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Sed0023272 (gene) of Chayote v1 genome

Gene IDSed0023272
OrganismSechium edule (Chayote v1)
DescriptionLOW QUALITY PROTEIN: FYN-binding protein 1-like
Genome locationLG09:40225467..40230606
RNA-Seq ExpressionSed0023272
SyntenySed0023272
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141680.1 uncharacterized protein LOC101218777 isoform X2 [Cucumis sativus]4.7e-5369.27Show/hide
Query:  MSEAKPPKLYTNKPKKARVKQFQEKHKARDASYSAAPVASSKMGFGPPPPPPVKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKKDEHVAEED------
        MSE   PKLY NKP KA++KQFQE+HKA DAS SA+   +S     PPPP P KESFARRYKFLWPMLLTVNLAVGAY+F RTKK+DEHVAEE+      
Subjt:  MSEAKPPKLYTNKPKKARVKQFQEKHKARDASYSAAPVASSKMGFGPPPPPPVKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKKDEHVAEED------

Query:  -----AASAVEESSPRPPAIVEPAKVREPIPVARQREIFKWILEEKNKIKPKDREEKKRIEEDKAILKEFIQAKSFPNV
             AA  VEES  R P +VEP KVREPIPV +QRE+FKWILEEK KIKPKDREEKKRI+E+KAILKEFI+AKS P++
Subjt:  -----AASAVEESSPRPPAIVEPAKVREPIPVARQREIFKWILEEKNKIKPKDREEKKRIEEDKAILKEFIQAKSFPNV

XP_008462358.1 PREDICTED: uncharacterized protein LOC103500733 isoform X1 [Cucumis melo]5.6e-5469.83Show/hide
Query:  MSEAKPPKLYTNKP-KKARVKQFQEKHKARDASYSAAPVASSKMGFGPPPPPPVKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKKDEHVAEEDA----
        MSE   PKLY NKP K A++KQFQE+HKA DAS SA+   +S     PPPP P KESFARRYKFLWPMLLTVNLAVGAY+F RTKK+DEHVAEE+A    
Subjt:  MSEAKPPKLYTNKP-KKARVKQFQEKHKARDASYSAAPVASSKMGFGPPPPPPVKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKKDEHVAEEDA----

Query:  ------ASAVEESSPRPPAIVEPAKVREPIPVARQREIFKWILEEKNKIKPKDREEKKRIEEDKAILKEFIQAKSFPNV
              A+ V E S   PAIVEP KVREPIPV +QRE+FKWILEEK KIKPKDREEKKRI+E+KAILKEFI+AKS PN+
Subjt:  ------ASAVEESSPRPPAIVEPAKVREPIPVARQREIFKWILEEKNKIKPKDREEKKRIEEDKAILKEFIQAKSFPNV

XP_008462359.1 PREDICTED: uncharacterized protein LOC103500733 isoform X2 [Cucumis melo]2.3e-5570.22Show/hide
Query:  MSEAKPPKLYTNKPKKARVKQFQEKHKARDASYSAAPVASSKMGFGPPPPPPVKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKKDEHVAEEDA-----
        MSE   PKLY NKP KA++KQFQE+HKA DAS SA+   +S     PPPP P KESFARRYKFLWPMLLTVNLAVGAY+F RTKK+DEHVAEE+A     
Subjt:  MSEAKPPKLYTNKPKKARVKQFQEKHKARDASYSAAPVASSKMGFGPPPPPPVKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKKDEHVAEEDA-----

Query:  -----ASAVEESSPRPPAIVEPAKVREPIPVARQREIFKWILEEKNKIKPKDREEKKRIEEDKAILKEFIQAKSFPNV
             A+ V E S   PAIVEP KVREPIPV +QRE+FKWILEEK KIKPKDREEKKRI+E+KAILKEFI+AKS PN+
Subjt:  -----ASAVEESSPRPPAIVEPAKVREPIPVARQREIFKWILEEKNKIKPKDREEKKRIEEDKAILKEFIQAKSFPNV

