYEKEDQQHMEINDETETNLVSLRRTIYLTIMS--------------------KIELCFMLLECCTHERT

Query:  YLQYYGLLGQRFCKINKVHQPNFEKCFVQQYSMIHRLETDKLKNVAKFFAHLFSNDALSWHVLSYISLSEEDTTSSSRIY----------HLGIRLLNER
        YL+YYGLLGQRFCKINKVHQ NFEKCFVQQYSMIHRLET+KL+NVAKFFAHL   DAL WHVLSYI L+EEDTTSSSRI+          HLGIRLLNER
Subjt:  YLQYYGLLGQRFCKINKVHQPNFEKCFVQQYSMIHRLETDKLKNVAKFFAHLFSNDALSWHVLSYISLSEEDTTSSSRIY----------HLGIRLLNER

Query:  LTDPTMQVSFESIFSKDNPNNTRFAINFFMSIGLGGLTENLRAYLKNMPRLIVRQLKPVLDFDVESRSFDSSGSDSSAFESESDRSSSEESEGKDTRRAK
        L DPTMQ SFESIF +DNP NTRF+INFF SIGLGGLTENLR YLKNMPRLI++Q KPV D D ES S DSSGSDSS  +SESD SSSEESEG+D RR K
Subjt:  LTDPTMQVSFESIFSKDNPNNTRFAINFFMSIGLGGLTENLRAYLKNMPRLIVRQLKPVLDFDVESRSFDSSGSDSSAFESESDRSSSEESEGKDTRRAK

Query:  KRRKTRR
        KRRKT R
Subjt:  KRRKTRR

XP_023530862.1 pre-mRNA-splicing factor CWC22 homolog [Cucurbita pepo subsp. pepo]

1.8e-203

78.26

Show/hide

Query:  MKSQMASPRFTDVFAALVAVVNTKFPEIGDLLLRRIVLQLKRAYKRNDKPRLLAAVKFIAHLVNQQVAHEIIALELLAVLLENPTDDSVEVVVGFVTECG
        MKSQMASP FTDVFAALV+VVNTKFPE+GDLLLRRIVLQLKRAYKRNDKP+LLAAVKFIAHLVNQQVAHEIIALELL VLLENPTDDSVEV VGFVTECG
Subjt:  MKSQMASPRFTDVFAALVAVVNTKFPEIGDLLLRRIVLQLKRAYKRNDKPRLLAAVKFIAHLVNQQVAHEIIALELLAVLLENPTDDSVEVVVGFVTECG

Query:  SMLQSCTPRGLHGIFERFRGILREGEIDKRVRFLIEGLFAIRKAKFKDYPAFRPELDLVELGDQVTHEISLQEEIDPVIALDIFKTDSNFLESEKCYEDL
        S+LQ  +P+GLHGIFERFRGIL EGEIDKRV+FLIEGLFAIRKAKF+ YPA RPELDLVE  DQ+THEISLQEEIDP IALDIFK+D NFLE+EK YEDL
Subjt:  SMLQSCTPRGLHGIFERFRGILREGEIDKRVRFLIEGLFAIRKAKFKDYPAFRPELDLVELGDQVTHEISLQEEIDPVIALDIFKTDSNFLESEKCYEDL

Query:  KKNILGEESEDEEDRFDVGSDEDEEEEDEYE-KEDQQHMEINDETETNLVSLRRTIYLTIMS--------------------KIELCFMLLECCTHERTY
        KKNILGEESEDEEDR D GSD++E+E++E + +ED++ M+INDETETNLV+LRRTIYLTIMS                    +IELC MLLECC+ ERTY
Subjt:  KKNILGEESEDEEDRFDVGSDEDEEEEDEYE-KEDQQHMEINDETETNLVSLRRTIYLTIMS--------------------KIELCFMLLECCTHERTY

Query:  LQYYGLLGQRFCKINKVHQPNFEKCFVQQYSMIHRLETDKLKNVAKFFAHLFSNDALSWHVLSYISLSEEDTTSSSRIY----------HLGIRLLNERL
        L+YYGLLGQRFCKINKVHQ NFEKCFVQQYSMIHRLET+KL+NVAKFFAHL   DAL WHVLSYI L+EEDTTSSSRI+          HLGIRLLNERL
Subjt:  LQYYGLLGQRFCKINKVHQPNFEKCFVQQYSMIHRLETDKLKNVAKFFAHLFSNDALSWHVLSYISLSEEDTTSSSRIY----------HLGIRLLNERL

Query:  TDPTMQVSFESIFSKDNPNNTRFAINFFMSIGLGGLTENLRAYLKNMPRLIVRQLKPVLDFDVESRSFDSSGSDSSAFESESDRSSSEESEGKDTRRAKK
         DPTMQ SFESIF +DNP NTRF+INFF SIGLGGLTENLR YLKNMPRLI++Q KPV D D ES S DSSGSDSS  +SESD SSS+ESEG+D RR KK
Subjt:  TDPTMQVSFESIFSKDNPNNTRFAINFFMSIGLGGLTENLRAYLKNMPRLIVRQLKPVLDFDVESRSFDSSGSDSSAFESESDRSSSEESEGKDTRRAKK

Query:  RRKTRR
        RRKT R
Subjt:  RRKTRR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L1Y4 MI domain-containing protein

6.4e-202

78.11

Show/hide

Query:  MKSQMASPRFTDVFAALVAVVNTKFPEIGDLLLRRIVLQLKRAYKRNDKPRLLAAVKFIAHLVNQQVAHEIIALELLAVLLENPTDDSVEVVVGFVTECG
        MKSQMASP FTDVFAALVAVVNTKFPE+GDLLLRRIVLQLKRAYKRNDKP+LLAAVKFIAHLVNQQVAHEIIALELL VLLENPTDDSVEV VGFVTECG
Subjt:  MKSQMASPRFTDVFAALVAVVNTKFPEIGDLLLRRIVLQLKRAYKRNDKPRLLAAVKFIAHLVNQQVAHEIIALELLAVLLENPTDDSVEVVVGFVTECG

