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Sed0023283 (gene) of Chayote v1 genome

Gene IDSed0023283
OrganismSechium edule (Chayote v1)
DescriptionAcyl carrier protein
Genome locationLG09:40325328..40326553
RNA-Seq ExpressionSed0023283
SyntenySed0023283
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0009536 - plastid (cellular component)
GO:0000036 - acyl carrier activity (molecular function)
InterPro domainsIPR003231 - Acyl carrier protein (ACP)
IPR009081 - Phosphopantetheine binding ACP domain
IPR036736 - ACP-like superfamily
IPR044813 - Acyl carrier protein, chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059374.1 acyl carrier protein 1 [Cucumis melo var. makuwa]6.9e-5177.07Show/hide
Query:  MSSSFASSPLPTTLPCISSTQNRITVY----RLSTRDGSLFWGQRVFPNIQMTKATKGSISPLPSYFKSRISCSLAQAETLQVVQEIIAKQLSLEQSAVI
        MSS+FASSPLP TLPC SS +N+ T       LS +DGSLF G+RVFP+++M KA KG+ S L   FKS+I CS+AQ ETL+VVQEIIAKQLSLEQSAVI
Subjt:  MSSSFASSPLPTTLPCISSTQNRITVY----RLSTRDGSLFWGQRVFPNIQMTKATKGSISPLPSYFKSRISCSLAQAETLQVVQEIIAKQLSLEQSAVI

Query:  PQTKFSELGADSLDTVEIMMALEEKFEVSIGEGGAEGISTVQDAADLIEKVKASSAS
        PQTKFS+LGADSLDTVEIMMALEEKF VSIGEGGAEGISTVQDAADLIEKVKASSAS
Subjt:  PQTKFSELGADSLDTVEIMMALEEKFEVSIGEGGAEGISTVQDAADLIEKVKASSAS

KAE8646494.1 hypothetical protein Csa_016687 [Cucumis sativus]2.0e-5076.43Show/hide
Query:  MSSSFASSPLPTTLPCISSTQNRITVY----RLSTRDGSLFWGQRVFPNIQMTKATKGSISPLPSYFKSRISCSLAQAETLQVVQEIIAKQLSLEQSAVI
        MSSSFASSPLPTT  C SS +N+ TV      LS RDGSLF G+RVFP++++ KA KG+ S L   F+S+I CS+AQ ETL+VVQEIIAKQLSLEQSAVI
Subjt:  MSSSFASSPLPTTLPCISSTQNRITVY----RLSTRDGSLFWGQRVFPNIQMTKATKGSISPLPSYFKSRISCSLAQAETLQVVQEIIAKQLSLEQSAVI

Query:  PQTKFSELGADSLDTVEIMMALEEKFEVSIGEGGAEGISTVQDAADLIEKVKASSAS
        PQTKFS+LGADSLDTVEIMMALEE+F VSIGEGGAEGISTVQDAADLIEKVKASSAS
Subjt:  PQTKFSELGADSLDTVEIMMALEEKFEVSIGEGGAEGISTVQDAADLIEKVKASSAS

XP_008462262.1 PREDICTED: acyl carrier protein 1, chloroplastic-like isoform X1 [Cucumis melo]5.8e-5076.43Show/hide
Query:  MSSSFASSPLPTTLPCISSTQNRITVY----RLSTRDGSLFWGQRVFPNIQMTKATKGSISPLPSYFKSRISCSLAQAETLQVVQEIIAKQLSLEQSAVI
        MSS+FASSPLP TL C SS +N+ T       LS +DGSLF G+RVFP+++M KA KG+ S L   FKS+I CS+AQ ETL+VVQEIIAKQLSLEQSAVI
Subjt:  MSSSFASSPLPTTLPCISSTQNRITVY----RLSTRDGSLFWGQRVFPNIQMTKATKGSISPLPSYFKSRISCSLAQAETLQVVQEIIAKQLSLEQSAVI