XP_011659646.1 uncharacterized protein LOC101218777 isoform X1 [Cucumis sativus]1.2e-5168.89Show/hide
Query:  MSEAKPPKLYTNKP-KKARVKQFQEKHKARDASYSAAPVASSKMGFGPPPPPPVKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKKDEHVAEED-----
        MSE   PKLY NKP K A++KQFQE+HKA DAS SA+   +S     PPPP P KESFARRYKFLWPMLLTVNLAVGAY+F RTKK+DEHVAEE+     
Subjt:  MSEAKPPKLYTNKP-KKARVKQFQEKHKARDASYSAAPVASSKMGFGPPPPPPVKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKKDEHVAEED-----

Query:  ------AASAVEESSPRPPAIVEPAKVREPIPVARQREIFKWILEEKNKIKPKDREEKKRIEEDKAILKEFIQAKSFPNV
              AA  VEES  R P +VEP KVREPIPV +QRE+FKWILEEK KIKPKDREEKKRI+E+KAILKEFI+AKS P++
Subjt:  ------AASAVEESSPRPPAIVEPAKVREPIPVARQREIFKWILEEKNKIKPKDREEKKRIEEDKAILKEFIQAKSFPNV

XP_038898399.1 uncharacterized protein LOC120086050 [Benincasa hispida]4.1e-5770.81Show/hide
Query:  MSEAKPPKLYTNKPKKARVKQFQEKHKARDASYSAAPVASSKMGFG---------PPPPPPVKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKKDEHVA
        MSE +PPKLY NKPKKA+VKQFQE+HK RDAS S AP ASS M            P PP P KESFARRYKFLWPMLLTVNLAVGAYLF RTKK+DEHVA
Subjt:  MSEAKPPKLYTNKPKKARVKQFQEKHKARDASYSAAPVASSKMGFG---------PPPPPPVKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKKDEHVA

Query:  EEDA--------ASAVEESSPRPPAIVEPAKVREPIPVARQREIFKWILEEKNKIKPKDREEKKRIEEDKAILKEFIQAKSFPNV
        +EDA        A  V E S   PAIVEP KVREPIPV +QRE+FKWILEEK KIKPKDREEKKRI+E+KAILK+FI+AKS PN+
Subjt:  EEDA--------ASAVEESSPRPPAIVEPAKVREPIPVARQREIFKWILEEKNKIKPKDREEKKRIEEDKAILKEFIQAKSFPNV

TrEMBL top hitse value%identityAlignment
A0A0A0KAZ6 Uncharacterized protein2.3e-5369.27Show/hide
Query:  MSEAKPPKLYTNKPKKARVKQFQEKHKARDASYSAAPVASSKMGFGPPPPPPVKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKKDEHVAEED------
        MSE   PKLY NKP KA++KQFQE+HKA DAS SA+   +S     PPPP P KESFARRYKFLWPMLLTVNLAVGAY+F RTKK+DEHVAEE+      
Subjt:  MSEAKPPKLYTNKPKKARVKQFQEKHKARDASYSAAPVASSKMGFGPPPPPPVKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKKDEHVAEED------

Query:  -----AASAVEESSPRPPAIVEPAKVREPIPVARQREIFKWILEEKNKIKPKDREEKKRIEEDKAILKEFIQAKSFPNV
             AA  VEES  R P +VEP KVREPIPV +QRE+FKWILEEK KIKPKDREEKKRI+E+KAILKEFI+AKS P++
Subjt:  -----AASAVEESSPRPPAIVEPAKVREPIPVARQREIFKWILEEKNKIKPKDREEKKRIEEDKAILKEFIQAKSFPNV

A0A1S3CGT4 uncharacterized protein LOC103500733 isoform X21.1e-5570.22Show/hide
Query:  MSEAKPPKLYTNKPKKARVKQFQEKHKARDASYSAAPVASSKMGFGPPPPPPVKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKKDEHVAEEDA-----
        MSE   PKLY NKP KA++KQFQE+HKA DAS SA+   +S     PPPP P KESFARRYKFLWPMLLTVNLAVGAY+F RTKK+DEHVAEE+A     
Subjt:  MSEAKPPKLYTNKPKKARVKQFQEKHKARDASYSAAPVASSKMGFGPPPPPPVKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKKDEHVAEEDA-----