Query:  SMLQSCTPRGLHGIFERFRGILREGEIDKRVRFLIEGLFAIRKAKFKDYPAFRPELDLVELGDQVTHEISLQEEIDPVIALDIFKTDSNFLESEKCYEDL
        S+L+  +P+GLHGIFERFRGIL EGEIDKRV+FLIEGLFAIRKAKF+ YPA RPELDLVE  DQ+THEISLQEEIDP I LDIFK+D NFLE+EK YEDL
Subjt:  SMLQSCTPRGLHGIFERFRGILREGEIDKRVRFLIEGLFAIRKAKFKDYPAFRPELDLVELGDQVTHEISLQEEIDPVIALDIFKTDSNFLESEKCYEDL

Query:  KKNILGEESEDEEDRFDVGSD--EDEEEEDEYEKEDQQHMEINDETETNLVSLRRTIYLTIMS--------------------KIELCFMLLECCTHERT
        KKNILGEESEDEEDR D GSD  EDE+EEDE E+ED++ M+INDETETNLV+LRRTIYLTIMS                    +IELC MLLECC+ ERT
Subjt:  KKNILGEESEDEEDRFDVGSD--EDEEEEDEYEKEDQQHMEINDETETNLVSLRRTIYLTIMS--------------------KIELCFMLLECCTHERT

Query:  YLQYYGLLGQRFCKINKVHQPNFEKCFVQQYSMIHRLETDKLKNVAKFFAHLFSNDALSWHVLSYISLSEEDTTSSSRIY----------HLGIRLLNER
        YL+YYGLLGQRFCKINKV+Q NF+KCFVQQYSMIHRLET+KL+NVAKFFAHL   DAL WHVLSYI L+EEDTTSSSRI+          HLGIRLLNER
Subjt:  YLQYYGLLGQRFCKINKVHQPNFEKCFVQQYSMIHRLETDKLKNVAKFFAHLFSNDALSWHVLSYISLSEEDTTSSSRIY----------HLGIRLLNER

Query:  LTDPTMQVSFESIFSKDNPNNTRFAINFFMSIGLGGLTENLRAYLKNMPRLIVRQLKPVLDFDVESRSFDSSGSDSSAFESESDRSSSEESEGKDTRRAK
        LTDPTMQ SFESIF +DNP NTRF+INFF SIGLGGLTENLR YLKNMPRLI++Q KPV D D ES+S DSS SDSS+ ES+SD   SE+SE +D RR K
Subjt:  LTDPTMQVSFESIFSKDNPNNTRFAINFFMSIGLGGLTENLRAYLKNMPRLIVRQLKPVLDFDVESRSFDSSGSDSSAFESESDRSSSEESEGKDTRRAK

Query:  KRRKTRR
        KRRKTRR
Subjt:  KRRKTRR

A0A1S3BND2 pre-mRNA-splicing factor CWC22 homolog isoform X1

4.4e-203

78.5

Show/hide

Query:  MKSQMASPRFTDVFAALVAVVNTKFPEIGDLLLRRIVLQLKRAYKRNDKPRLLAAVKFIAHLVNQQVAHEIIALELLAVLLENPTDDSVEVVVGFVTECG
        MKSQMASP FTDVFAALVAVVNTKFPE+GDLLLRRIVLQLKRAYKRNDKP+LLAAVKFIAHLVNQQVAHEIIALELL VLLENPTDDSVEV VGFVTECG
Subjt:  MKSQMASPRFTDVFAALVAVVNTKFPEIGDLLLRRIVLQLKRAYKRNDKPRLLAAVKFIAHLVNQQVAHEIIALELLAVLLENPTDDSVEVVVGFVTECG

Query:  SMLQSCTPRGLHGIFERFRGILREGEIDKRVRFLIEGLFAIRKAKFKDYPAFRPELDLVELGDQVTHEISLQEEIDPVIALDIFKTDSNFLESEKCYEDL
        S+L+  +P+GLHGIFERFRGIL EGEIDKRV+FLIEGLFAIRKAKF+ YPA RPELDLVE  DQ+THEISLQEEIDP I LDIFK+D NFLE+EK YEDL
Subjt:  SMLQSCTPRGLHGIFERFRGILREGEIDKRVRFLIEGLFAIRKAKFKDYPAFRPELDLVELGDQVTHEISLQEEIDPVIALDIFKTDSNFLESEKCYEDL

Query:  KKNILGEESEDEEDRFDVGSD--EDEEEEDEYEKEDQQHMEINDETETNLVSLRRTIYLTIMS--------------------KIELCFMLLECCTHERT
        KKNILGEESEDEEDR D GSD  EDE+EEDE E+ED++ M+INDETETNLV+LRRTIYLTIMS                    +IELC MLLECC+ ERT
Subjt:  KKNILGEESEDEEDRFDVGSD--EDEEEEDEYEKEDQQHMEINDETETNLVSLRRTIYLTIMS--------------------KIELCFMLLECCTHERT

Query:  YLQYYGLLGQRFCKINKVHQPNFEKCFVQQYSMIHRLETDKLKNVAKFFAHLFSNDALSWHVLSYISLSEEDTTSSSRIY----------HLGIRLLNER
        YL+YYGLLGQRFCKINKV+Q NFEKCFVQQYSMIHRLET+KL+NVAKFFAHL   DAL WHVLSYI L+EEDTTSSSRI+          HLGIRLLNER
Subjt:  YLQYYGLLGQRFCKINKVHQPNFEKCFVQQYSMIHRLETDKLKNVAKFFAHLFSNDALSWHVLSYISLSEEDTTSSSRIY----------HLGIRLLNER

Query:  LTDPTMQVSFESIFSKDNPNNTRFAINFFMSIGLGGLTENLRAYLKNMPRLIVRQLKPVLDFDVESRSFDSSGSDSSAFESESDRSSSEESEGKDTRRAK
        LTDPTMQ SFESIF +DNP NTRF+INFF SIGLGGLTENLR YLKNMPRLI++Q KPV D D ES+S DSS SDSS+ ESESD   SE+ E KD RR K
Subjt:  LTDPTMQVSFESIFSKDNPNNTRFAINFFMSIGLGGLTENLRAYLKNMPRLIVRQLKPVLDFDVESRSFDSSGSDSSAFESESDRSSSEESEGKDTRRAK