Query:  PQTKFSELGADSLDTVEIMMALEEKFEVSIGEGGAEGISTVQDAADLIEKVKASSAS
        PQTKFS+LGADSLDTVEIMMALEEKF VSIGEGGAEGISTVQDAADLIEKVKASSAS
Subjt:  PQTKFSELGADSLDTVEIMMALEEKFEVSIGEGGAEGISTVQDAADLIEKVKASSAS

XP_023514490.1 acyl carrier protein 1, chloroplastic-like [Cucurbita pepo subsp. pepo]8.1e-4474.36Show/hide
Query:  SSFASSPLPTTLPCISSTQNRITVYRLSTRDG-----SLFWGQRVFPNIQMTKATKGSISPLPSYFKSRISCSLAQAETLQVVQEIIAKQLSLEQSAVIP
        SS A SPL TTL   +S  N  T +R  +R+      SLF  QRVFP+IQM K  +G +  LP+YFKS ISCSLAQ ET+QVVQEIIAKQLSLEQSAVIP
Subjt:  SSFASSPLPTTLPCISSTQNRITVYRLSTRDG-----SLFWGQRVFPNIQMTKATKGSISPLPSYFKSRISCSLAQAETLQVVQEIIAKQLSLEQSAVIP

Query:  QTKFSELGADSLDTVEIMMALEEKFEVSIGEGGAEGISTVQDAADLIEKVKASSAS
        QTKFSELGADSLDTVEIMMALEEKF VSIGEGGAEGISTVQDAADLIEKVK SSAS
Subjt:  QTKFSELGADSLDTVEIMMALEEKFEVSIGEGGAEGISTVQDAADLIEKVKASSAS

XP_038897463.1 acyl carrier protein-like [Benincasa hispida]2.9e-4977.92Show/hide
Query:  SSFASSPLPTTLPCISSTQNRITVYRLST---RDGSLFWGQRVFPNIQMTKATKGSISPLPSYFKSRISCSLAQAETLQVVQEIIAKQLSLEQSAVIPQT
        SSF S PL TTLPC  ST+N+ T+  LS+   RDG+L  GQR+F N++M KA+KG+ S LP+ FKS ISCSLAQ ETLQVVQEIIAKQLSLEQSAVIPQT
Subjt:  SSFASSPLPTTLPCISSTQNRITVYRLST---RDGSLFWGQRVFPNIQMTKATKGSISPLPSYFKSRISCSLAQAETLQVVQEIIAKQLSLEQSAVIPQT

Query:  KFSELGADSLDTVEIMMALEEKFEVSIGEGGAEGISTVQDAADLIEKVKASSAS
        KFS+LGADSLDTVEIMMALEEKF VSIGEGGAEGISTVQDA DLIEKVKASSAS
Subjt:  KFSELGADSLDTVEIMMALEEKFEVSIGEGGAEGISTVQDAADLIEKVKASSAS

TrEMBL top hitse value%identityAlignment
A0A0A0K6W2 Acyl carrier protein9.7e-4380.8Show/hide
Query:  LSTRDGSLFWGQRVFPNIQMTKATKGSISPLPSYFKSRISCSLAQAETLQVVQEIIAKQLSLEQSAVIPQTKFSELGADSLDTVEIMMALEEKFEVSIGE
        LS RDGSLF G+RVFP++++ KA KG+ S L   F+S+I CS+AQ ETL+VVQEIIAKQLSLEQSAVIPQTKFS+LGADSLDTVEIMMALEE+F VSIGE
Subjt:  LSTRDGSLFWGQRVFPNIQMTKATKGSISPLPSYFKSRISCSLAQAETLQVVQEIIAKQLSLEQSAVIPQTKFSELGADSLDTVEIMMALEEKFEVSIGE