Query:  -----ASAVEESSPRPPAIVEPAKVREPIPVARQREIFKWILEEKNKIKPKDREEKKRIEEDKAILKEFIQAKSFPNV
             A+ V E S   PAIVEP KVREPIPV +QRE+FKWILEEK KIKPKDREEKKRI+E+KAILKEFI+AKS PN+
Subjt:  -----ASAVEESSPRPPAIVEPAKVREPIPVARQREIFKWILEEKNKIKPKDREEKKRIEEDKAILKEFIQAKSFPNV

A0A1S3CIB4 uncharacterized protein LOC103500733 isoform X12.7e-5469.83Show/hide
Query:  MSEAKPPKLYTNKP-KKARVKQFQEKHKARDASYSAAPVASSKMGFGPPPPPPVKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKKDEHVAEEDA----
        MSE   PKLY NKP K A++KQFQE+HKA DAS SA+   +S     PPPP P KESFARRYKFLWPMLLTVNLAVGAY+F RTKK+DEHVAEE+A    
Subjt:  MSEAKPPKLYTNKP-KKARVKQFQEKHKARDASYSAAPVASSKMGFGPPPPPPVKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKKDEHVAEEDA----

Query:  ------ASAVEESSPRPPAIVEPAKVREPIPVARQREIFKWILEEKNKIKPKDREEKKRIEEDKAILKEFIQAKSFPNV
              A+ V E S   PAIVEP KVREPIPV +QRE+FKWILEEK KIKPKDREEKKRI+E+KAILKEFI+AKS PN+
Subjt:  ------ASAVEESSPRPPAIVEPAKVREPIPVARQREIFKWILEEKNKIKPKDREEKKRIEEDKAILKEFIQAKSFPNV

A0A6J1DFU1 uncharacterized protein LOC1110206751.3e-5165.8Show/hide
Query:  MSEAKPPKLYTNKPKKARVKQFQEKHKARDASYSA--------APVASSKMG--FGPPPPPPVKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKK-DEH
        MSE +PPKLY NKPKKA+VKQFQ++HK +DAS S+        +  A S MG     PPP P+KESFARRYKFLWPMLLTVNLA+GAYLFTRTKK+ D+H
Subjt:  MSEAKPPKLYTNKPKKARVKQFQEKHKARDASYSA--------APVASSKMG--FGPPPPPPVKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKK-DEH

Query:  VAEED--------------AASAVEESSPRPPAIVEPAKVREPIPVARQREIFKWILEEKNKIKPKDREEKKRIEEDKAILKEFIQAKSFPNV
        V EE+              AA  +EES  R PAIVEP KVREPIPV +QRE+FKWILEEK KIKPKDREEKKRI+E+KAILK+FI+AKS PNV
Subjt:  VAEED--------------AASAVEESSPRPPAIVEPAKVREPIPVARQREIFKWILEEKNKIKPKDREEKKRIEEDKAILKEFIQAKSFPNV

E5GCA6 Uncharacterized protein1.1e-5570.22Show/hide
Query:  MSEAKPPKLYTNKPKKARVKQFQEKHKARDASYSAAPVASSKMGFGPPPPPPVKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKKDEHVAEEDA-----
        MSE   PKLY NKP KA++KQFQE+HKA DAS SA+   +S     PPPP P KESFARRYKFLWPMLLTVNLAVGAY+F RTKK+DEHVAEE+A     
Subjt:  MSEAKPPKLYTNKPKKARVKQFQEKHKARDASYSAAPVASSKMGFGPPPPPPVKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKKDEHVAEEDA-----