Query:  KRRKTRR
        KRRKTRR
Subjt:  KRRKTRR

A0A1S3BNN3 pre-mRNA-splicing factor CWC22 homolog isoform X2

4.4e-203

78.5

Show/hide

Query:  MKSQMASPRFTDVFAALVAVVNTKFPEIGDLLLRRIVLQLKRAYKRNDKPRLLAAVKFIAHLVNQQVAHEIIALELLAVLLENPTDDSVEVVVGFVTECG
        MKSQMASP FTDVFAALVAVVNTKFPE+GDLLLRRIVLQLKRAYKRNDKP+LLAAVKFIAHLVNQQVAHEIIALELL VLLENPTDDSVEV VGFVTECG
Subjt:  MKSQMASPRFTDVFAALVAVVNTKFPEIGDLLLRRIVLQLKRAYKRNDKPRLLAAVKFIAHLVNQQVAHEIIALELLAVLLENPTDDSVEVVVGFVTECG

Query:  SMLQSCTPRGLHGIFERFRGILREGEIDKRVRFLIEGLFAIRKAKFKDYPAFRPELDLVELGDQVTHEISLQEEIDPVIALDIFKTDSNFLESEKCYEDL
        S+L+  +P+GLHGIFERFRGIL EGEIDKRV+FLIEGLFAIRKAKF+ YPA RPELDLVE  DQ+THEISLQEEIDP I LDIFK+D NFLE+EK YEDL
Subjt:  SMLQSCTPRGLHGIFERFRGILREGEIDKRVRFLIEGLFAIRKAKFKDYPAFRPELDLVELGDQVTHEISLQEEIDPVIALDIFKTDSNFLESEKCYEDL

Query:  KKNILGEESEDEEDRFDVGSD--EDEEEEDEYEKEDQQHMEINDETETNLVSLRRTIYLTIMS--------------------KIELCFMLLECCTHERT
        KKNILGEESEDEEDR D GSD  EDE+EEDE E+ED++ M+INDETETNLV+LRRTIYLTIMS                    +IELC MLLECC+ ERT
Subjt:  KKNILGEESEDEEDRFDVGSD--EDEEEEDEYEKEDQQHMEINDETETNLVSLRRTIYLTIMS--------------------KIELCFMLLECCTHERT

Query:  YLQYYGLLGQRFCKINKVHQPNFEKCFVQQYSMIHRLETDKLKNVAKFFAHLFSNDALSWHVLSYISLSEEDTTSSSRIY----------HLGIRLLNER
        YL+YYGLLGQRFCKINKV+Q NFEKCFVQQYSMIHRLET+KL+NVAKFFAHL   DAL WHVLSYI L+EEDTTSSSRI+          HLGIRLLNER
Subjt:  YLQYYGLLGQRFCKINKVHQPNFEKCFVQQYSMIHRLETDKLKNVAKFFAHLFSNDALSWHVLSYISLSEEDTTSSSRIY----------HLGIRLLNER

Query:  LTDPTMQVSFESIFSKDNPNNTRFAINFFMSIGLGGLTENLRAYLKNMPRLIVRQLKPVLDFDVESRSFDSSGSDSSAFESESDRSSSEESEGKDTRRAK
        LTDPTMQ SFESIF +DNP NTRF+INFF SIGLGGLTENLR YLKNMPRLI++Q KPV D D ES+S DSS SDSS+ ESESD   SE+ E KD RR K
Subjt:  LTDPTMQVSFESIFSKDNPNNTRFAINFFMSIGLGGLTENLRAYLKNMPRLIVRQLKPVLDFDVESRSFDSSGSDSSAFESESDRSSSEESEGKDTRRAK

Query:  KRRKTRR
        KRRKTRR
Subjt:  KRRKTRR

A0A6J1EQK4 pre-mRNA-splicing factor CWC22 homolog

1.8e-204

78.7

Show/hide

Query:  MKSQMASPRFTDVFAALVAVVNTKFPEIGDLLLRRIVLQLKRAYKRNDKPRLLAAVKFIAHLVNQQVAHEIIALELLAVLLENPTDDSVEVVVGFVTECG
        MKSQMASP FTDVFAALV+VVNTKFPE+GDLLLRRIVLQLKRAYKRNDKP+LLAAVKFIAHLVNQQVAHEIIALELL VLLENPTD+SVEV VGFVTECG
Subjt:  MKSQMASPRFTDVFAALVAVVNTKFPEIGDLLLRRIVLQLKRAYKRNDKPRLLAAVKFIAHLVNQQVAHEIIALELLAVLLENPTDDSVEVVVGFVTECG

Query:  SMLQSCTPRGLHGIFERFRGILREGEIDKRVRFLIEGLFAIRKAKFKDYPAFRPELDLVELGDQVTHEISLQEEIDPVIALDIFKTDSNFLESEKCYEDL
        S+LQ  +P+GLHGIFERFRGIL EGEIDKRV+FLIEGLFAIRKAKF+ YPA RPELDLVE  DQ+THEISLQEEIDP IALDIFK+D NFLE+EK YEDL
Subjt:  SMLQSCTPRGLHGIFERFRGILREGEIDKRVRFLIEGLFAIRKAKFKDYPAFRPELDLVELGDQVTHEISLQEEIDPVIALDIFKTDSNFLESEKCYEDL

Query:  KKNILGEESEDEEDRFDVGSD--EDEEEEDEYEKEDQQHMEINDETETNLVSLRRTIYLTIMS--------------------KIELCFMLLECCTHERT
        KKNILGEESEDEEDR D GSD  EDE+EE++ E+ED++ M+INDETETNLV+LRRTIYLTIMS                    +IELC MLLECC+ ERT
Subjt:  KKNILGEESEDEEDRFDVGSD--EDEEEEDEYEKEDQQHMEINDETETNLVSLRRTIYLTIMS--------------------KIELCFMLLECCTHERT

Query:  YLQYYGLLGQRFCKINKVHQPNFEKCFVQQYSMIHRLETDKLKNVAKFFAHLFSNDALSWHVLSYISLSEEDTTSSSRIY----------HLGIRLLNER
        YL+YYGLLGQRFCKINKVHQ NFEKCFVQQYSMIHRLET+KL+NVAKFFAHL   DAL WHVLSYI L+EEDTTSSSRI+          HLGIRLLNER
Subjt:  YLQYYGLLGQRFCKINKVHQPNFEKCFVQQYSMIHRLETDKLKNVAKFFAHLFSNDALSWHVLSYISLSEEDTTSSSRIY----------HLGIRLLNER