Query:  GGAEGISTVQDAADLIEKVKASSAS
        GGAEGISTVQDAADLIEKVKASSAS
Subjt:  GGAEGISTVQDAADLIEKVKASSAS

A0A1S3CGK8 Acyl carrier protein2.8e-5076.43Show/hide
Query:  MSSSFASSPLPTTLPCISSTQNRITVY----RLSTRDGSLFWGQRVFPNIQMTKATKGSISPLPSYFKSRISCSLAQAETLQVVQEIIAKQLSLEQSAVI
        MSS+FASSPLP TL C SS +N+ T       LS +DGSLF G+RVFP+++M KA KG+ S L   FKS+I CS+AQ ETL+VVQEIIAKQLSLEQSAVI
Subjt:  MSSSFASSPLPTTLPCISSTQNRITVY----RLSTRDGSLFWGQRVFPNIQMTKATKGSISPLPSYFKSRISCSLAQAETLQVVQEIIAKQLSLEQSAVI

Query:  PQTKFSELGADSLDTVEIMMALEEKFEVSIGEGGAEGISTVQDAADLIEKVKASSAS
        PQTKFS+LGADSLDTVEIMMALEEKF VSIGEGGAEGISTVQDAADLIEKVKASSAS
Subjt:  PQTKFSELGADSLDTVEIMMALEEKFEVSIGEGGAEGISTVQDAADLIEKVKASSAS

A0A5A7UWB3 Acyl carrier protein3.3e-5177.07Show/hide
Query:  MSSSFASSPLPTTLPCISSTQNRITVY----RLSTRDGSLFWGQRVFPNIQMTKATKGSISPLPSYFKSRISCSLAQAETLQVVQEIIAKQLSLEQSAVI
        MSS+FASSPLP TLPC SS +N+ T       LS +DGSLF G+RVFP+++M KA KG+ S L   FKS+I CS+AQ ETL+VVQEIIAKQLSLEQSAVI
Subjt:  MSSSFASSPLPTTLPCISSTQNRITVY----RLSTRDGSLFWGQRVFPNIQMTKATKGSISPLPSYFKSRISCSLAQAETLQVVQEIIAKQLSLEQSAVI

Query:  PQTKFSELGADSLDTVEIMMALEEKFEVSIGEGGAEGISTVQDAADLIEKVKASSAS
        PQTKFS+LGADSLDTVEIMMALEEKF VSIGEGGAEGISTVQDAADLIEKVKASSAS
Subjt:  PQTKFSELGADSLDTVEIMMALEEKFEVSIGEGGAEGISTVQDAADLIEKVKASSAS

A0A6J1HII2 Acyl carrier protein2.8e-4274.17Show/hide
Query:  SSFASSPLPTTLPCISSTQNRITVYRLSTRDGSLFWGQRVFPNIQMTKATKGSISPLPSYFKSRISCSLAQAETLQVVQEIIAKQLSLEQSAVIPQTKFS
        SS ASSPL TTL   + T +  T +R      SLF  +RVFP+I+  KA +G +  LP+YFKS ISCSLAQ ET+QVVQEIIAKQLSLEQS VIPQTKFS
Subjt:  SSFASSPLPTTLPCISSTQNRITVYRLSTRDGSLFWGQRVFPNIQMTKATKGSISPLPSYFKSRISCSLAQAETLQVVQEIIAKQLSLEQSAVIPQTKFS

Query:  ELGADSLDTVEIMMALEEKFEVSIGEGGAEGISTVQDAADLIEKVKASSAS
        ELGADSLDTVEIMMALEEKF VSIGEGGAEGISTVQDAADLIEKVK SSAS
Subjt:  ELGADSLDTVEIMMALEEKFEVSIGEGGAEGISTVQDAADLIEKVKASSAS