Query:  -----ASAVEESSPRPPAIVEPAKVREPIPVARQREIFKWILEEKNKIKPKDREEKKRIEEDKAILKEFIQAKSFPNV
             A+ V E S   PAIVEP KVREPIPV +QRE+FKWILEEK KIKPKDREEKKRI+E+KAILKEFI+AKS PN+
Subjt:  -----ASAVEESSPRPPAIVEPAKVREPIPVARQREIFKWILEEKNKIKPKDREEKKRIEEDKAILKEFIQAKSFPNV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G55160.1 unknown protein4.3e-3652.41Show/hide
Query:  MSEAKPPKLYTNKPKK----ARVKQFQEKHK------ARDASYSAAPVASSKMGFGP-PPPPPVKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKKD-E
        MSE + PKL+TNKPKK    A++K  +          +   S +AA  AS  MG G  PPPPP KESFARRYK++WP+LLTVNLAVG YLF RTKKKD +
Subjt:  MSEAKPPKLYTNKPKK----ARVKQFQEKHK------ARDASYSAAPVASSKMGFGP-PPPPPVKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKKD-E

Query:  HVAEEDAASAVEESSP-------RPPAIVEPA--KVREPIPVARQREIFKWILEEKNKIKPKDREEKKRIEEDKAILKEFIQAKSFP
         V EE AA +   ++P           + EP   K REPIP  +QRE+FKW+LEEK K+ PK+ EEKKR +E+KAILK+FI +K+ P
Subjt:  HVAEEDAASAVEESSP-------RPPAIVEPA--KVREPIPVARQREIFKWILEEKNKIKPKDREEKKRIEEDKAILKEFIQAKSFP

AT1G55160.2 unknown protein1.7e-3257.89Show/hide
Query:  GFGPPPPPPVKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKKD-EHVAEEDAASAVEESSP-------RPPAIVEPA--KVREPIPVARQREIFKWILE
        G   PPPPP KESFARRYK++WP+LLTVNLAVG YLF RTKKKD + V EE AA +   ++P           + EP   K REPIP  +QRE+FKW+LE
Subjt:  GFGPPPPPPVKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKKD-EHVAEEDAASAVEESSP-------RPPAIVEPA--KVREPIPVARQREIFKWILE

Query:  EKNKIKPKDREEKKRIEEDKAILKEFIQAKSFP
        EK K+ PK+ EEKKR +E+KAILK+FI +K+ P
Subjt:  EKNKIKPKDREEKKRIEEDKAILKEFIQAKSFP

AT1G55160.3 unknown protein4.9e-3246.23Show/hide
Query:  MSEAKPPKLYTNKPKK----ARVKQFQEKHK------ARDASYSAAPVASSKMGFGP-PPPPPVKESFARRYKFLWPMLLTVNLAVG-------------
        MSE + PKL+TNKPKK    A++K  +          +   S +AA  AS  MG G  PPPPP KESFARRYK++WP+LLTVNLAVG             
Subjt:  MSEAKPPKLYTNKPKK----ARVKQFQEKHK------ARDASYSAAPVASSKMGFGP-PPPPPVKESFARRYKFLWPMLLTVNLAVG-------------

Query:  ------------AYLFTRTKKKD-EHVAEEDAASAVEESSP-------RPPAIVEPA--KVREPIPVARQREIFKWILEEKNKIKPKDREEKKRIEEDKA
                    +YLF RTKKKD + V EE AA +   ++P           + EP   K REPIP  +QRE+FKW+LEEK K+ PK+ EEKKR +E+KA
Subjt:  ------------AYLFTRTKKKD-EHVAEEDAASAVEESSP-------RPPAIVEPA--KVREPIPVARQREIFKWILEEKNKIKPKDREEKKRIEEDKA