Query:  LTDPTMQVSFESIFSKDNPNNTRFAINFFMSIGLGGLTENLRAYLKNMPRLIVRQLKPVLDFDVESRSFDSSGSDSSAFESESDRSSSEESEGKDTRRAK
        L DPTMQ SFESIF +DNP NTRF+INFF SIGLGGLTENLR YLKNMPRLI++Q KPV D D ES S DSSGSDSS  +SESD SSSEESEG+D RR K
Subjt:  LTDPTMQVSFESIFSKDNPNNTRFAINFFMSIGLGGLTENLRAYLKNMPRLIVRQLKPVLDFDVESRSFDSSGSDSSAFESESDRSSSEESEGKDTRRAK

Query:  KRRKTRR
        KRRKT R
Subjt:  KRRKTRR

A0A6J1I0I9 pre-mRNA-splicing factor CWC22 homolog

8.1e-205

78.7

Show/hide

Query:  MKSQMASPRFTDVFAALVAVVNTKFPEIGDLLLRRIVLQLKRAYKRNDKPRLLAAVKFIAHLVNQQVAHEIIALELLAVLLENPTDDSVEVVVGFVTECG
        MKSQMASP FTDVFAALV+VVNTKFPE+GDLLLRRIVLQLKRAYKRNDKP+LLAAVKFIAHLVNQQVAHEIIALELL VLLENPTDDSVEV VGFVTECG
Subjt:  MKSQMASPRFTDVFAALVAVVNTKFPEIGDLLLRRIVLQLKRAYKRNDKPRLLAAVKFIAHLVNQQVAHEIIALELLAVLLENPTDDSVEVVVGFVTECG

Query:  SMLQSCTPRGLHGIFERFRGILREGEIDKRVRFLIEGLFAIRKAKFKDYPAFRPELDLVELGDQVTHEISLQEEIDPVIALDIFKTDSNFLESEKCYEDL
        S+LQ  +P+GLHGIFERFRGIL EGEIDKRV+FLIEGLFAIRKAKF+ YPA RPELDLVE  DQ+THE+SLQEEIDP IALDIFK+D NFLE+EK YEDL
Subjt:  SMLQSCTPRGLHGIFERFRGILREGEIDKRVRFLIEGLFAIRKAKFKDYPAFRPELDLVELGDQVTHEISLQEEIDPVIALDIFKTDSNFLESEKCYEDL

Query:  KKNILGEESEDEEDRFDVGSD--EDEEEEDEYEKEDQQHMEINDETETNLVSLRRTIYLTIMS--------------------KIELCFMLLECCTHERT
        KKNILGEESEDEEDR D GSD  EDE+EE++ E+ED++ M+INDETETNLV+LRRTIYLTIMS                    +IELC MLLECC+ ERT
Subjt:  KKNILGEESEDEEDRFDVGSD--EDEEEEDEYEKEDQQHMEINDETETNLVSLRRTIYLTIMS--------------------KIELCFMLLECCTHERT

Query:  YLQYYGLLGQRFCKINKVHQPNFEKCFVQQYSMIHRLETDKLKNVAKFFAHLFSNDALSWHVLSYISLSEEDTTSSSRIY----------HLGIRLLNER
        YL+YYGLLGQRFCKINKVHQ NFEKCFVQQYSMIHRLET+KL+NVAKFFAHL   DAL WHVLSYI L+EEDTTSSSRI+          HLGIRLLNER
Subjt:  YLQYYGLLGQRFCKINKVHQPNFEKCFVQQYSMIHRLETDKLKNVAKFFAHLFSNDALSWHVLSYISLSEEDTTSSSRIY----------HLGIRLLNER

Query:  LTDPTMQVSFESIFSKDNPNNTRFAINFFMSIGLGGLTENLRAYLKNMPRLIVRQLKPVLDFDVESRSFDSSGSDSSAFESESDRSSSEESEGKDTRRAK
        L DPTMQ SFESIF +DNP NTRF+INFF SIGLGGLTENLR YLKNMPRLI++Q KPV D D ES S DSSGSDSS  +SESD SSSEESEG+D RR K
Subjt:  LTDPTMQVSFESIFSKDNPNNTRFAINFFMSIGLGGLTENLRAYLKNMPRLIVRQLKPVLDFDVESRSFDSSGSDSSAFESESDRSSSEESEGKDTRRAK

Query:  KRRKTRR
        KRRKT R
Subjt:  KRRKTRR

SwissProt top hits

e value

%identity

Alignment

Q08C72 Pre-mRNA-splicing factor CWC22 homolog

1.2e-117

47.67

Show/hide

Query:  MKSQMASPRFTDVFAALVAVVNTKFPEIGDLLLRRIVLQLKRAYKRNDKPRLLAAVKFIAHLVNQQVAHEIIALELLAVLLENPTDDSVEVVVGFVTECG
        +++Q ASP FT V++A+VA++N+KFP+IG+L+L+R++L  ++ Y+RNDK + L A KF+ HL+NQ VAHE++ LE+L +LLE PTDDSVEV + F+ ECG
Subjt:  MKSQMASPRFTDVFAALVAVVNTKFPEIGDLLLRRIVLQLKRAYKRNDKPRLLAAVKFIAHLVNQQVAHEIIALELLAVLLENPTDDSVEVVVGFVTECG

Query:  SMLQSCTPRGLHGIFERFRGILREGEIDKRVRFLIEGLFAIRKAKFKDYPAFRPELDLVELGDQVTHEISLQEEIDPVIALDIFKTDSNFLESEKCYEDL
          L   +PRG++ IFER R IL E EIDKRV+++IE +FAIRK  FKD+P     LDLVE  DQ TH + L++E +    L++FK D NFLE+E+ Y+ +
Subjt:  SMLQSCTPRGLHGIFERFRGILREGEIDKRVRFLIEGLFAIRKAKFKDYPAFRPELDLVELGDQVTHEISLQEEIDPVIALDIFKTDSNFLESEKCYEDL