A0A6J1KH46 Acyl carrier protein8.8e-4474.17Show/hide
Query:  SSFASSPLPTTLPCISSTQNRITVYRLSTRDGSLFWGQRVFPNIQMTKATKGSISPLPSYFKSRISCSLAQAETLQVVQEIIAKQLSLEQSAVIPQTKFS
        SS ASSPL  TL   +ST +  T + L     SLF  +RVFP+IQM K  +G +  LP+YFKS ISCSLAQ ET+QVVQEIIAKQLSLE SAVIPQTKFS
Subjt:  SSFASSPLPTTLPCISSTQNRITVYRLSTRDGSLFWGQRVFPNIQMTKATKGSISPLPSYFKSRISCSLAQAETLQVVQEIIAKQLSLEQSAVIPQTKFS

Query:  ELGADSLDTVEIMMALEEKFEVSIGEGGAEGISTVQDAADLIEKVKASSAS
        ELGADSLDTVEIMM LEEKF VSIGEGGAEGISTVQDAADLIEKVK SSAS
Subjt:  ELGADSLDTVEIMMALEEKFEVSIGEGGAEGISTVQDAADLIEKVKASSAS

SwissProt top hitse value%identityAlignment
P52411 Acyl carrier protein 1, chloroplastic2.2e-1547.9Show/hide
Query:  STRDGSLFWGQRVFPNIQMTKATKGSISPLPSYFKSRISCSLAQAETLQVVQEIIAKQLSL-EQSAVIPQTKFSELGADSLDTVEIMMALEEKFEVSIGE
        S R  SL   ++ FP+++ +K          S F  R+SC  A+ ET+  V  I+ KQL+L + S V   +KFS LGADSLDTVEI+M LEE+F +S+ E
Subjt:  STRDGSLFWGQRVFPNIQMTKATKGSISPLPSYFKSRISCSLAQAETLQVVQEIIAKQLSL-EQSAVIPQTKFSELGADSLDTVEIMMALEEKFEVSIGE

Query:  GGAEGISTVQDAADLIEKV
          A+ I TVQDAADLIEK+
Subjt:  GGAEGISTVQDAADLIEKV

P52413 Acyl carrier protein 3, chloroplastic6.3e-1543.92Show/hide
Query:  ASSPLPTTLPCISSTQ---NRITVYR--LSTRDGSLFWGQRVFPNIQMTKATKGSISPLPSYFKSRISCSLAQAETLQVVQEIIAKQLSL-EQSAVIPQT
        A++   ++L CI S     NR  V     S R  SL    ++FP++   ++++G +S        R+ C  A+ ET+  V EI+ KQL+L E S V   +
Subjt:  ASSPLPTTLPCISSTQ---NRITVYR--LSTRDGSLFWGQRVFPNIQMTKATKGSISPLPSYFKSRISCSLAQAETLQVVQEIIAKQLSL-EQSAVIPQT

Query:  KFSELGADSLDTVEIMMALEEKFEVSIGEGGAEGISTVQDAADLIEKV
        KFS LGADSLDTVEI+M LEE+F +S+ E  A+ I TVQDAADLIEK+
Subjt:  KFSELGADSLDTVEIMMALEEKFEVSIGEGGAEGISTVQDAADLIEKV

P52414 Acyl carrier protein 4, chloroplastic2.8e-1547.9Show/hide
Query:  STRDGSLFWGQRVFPNIQMTKATKGSISPLPSYFKSRISCSLAQAETLQVVQEIIAKQLSL-EQSAVIPQTKFSELGADSLDTVEIMMALEEKFEVSIGE
        S R  SL   ++ FP++   +++KGS         +R+SC  A+ ET+  V  I+ KQL+L + S V   +KFS LGADSLDTVEI+M LEE+F +S+ E
Subjt:  STRDGSLFWGQRVFPNIQMTKATKGSISPLPSYFKSRISCSLAQAETLQVVQEIIAKQLSL-EQSAVIPQTKFSELGADSLDTVEIMMALEEKFEVSIGE