Query:  ILKEFIQAKSFP
        ILK+FI +K+ P
Subjt:  ILKEFIQAKSFP

AT2G19530.1 unknown protein4.3e-1252.11Show/hide
Query:  AVEESSPRPPAIVEPAKVREPIPVARQREIFKWILEEKNKIKPKDREEKKRIEEDKAILKEFIQAKSFPNV
        A ++S  +  A       R+PIP   Q+E+FKWILEEK KI+PKDR+EKK+I+E+KAILK+FI+A+  P +
Subjt:  AVEESSPRPPAIVEPAKVREPIPVARQREIFKWILEEKNKIKPKDREEKKRIEEDKAILKEFIQAKSFPNV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGAAGCAAAACCTCCCAAGCTCTACACCAACAAACCCAAGAAAGCTCGGGTGAAGCAGTTTCAAGAGAAGCATAAAGCAAGAGACGCTTCTTATTCGGCGGCGCC
GGTAGCGTCGTCGAAGATGGGATTTGGGCCTCCGCCTCCGCCGCCGGTGAAGGAATCGTTTGCGAGGCGGTATAAGTTCTTGTGGCCCATGCTTTTGACTGTCAACCTTG
CTGTTGGAGCTTATCTGTTTACGAGGACAAAGAAGAAAGATGAACATGTAGCTGAAGAAGACGCCGCCTCGGCTGTCGAGGAATCATCTCCCAGACCACCAGCCATTGTG
GAGCCTGCGAAGGTAAGGGAACCAATTCCGGTGGCTCGACAGCGTGAAATTTTCAAGTGGATCTTGGAAGAGAAGAATAAGATAAAGCCAAAAGATCGCGAAGAGAAGAA
ACGCATCGAAGAAGATAAAGCAATTCTCAAAGAGTTCATCCAAGCAAAATCTTTTCCAAATGTTTGA
mRNA sequenceShow/hide mRNA sequence
CCGACGGGGAGAGCAAGTCCTTTCGAACAGCCAAAATCAGCCATCAAACACACAAAAAATAGAGAGAAAAACCGAACTCACAGTCGCCGGAGATGAGCGAAGCAAAACCT
CCCAAGCTCTACACCAACAAACCCAAGAAAGCTCGGGTGAAGCAGTTTCAAGAGAAGCATAAAGCAAGAGACGCTTCTTATTCGGCGGCGCCGGTAGCGTCGTCGAAGAT
GGGATTTGGGCCTCCGCCTCCGCCGCCGGTGAAGGAATCGTTTGCGAGGCGGTATAAGTTCTTGTGGCCCATGCTTTTGACTGTCAACCTTGCTGTTGGAGCTTATCTGT
TTACGAGGACAAAGAAGAAAGATGAACATGTAGCTGAAGAAGACGCCGCCTCGGCTGTCGAGGAATCATCTCCCAGACCACCAGCCATTGTGGAGCCTGCGAAGGTAAGG
GAACCAATTCCGGTGGCTCGACAGCGTGAAATTTTCAAGTGGATCTTGGAAGAGAAGAATAAGATAAAGCCAAAAGATCGCGAAGAGAAGAAACGCATCGAAGAAGATAA
AGCAATTCTCAAAGAGTTCATCCAAGCAAAATCTTTTCCAAATGTTTGAACTTTCCAAATGGAGGCAAGCAAACTATTGACTGTTCTACATTGCTGATGGAATCTGAATG
TTGCCGATTTTTGTGGTCCTTAAATGATTTTGTACGTTTCAAATCCTCCCACCACCCCCACCCCCACACGCTACTCGACAGGATGAACACGGTTACGTCCAGAAAACCAG
CAATGAAATTCATTAGGCCTCTATCGATATCGGTGCAGAATTTCCGATACGAAACAGAACCTTCACTGTATTGGAAAAAAGGAATATCCTTTCTTTTTTTGTGGTTGTTT
GTACGAGGAAAATTTTCATTTTATTAGCTCTCCCAACTTGAGAAAAAATCCAAGCAACTTCTGCAACTTGAAGAGTTCACATGGGCAGAATAAAATGTTGCACCATTTCC
CAAATGGATGTGGACTCTAATGTGTATGGTGAGATTTCTTTATCTATTGCATGCATAAGCCTCCAAAATGCAACTTCCAATG
Protein sequenceShow/hide protein sequence
MSEAKPPKLYTNKPKKARVKQFQEKHKARDASYSAAPVASSKMGFGPPPPPPVKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKKDEHVAEEDAASAVEESSPRPPAIV
EPAKVREPIPVARQREIFKWILEEKNKIKPKDREEKKRIEEDKAILKEFIQAKSFPNV