Query:  KKNILGEESEDE-EDRFDVGSDEDEEEEDEYEK--EDQQHMEINDETETNLVSLRRTIYLTIMSKI--------------------ELCFMLLECCTHER
        K+ IL E S D  +D    G DED++EEDE     E+Q+ + I D+TE NLV+ RRTIYL I S +                    ELC M+L+CC  +R
Subjt:  KKNILGEESEDE-EDRFDVGSDEDEEEEDEYEK--EDQQHMEINDETETNLVSLRRTIYLTIMSKI--------------------ELCFMLLECCTHER

Query:  TYLQYYGLLGQRFCKINKVHQPNFEKCFVQQYSMIHRLETDKLKNVAKFFAHLFSNDALSWHVLSYISLSEEDTTSSSRIY----------HLGIRLLNE
        TY +++GLL  RFC + K +  +FE  F +QY  IHRLET+KL+NVA+ FAHL   D++ W VL  + +SE+ TTSSSRI+          ++G+  LNE
Subjt:  TYLQYYGLLGQRFCKINKVHQPNFEKCFVQQYSMIHRLETDKLKNVAKFFAHLFSNDALSWHVLSYISLSEEDTTSSSRIY----------HLGIRLLNE

Query:  RLTDPTMQVSFESIFSKDNPNNTRFAINFFMSIGLGGLTENLRAYLKNMPRLIVRQLKPVLDFDVESR------SFDSSGSDSSAFESESDRSSSEESEG
        RL D T+Q  FE +F +DNP NTRFAINFF SIGLGGLT+ LR +LKN P++I+ Q + V   D  S       S  SSGS S +  SESD  SS +S+ 
Subjt:  RLTDPTMQVSFESIFSKDNPNNTRFAINFFMSIGLGGLTENLRAYLKNMPRLIVRQLKPVLDFDVESR------SFDSSGSDSSAFESESDRSSSEESEG

Query:  KDTRRAKKRRKTRR
          +  +     +RR
Subjt:  KDTRRAKKRRKTRR

Q5RA93 Pre-mRNA-splicing factor CWC22 homolog

4.1e-121

50.3

Show/hide

Query:  MKSQMASPRFTDVFAALVAVVNTKFPEIGDLLLRRIVLQLKRAYKRNDKPRLLAAVKFIAHLVNQQVAHEIIALELLAVLLENPTDDSVEVVVGFVTECG
        +++Q ASP FT V+AALVA++N+KFP+IG+L+L+R++L  ++ Y+RNDK   L A KF+AHL+NQ VAHE++ LE+L +LLE PTDDSVEV +GF+ ECG
Subjt:  MKSQMASPRFTDVFAALVAVVNTKFPEIGDLLLRRIVLQLKRAYKRNDKPRLLAAVKFIAHLVNQQVAHEIIALELLAVLLENPTDDSVEVVVGFVTECG

Query:  SMLQSCTPRGLHGIFERFRGILREGEIDKRVRFLIEGLFAIRKAKFKDYPAFRPELDLVELGDQVTHEISLQEEIDPVIALDIFKTDSNFLESEKCYEDL
          L   +PRG++ IF R R IL E EIDKRV+++IE +FA+RK  FKD+P     LDLVE  DQ TH + L+++ +P   L++FK D NF+E+E+ Y+ +
Subjt:  SMLQSCTPRGLHGIFERFRGILREGEIDKRVRFLIEGLFAIRKAKFKDYPAFRPELDLVELGDQVTHEISLQEEIDPVIALDIFKTDSNFLESEKCYEDL

Query:  KKNILGEESEDEEDRFDVGS---DEDEEEEDEYEKEDQQHMEINDETETNLVSLRRTIYLTIMSKI--------------------ELCFMLLECCTHER
        KK IL E   D     D GS   DE+EEEE+  E E+ Q + I+D+TE NLVS RRTIYL I S +                    ELC M+L+CC  +R
Subjt:  KKNILGEESEDEEDRFDVGS---DEDEEEEDEYEKEDQQHMEINDETETNLVSLRRTIYLTIMSKI--------------------ELCFMLLECCTHER

Query:  TYLQYYGLLGQRFCKINKVHQPNFEKCFVQQYSMIHRLETDKLKNVAKFFAHLFSNDALSWHVLSYISLSEEDTTSSSRIY----------HLGIRLLNE
        TY +++GLL  RFC + K +  +FE  F +QY  IHRLET+KL+NVAK FAHL   D+L W VL  I LSEE TTSSSRI+          ++G+  LN 
Subjt:  TYLQYYGLLGQRFCKINKVHQPNFEKCFVQQYSMIHRLETDKLKNVAKFFAHLFSNDALSWHVLSYISLSEEDTTSSSRIY----------HLGIRLLNE

Query:  RLTDPTMQVSFESIFSKDNPNNTRFAINFFMSIGLGGLTENLRAYLKNMPRLIVRQLKPVLDFDVESRSFDSSGSDSSAFESESDRSSSEESEGKDT
        RL D T+Q  FE +  +DNP NTRFAINFF SIGLGGLT+ LR +LKN P++IV Q KP    DVE      S S S++  SESD SS  +S+  D+
Subjt:  RLTDPTMQVSFESIFSKDNPNNTRFAINFFMSIGLGGLTENLRAYLKNMPRLIVRQLKPVLDFDVESRSFDSSGSDSSAFESESDRSSSEESEGKDT

Q5ZKA3 Pre-mRNA-splicing factor CWC22 homolog

2.7e-117

47.67

Show/hide

Query:  MKSQMASPRFTDVFAALVAVVNTKFPEIGDLLLRRIVLQLKRAYKRNDKPRLLAAVKFIAHLVNQQVAHEIIALELLAVLLENPTDDSVEVVVGFVTECG
        +++Q ASP FT V+AALVA++N+KFP IG+L+L+R++L  ++ Y+RNDK   L + KF+AHL+NQ VAHE++ LE+L +LLE PTDDS+EV +GF+ E G
Subjt:  MKSQMASPRFTDVFAALVAVVNTKFPEIGDLLLRRIVLQLKRAYKRNDKPRLLAAVKFIAHLVNQQVAHEIIALELLAVLLENPTDDSVEVVVGFVTECG