Query:  GGAEGISTVQDAADLIEKV
          A+ I TVQDAADLIEK+
Subjt:  GGAEGISTVQDAADLIEKV

P93092 Acyl carrier protein 1, chloroplastic4.8e-1551.06Show/hide
Query:  SISPLPSYFKSRISCSLAQAETLQVVQEIIAKQLSL-EQSAVIPQTKFSELGADSLDTVEIMMALEEKFEVSIGEGGAEGISTVQDAADLIEKV
        S +PL       + C  A+ ET++ V  I+ KQL+L + SAV  ++KF+ LGADSLDTVEI+M LEE+F +++ E  A+ I+TVQDAADLIEK+
Subjt:  SISPLPSYFKSRISCSLAQAETLQVVQEIIAKQLSL-EQSAVIPQTKFSELGADSLDTVEIMMALEEKFEVSIGEGGAEGISTVQDAADLIEKV

Q9SW21 Acyl carrier protein 4, chloroplastic4.8e-1550.53Show/hide
Query:  TKGSISPLPSYFKSRISCSLAQAETLQVVQEIIAKQLSLEQSA-VIPQTKFSELGADSLDTVEIMMALEEKFEVSIGEGGAEGISTVQDAADLIE
        T G  +      + +ISC+ A+AET+Q V +I+ +QL+L     +  ++KFS LGADSLDTVEI+MALEEKF +S+ E  A+ I+T+Q+AADLIE
Subjt:  TKGSISPLPSYFKSRISCSLAQAETLQVVQEIIAKQLSLEQSA-VIPQTKFSELGADSLDTVEIMMALEEKFEVSIGEGGAEGISTVQDAADLIE

Arabidopsis top hitse value%identityAlignment
AT1G54580.1 acyl carrier protein 25.1e-1250Show/hide
Query:  ISCSLAQAETLQVVQEIIAKQLSL-EQSAVIPQTKFSELGADSLDTVEIMMALEEKFEVSIGEGGAEGISTVQDAADLIEKV
        +SC+ A+ ET+  V  ++ KQLSL E   +   TKF+ LGADSLDTVEI+M LEE+F + + E  A+ I+TV+ AA LIE++
Subjt:  ISCSLAQAETLQVVQEIIAKQLSL-EQSAVIPQTKFSELGADSLDTVEIMMALEEKFEVSIGEGGAEGISTVQDAADLIEKV

AT3G05020.1 acyl carrier protein 15.5e-1451.22Show/hide
Query:  ISCSLAQAETLQVVQEIIAKQLSL-EQSAVIPQTKFSELGADSLDTVEIMMALEEKFEVSIGEGGAEGISTVQDAADLIEKV
        +SC+ A+ ET++ V  I+ KQLSL     V+ +TKF++LGADSLDTVEI+M LEE+F + + E  A+ I+TV+ AA+LIE++
Subjt:  ISCSLAQAETLQVVQEIIAKQLSL-EQSAVIPQTKFSELGADSLDTVEIMMALEEKFEVSIGEGGAEGISTVQDAADLIEKV

AT4G25050.1 acyl carrier protein 43.4e-1650.53Show/hide
Query:  TKGSISPLPSYFKSRISCSLAQAETLQVVQEIIAKQLSLEQSA-VIPQTKFSELGADSLDTVEIMMALEEKFEVSIGEGGAEGISTVQDAADLIE
        T G  +      + +ISC+ A+AET+Q V +I+ +QL+L     +  ++KFS LGADSLDTVEI+MALEEKF +S+ E  A+ I+T+Q+AADLIE
Subjt:  TKGSISPLPSYFKSRISCSLAQAETLQVVQEIIAKQLSLEQSA-VIPQTKFSELGADSLDTVEIMMALEEKFEVSIGEGGAEGISTVQDAADLIE