Query:  SMLQSCTPRGLHGIFERFRGILREGEIDKRVRFLIEGLFAIRKAKFKDYPAFRPELDLVELGDQVTHEISLQEEIDPVIALDIFKTDSNFLESEKCYEDL
          L   +PRG++ IF+R R IL E +ID RV+++IE +FA+RK  FKD+P     LDLVE  DQ TH + L++E +P   L++FK D NF+E+E+ Y+ L
Subjt:  SMLQSCTPRGLHGIFERFRGILREGEIDKRVRFLIEGLFAIRKAKFKDYPAFRPELDLVELGDQVTHEISLQEEIDPVIALDIFKTDSNFLESEKCYEDL

Query:  KKNILGEESEDEEDRFDVGSDEDEEEEDEYEKEDQQHMEINDETETNLVSLRRTIYLTIMSKI--------------------ELCFMLLECCTHERTYL
        KK IL E   + E   + GS ++EEEEDE E ED Q + ++D+TE NLV    TIYL I S +                    ELC M+L+CC  +RTY 
Subjt:  KKNILGEESEDEEDRFDVGSDEDEEEEDEYEKEDQQHMEINDETETNLVSLRRTIYLTIMSKI--------------------ELCFMLLECCTHERTYL

Query:  QYYGLLGQRFCKINKVHQPNFEKCFVQQYSMIHRLETDKLKNVAKFFAHLFSNDALSWHVLSYISLSEEDTTSSSRIY----------HLGIRLLNERLT
        +++GLL  RFC + K +  +FE  F +QY  IHRLET+KL+NVAK FAHL   D++ W VL  I LSEE TTSSSRI+          ++G+  LN RL 
Subjt:  QYYGLLGQRFCKINKVHQPNFEKCFVQQYSMIHRLETDKLKNVAKFFAHLFSNDALSWHVLSYISLSEEDTTSSSRIY----------HLGIRLLNERLT

Query:  DPTMQVSFESIFSKDNPNNTRFAINFFMSIGLGGLTENLRAYLKNMPRLIVRQLKPVLDFDVESRS---------FDSSGSDSSAFESESDRSSSEESEG
        D T+Q  FE +  +DNP NTRFAINFF SIGLGGLT+ LR +LKN P++I+ Q + V   D  S S          DSS S S +  S    SSS +S  
Subjt:  DPTMQVSFESIFSKDNPNNTRFAINFFMSIGLGGLTENLRAYLKNMPRLIVRQLKPVLDFDVESRS---------FDSSGSDSSAFESESDRSSSEESEG

Query:  KDTRRAKKRRKTRR
         D  +AKKRR  ++
Subjt:  KDTRRAKKRRKTRR

Q8C5N3 Pre-mRNA-splicing factor CWC22 homolog

1.1e-123

51.1

Show/hide

Query:  MKSQMASPRFTDVFAALVAVVNTKFPEIGDLLLRRIVLQLKRAYKRNDKPRLLAAVKFIAHLVNQQVAHEIIALELLAVLLENPTDDSVEVVVGFVTECG
        +++Q ASP FT V+AALVA++N+KFP+IG+L+L+R++L  ++ Y+RNDK   L A KF+AHL+NQ VAHE++ LE+L +LLE PTDDSVEV +GF+ ECG
Subjt:  MKSQMASPRFTDVFAALVAVVNTKFPEIGDLLLRRIVLQLKRAYKRNDKPRLLAAVKFIAHLVNQQVAHEIIALELLAVLLENPTDDSVEVVVGFVTECG

Query:  SMLQSCTPRGLHGIFERFRGILREGEIDKRVRFLIEGLFAIRKAKFKDYPAFRPELDLVELGDQVTHEISLQEEIDPVIALDIFKTDSNFLESEKCYEDL
          L   +PRG++ IFER R IL E EIDKRV+++IE +FA+RK  FKD+P     LDLVE  DQ TH + L+++ +P   L++FK D NF+E+E+ Y+ +
Subjt:  SMLQSCTPRGLHGIFERFRGILREGEIDKRVRFLIEGLFAIRKAKFKDYPAFRPELDLVELGDQVTHEISLQEEIDPVIALDIFKTDSNFLESEKCYEDL

Query:  KKNILGEESEDEEDRFDVGSDEDEEEEDEYE----KEDQQHMEINDETETNLVSLRRTIYLTIMSKI--------------------ELCFMLLECCTHE
        KK IL E   D       GS EDEEEEDE E    +E  Q + I+D+TE NLVS RRTIYL I S +                    ELC M+L+CC  +
Subjt:  KKNILGEESEDEEDRFDVGSDEDEEEEDEYE----KEDQQHMEINDETETNLVSLRRTIYLTIMSKI--------------------ELCFMLLECCTHE

Query:  RTYLQYYGLLGQRFCKINKVHQPNFEKCFVQQYSMIHRLETDKLKNVAKFFAHLFSNDALSWHVLSYISLSEEDTTSSSRIY----------HLGIRLLN
        RTY +++GLL  RFC + K +  +FE  F +QY  IHRLET+KL+NVAK FAHL   D+L W VL  I LSEE TTSSSRI+          ++G+  LN
Subjt:  RTYLQYYGLLGQRFCKINKVHQPNFEKCFVQQYSMIHRLETDKLKNVAKFFAHLFSNDALSWHVLSYISLSEEDTTSSSRIY----------HLGIRLLN

Query:  ERLTDPTMQVSFESIFSKDNPNNTRFAINFFMSIGLGGLTENLRAYLKNMPRLIV------RQLKPVLDFDVESRSFDSSGSDSSAFESESDRSSSEES
         RL D T+Q  FE +  +DNP NTRFAINFF SIGLGGLT+ LR +LKN P++IV       Q KP L     S S  SS SDSS  ES+S  SSSE S
Subjt:  ERLTDPTMQVSFESIFSKDNPNNTRFAINFFMSIGLGGLTENLRAYLKNMPRLIV------RQLKPVLDFDVESRSFDSSGSDSSAFESESDRSSSEES

Q9HCG8 Pre-mRNA-splicing factor CWC22 homolog

6.3e-122

50.5

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Query:  MKSQMASPRFTDVFAALVAVVNTKFPEIGDLLLRRIVLQLKRAYKRNDKPRLLAAVKFIAHLVNQQVAHEIIALELLAVLLENPTDDSVEVVVGFVTECG
        +++Q ASP FT V+AALVA++N+KFP+IG+L+L+R++L  ++ Y+RNDK   L A KF+AHL+NQ VAHE++ LE+L +LLE PTDDSVEV +GF+ ECG
Subjt:  MKSQMASPRFTDVFAALVAVVNTKFPEIGDLLLRRIVLQLKRAYKRNDKPRLLAAVKFIAHLVNQQVAHEIIALELLAVLLENPTDDSVEVVVGFVTECG

Query:  SMLQSCTPRGLHGIFERFRGILREGEIDKRVRFLIEGLFAIRKAKFKDYPAFRPELDLVELGDQVTHEISLQEEIDPVIALDIFKTDSNFLESEKCYEDL
          L   +PRG++ IFER R IL E EIDKRV+++IE +FA+RK  FKD+P     LDLVE  DQ TH + L+++ +P   L++FK D NF+E+E+ Y+ +
Subjt:  SMLQSCTPRGLHGIFERFRGILREGEIDKRVRFLIEGLFAIRKAKFKDYPAFRPELDLVELGDQVTHEISLQEEIDPVIALDIFKTDSNFLESEKCYEDL

Query:  KKNILGEESEDEEDRFDVGS---DEDEEEEDEYEKEDQQHMEINDETETNLVSLRRTIYLTIMSKI--------------------ELCFMLLECCTHER
        KK IL E   D     D GS   DE+EEEE+  E E+ Q + I+D+TE NLVS RRTIYL I S +                    ELC M+L+CC  +R
Subjt:  KKNILGEESEDEEDRFDVGS---DEDEEEEDEYEKEDQQHMEINDETETNLVSLRRTIYLTIMSKI--------------------ELCFMLLECCTHER

Query:  TYLQYYGLLGQRFCKINKVHQPNFEKCFVQQYSMIHRLETDKLKNVAKFFAHLFSNDALSWHVLSYISLSEEDTTSSSRIY----------HLGIRLLNE
        TY +++GLL  RFC + K +  +FE  F +QY  IHRLET+KL+NVAK FAHL   D+L W VL  I LSEE TTSSSRI+          ++G+  LN 
Subjt:  TYLQYYGLLGQRFCKINKVHQPNFEKCFVQQYSMIHRLETDKLKNVAKFFAHLFSNDALSWHVLSYISLSEEDTTSSSRIY----------HLGIRLLNE

Query:  RLTDPTMQVSFESIFSKDNPNNTRFAINFFMSIGLGGLTENLRAYLKNMPRLIVRQLKPVLDFDVESRSFDSSGSDSSAFESESDRSSSEESEGKDT
        RL D T+Q  FE +  +DNP NTRFAINFF SIGLGGLT+ LR +LKN P++IV Q KP    DVE      S S S++  SESD SS  +S+  D+
Subjt:  RLTDPTMQVSFESIFSKDNPNNTRFAINFFMSIGLGGLTENLRAYLKNMPRLIVRQLKPVLDFDVESRSFDSSGSDSSAFESESDRSSSEESEGKDT

Arabidopsis top hits

e value

%identity

Alignment

AT1G52325.1 Initiation factor eIF-4 gamma, MA3

1.9e-12

35.14

Show/hide

Query:  IELCFMLLECCTHERTYLQYYGLLGQRFCKINKVHQPNFEKCFVQQYSMIHRLETDKLKNVAKFFAHLFSNDALSWHVLSYISLSEEDTTSSSRIYHLGI
        +ELC M+LECCT E+TY  +Y                                  D   +   F   LF            + LSE           L I
Subjt:  IELCFMLLECCTHERTYLQYYGLLGQRFCKINKVHQPNFEKCFVQQYSMIHRLETDKLKNVAKFFAHLFSNDALSWHVLSYISLSEEDTTSSSRIYHLGI

Query:  RLLNERLTDPTMQVSFESIFSKDNPNNTRFAINFFMSIGLGGLTENLR
        +LLNE+L DPTM+ +FESIF KD+  NT F+I FF  IGLGG+T+ LR
Subjt:  RLLNERLTDPTMQVSFESIFSKDNPNNTRFAINFFMSIGLGGLTENLR

AT1G80930.1 MIF4G domain-containing protein / MA3 domain-containing protein

3.2e-177

67.86

Show/hide

Query:  MKSQMASPRFTDVFAALVAVVNTKFPEIGDLLLRRIVLQLKRAYKRNDKPRLLAAVKFIAHLVNQQVAHEIIALELLAVLLENPTDDSVEVVVGFVTECG
        MKSQMASP FTDVFAALVAV+N KFPE+ +LLL+R+VLQLKRAYKRNDKP+LLAAVKFIAHLVNQQVA EIIALEL+ +LL +PTDDSVEV VGFVTECG
Subjt:  MKSQMASPRFTDVFAALVAVVNTKFPEIGDLLLRRIVLQLKRAYKRNDKPRLLAAVKFIAHLVNQQVAHEIIALELLAVLLENPTDDSVEVVVGFVTECG

Query:  SMLQSCTPRGLHGIFERFRGILREGEIDKRVRFLIEGLFAIRKAKFKDYPAFRPELDLVELGDQVTHEISLQEEIDPVIALDIFKTDSNFLESEKCYEDL
        +MLQ  +PRGL+GIFERFRGIL EGEIDKRV++LIE LFA RKAKF+ +PA RPELDLVE  ++ +H++SL  EIDP  ALDIFK D +F+E+EK YE L
Subjt:  SMLQSCTPRGLHGIFERFRGILREGEIDKRVRFLIEGLFAIRKAKFKDYPAFRPELDLVELGDQVTHEISLQEEIDPVIALDIFKTDSNFLESEKCYEDL