AT4G25050.2 acyl carrier protein 41.6e-1344.86Show/hide
Query:  TKGSISPLPSYFKSRISCSLAQAETLQVVQEIIAKQLSLEQSA-VIPQTKFSELGADSLDT------------VEIMMALEEKFEVSIGEGGAEGISTVQ
        T G  +      + +ISC+ A+AET+Q V +I+ +QL+L     +  ++KFS LGADSLDT            VEI+MALEEKF +S+ E  A+ I+T+Q
Subjt:  TKGSISPLPSYFKSRISCSLAQAETLQVVQEIIAKQLSLEQSA-VIPQTKFSELGADSLDT------------VEIMMALEEKFEVSIGEGGAEGISTVQ

Query:  DAADLIE
        +AADLIE
Subjt:  DAADLIE

AT5G27200.1 acyl carrier protein 51.4e-1454.88Show/hide
Query:  ISCSLAQAETLQVVQEIIAKQLSL-EQSAVIPQTKFSELGADSLDTVEIMMALEEKFEVSIGEGGAEGISTVQDAADLIEKV
        +SC++ Q ET++ V EI+ KQLSL +   V   TKF+ELGADSLDTVEI+M LEE+F +++ E  A+ I+TVQ AA+LIE++
Subjt:  ISCSLAQAETLQVVQEIIAKQLSL-EQSAVIPQTKFSELGADSLDTVEIMMALEEKFEVSIGEGGAEGISTVQDAADLIEKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCGTCCTTCGCTTCATCTCCTCTTCCCACGACACTTCCGTGCATCTCTTCGACACAAAATAGAATCACGGTTTACCGCCTTTCTACCCGAGATGGCAGTTTGTT
TTGGGGGCAAAGGGTGTTTCCCAACATCCAAATGACAAAGGCTACAAAAGGATCAATATCCCCACTTCCTAGCTACTTCAAATCAAGGATTTCTTGCTCCCTTGCACAAG
CAGAGACTTTGCAAGTTGTTCAAGAAATAATAGCCAAACAACTCTCTCTAGAACAAAGTGCAGTGATCCCTCAAACAAAATTTTCTGAATTGGGAGCTGATTCTCTAGAC
ACAGTTGAGATCATGATGGCTTTGGAAGAGAAGTTCGAAGTGTCGATTGGAGAAGGCGGAGCTGAGGGGATCTCGACCGTCCAAGATGCCGCCGACCTGATCGAGAAAGT
CAAGGCATCCTCTGCAAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGTCGTCCTTCGCTTCATCTCCTCTTCCCACGACACTTCCGTGCATCTCTTCGACACAAAATAGAATCACGGTTTACCGCCTTTCTACCCGAGATGGCAGTTTGTT
TTGGGGGCAAAGGGTGTTTCCCAACATCCAAATGACAAAGGCTACAAAAGGATCAATATCCCCACTTCCTAGCTACTTCAAATCAAGGATTTCTTGCTCCCTTGCACAAG
CAGAGACTTTGCAAGTTGTTCAAGAAATAATAGCCAAACAACTCTCTCTAGAACAAAGTGCAGTGATCCCTCAAACAAAATTTTCTGAATTGGGAGCTGATTCTCTAGAC
ACAGTTGAGATCATGATGGCTTTGGAAGAGAAGTTCGAAGTGTCGATTGGAGAAGGCGGAGCTGAGGGGATCTCGACCGTCCAAGATGCCGCCGACCTGATCGAGAAAGT
CAAGGCATCCTCTGCAAGTTAA
Protein sequenceShow/hide protein sequence
MSSSFASSPLPTTLPCISSTQNRITVYRLSTRDGSLFWGQRVFPNIQMTKATKGSISPLPSYFKSRISCSLAQAETLQVVQEIIAKQLSLEQSAVIPQTKFSELGADSLD
TVEIMMALEEKFEVSIGEGGAEGISTVQDAADLIEKVKASSAS