Query:  KKNILGEESEDEEDRFDVGSDEDEEEEDEYEKEDQQHMEINDETETNLVSLRRTIYLTIMSKI--------------------ELCFMLLECCTHERTYL
        KK +LG+E  ++ED  D  S++++EEEDE ++ED++ M I DETETNLV+LRRTIYLTIMS +                    ELC MLLECC+ ERTYL
Subjt:  KKNILGEESEDEEDRFDVGSDEDEEEEDEYEKEDQQHMEINDETETNLVSLRRTIYLTIMSKI--------------------ELCFMLLECCTHERTYL

Query:  QYYGLLGQRFCKINKVHQPNFEKCFVQQYSMIHRLETDKLKNVAKFFAHLFSNDALSWHVLSYISLSEEDTTSSSRIY----------HLGIRLLNERLT
        +YYGLLGQRFC INK+HQ NFEKCFVQQYSMIHRLET+KL+NVAKFFAHL   DAL WHVL+YI L+EEDTTSSSRI+          HLGIRLLNERL 
Subjt:  QYYGLLGQRFCKINKVHQPNFEKCFVQQYSMIHRLETDKLKNVAKFFAHLFSNDALSWHVLSYISLSEEDTTSSSRIY----------HLGIRLLNERLT

Query:  DPTMQVSFESIFSKDNPNNTRFAINFFMSIGLGGLTENLRAYLKNMPRLIVRQLKPVLDFDVESRSFDSSGSDSSAFESESDRSSSEESEGKDTRRAKKR
        DPTMQ S ESIF KDNP NTRFAINFF SIGLGG+TENLR YLKNMP LI+++ K V     ES S  SSGSDSS  ESES+  SS  S   ++ R K++
Subjt:  DPTMQVSFESIFSKDNPNNTRFAINFFMSIGLGGLTENLRAYLKNMPRLIVRQLKPVLDFDVESRSFDSSGSDSSAFESESDRSSSEESEGKDTRRAKKR

Query:  RKTR
        R+ R
Subjt:  RKTR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAAGTCACAAATGGCATCTCCAAGGTTCACCGATGTATTTGCCGCACTGGTTGCTGTTGTGAATACCAAGTTTCCAGAAATTGGTGATCTTCTATTGAGAAGAATTGT
TTTGCAACTCAAAAGAGCGTATAAACGGAACGACAAGCCTCGACTACTAGCTGCTGTGAAATTTATAGCACATTTAGTTAATCAGCAAGTGGCTCATGAAATTATTGCAT
TAGAATTACTCGCCGTGTTGCTGGAGAATCCTACCGACGATAGTGTGGAGGTGGTGGTCGGTTTTGTAACCGAGTGTGGATCGATGCTACAGAGTTGTACTCCTAGAGGG
CTTCATGGAATATTCGAGCGCTTTCGCGGAATTCTTCGTGAAGGGGAAATAGACAAAAGGGTTCGGTTTCTGATTGAAGGCCTATTTGCAATAAGGAAAGCTAAGTTTAA
GGACTATCCAGCTTTTCGTCCAGAACTAGACCTTGTGGAGCTTGGAGACCAAGTAACTCATGAAATCTCCCTGCAAGAAGAAATAGATCCTGTGATTGCTCTTGATATCT
TCAAAACTGATTCAAATTTCCTTGAAAGTGAGAAGTGTTACGAGGATTTAAAGAAAAATATACTTGGTGAGGAATCTGAAGATGAAGAAGACCGATTCGATGTTGGATCA
GATGAAGACGAGGAAGAGGAAGATGAATATGAAAAAGAAGACCAGCAACATATGGAAATAAATGATGAAACAGAGACCAATCTTGTGAGCCTTAGAAGGACAATTTATCT
AACTATTATGTCTAAAATAGAGTTGTGCTTCATGCTATTGGAATGTTGCACTCATGAGAGAACTTACCTTCAATATTATGGTCTCTTAGGACAAAGATTTTGCAAGATCA
ACAAAGTGCATCAACCTAACTTTGAGAAATGCTTTGTCCAGCAATATTCTATGATTCATAGGCTTGAAACTGATAAGCTAAAAAATGTGGCTAAATTTTTTGCCCATTTA
TTCAGCAATGATGCTCTTTCATGGCATGTCTTGTCTTACATTAGCTTGTCCGAAGAAGACACCACTTCTTCCTCTAGGATTTATCATTTGGGTATTCGACTATTGAATGA
ACGTCTCACGGACCCGACAATGCAGGTTTCGTTTGAATCGATTTTCTCCAAGGATAACCCAAATAACACAAGATTTGCCATCAACTTCTTCATGTCTATTGGGCTTGGTG
GTCTGACAGAGAATTTGAGAGCATATTTGAAGAATATGCCACGGCTAATCGTGCGACAACTAAAACCAGTGTTAGACTTCGATGTGGAATCAAGAAGTTTCGATTCGTCG
GGTTCAGATTCAAGTGCTTTCGAGTCGGAATCAGATCGGTCAAGCTCTGAGGAAAGTGAAGGCAAAGATACAAGACGTGCGAAAAAGAGGAGGAAAACAAGAAGGTGA

mRNA sequence

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Protein sequence

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MKSQMASPRFTDVFAALVAVVNTKFPEIGDLLLRRIVLQLKRAYKRNDKPRLLAAVKFIAHLVNQQVAHEIIALELLAVLLENPTDDSVEVVVGFVTECGSMLQSCTPRG
LHGIFERFRGILREGEIDKRVRFLIEGLFAIRKAKFKDYPAFRPELDLVELGDQVTHEISLQEEIDPVIALDIFKTDSNFLESEKCYEDLKKNILGEESEDEEDRFDVGS
DEDEEEEDEYEKEDQQHMEINDETETNLVSLRRTIYLTIMSKIELCFMLLECCTHERTYLQYYGLLGQRFCKINKVHQPNFEKCFVQQYSMIHRLETDKLKNVAKFFAHL
FSNDALSWHVLSYISLSEEDTTSSSRIYHLGIRLLNERLTDPTMQVSFESIFSKDNPNNTRFAINFFMSIGLGGLTENLRAYLKNMPRLIVRQLKPVLDFDVESRSFDSS
GSDSSAFESESDRSSSEESEGKDTRRAKKRRKTRR

Sed0023269 (gene) of Chayote v1 genome