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Sed0023316 (gene) of Chayote v1 genome

Gene IDSed0023316
OrganismSechium edule (Chayote v1)
DescriptionSuccinate dehydrogenase assembly factor 4, mitochondrial
Genome locationLG05:2817085..2819424
RNA-Seq ExpressionSed0023316
SyntenySed0023316
Gene Ontology termsGO:0034553 - mitochondrial respiratory chain complex II assembly (biological process)
GO:0005739 - mitochondrion (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605777.1 Succinate dehydrogenase assembly factor 4, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]3.6e-3374.11Show/hide
Query:  MSSNLSRLFSPPPPSLTAGTAVSRLTSISLGRFFGSSANQPPSPPERGVSGEGKREAGKGSSSDQREAAGDDQDGEDEGVDLNEATGEVGGPKGPEPTRY
        MSSNL+RLFS  PPSLTA +AV+R TSIS+ R   SSANQ PS  E+GV G+ +REAGKGS  DQ EAAGDD+D EDEG D+N+ATGEVGGPKGPEPTRY
Subjt:  MSSNLSRLFSPPPPSLTAGTAVSRLTSISLGRFFGSSANQPPSPPERGVSGEGKREAGKGSSSDQREAAGDDQDGEDEGVDLNEATGEVGGPKGPEPTRY

Query:  GDWERNGRCSDF
        GDWERNGRC DF
Subjt:  GDWERNGRCSDF

KGN49871.1 hypothetical protein Csa_000062 [Cucumis sativus]6.4e-3070.54Show/hide
Query:  MSSNLSRLFSPPPPSLTAGTAVSRLTSISLGRFFGSSANQPPSPPERGVSGEGKREAGKGSSSDQREAAGDDQDGEDEGVDLNEATGEVGGPKGPEPTRY
        MSSNLSRLFS  PP+L+A  AVSRLT  SL RF  SS+NQ PS  E+GVS E +REAGKGSS ++ EAAGDD+ G+DEGVD  + T E+GGPKGPEPTRY
Subjt:  MSSNLSRLFSPPPPSLTAGTAVSRLTSISLGRFFGSSANQPPSPPERGVSGEGKREAGKGSSSDQREAAGDDQDGEDEGVDLNEATGEVGGPKGPEPTRY

Query:  GDWERNGRCSDF
        GDWER GRCSDF
Subjt:  GDWERNGRCSDF

XP_022957978.1 succinate dehydrogenase assembly factor 4, mitochondrial [Cucurbita moschata]1.6e-3375Show/hide
Query:  MSSNLSRLFSPPPPSLTAGTAVSRLTSISLGRFFGSSANQPPSPPERGVSGEGKREAGKGSSSDQREAAGDDQDGEDEGVDLNEATGEVGGPKGPEPTRY
        MSSNL+RLFS  PPSLTA +AV+R TSIS+ R   SSANQ PS  E+GV GE +REAGKGS  DQ EAAGDD+D EDEG D+N+ATGEVGGPKGPEPTRY
Subjt:  MSSNLSRLFSPPPPSLTAGTAVSRLTSISLGRFFGSSANQPPSPPERGVSGEGKREAGKGSSSDQREAAGDDQDGEDEGVDLNEATGEVGGPKGPEPTRY

Query:  GDWERNGRCSDF
        GDWERNGRC DF
Subjt:  GDWERNGRCSDF

XP_022995844.1 succinate dehydrogenase assembly factor 4, mitochondrial [Cucurbita maxima]3.6e-3374.11Show/hide
Query:  MSSNLSRLFSPPPPSLTAGTAVSRLTSISLGRFFGSSANQPPSPPERGVSGEGKREAGKGSSSDQREAAGDDQDGEDEGVDLNEATGEVGGPKGPEPTRY
        MSSNL+RLFS  PPSLTA +AV+R+TS S+ R   SSANQ PS  E+GV GE +REAGKGS  DQ EAAGDD+D EDEG D+N+ATGEVGGPKGPEPTRY
Subjt:  MSSNLSRLFSPPPPSLTAGTAVSRLTSISLGRFFGSSANQPPSPPERGVSGEGKREAGKGSSSDQREAAGDDQDGEDEGVDLNEATGEVGGPKGPEPTRY

Query:  GDWERNGRCSDF
        GDWERNGRC DF
Subjt:  GDWERNGRCSDF

XP_023532848.1 succinate dehydrogenase assembly factor 4, mitochondrial [Cucurbita pepo subsp. pepo]3.6e-3374.11Show/hide
Query:  MSSNLSRLFSPPPPSLTAGTAVSRLTSISLGRFFGSSANQPPSPPERGVSGEGKREAGKGSSSDQREAAGDDQDGEDEGVDLNEATGEVGGPKGPEPTRY
        MSSNL+RLFS  PPSLT+ +AV+R TSIS+ R   SSANQ PS  E+GV GE +REAGKGS  DQ EAAGDD+D EDEG D+N+ATGEVGGPKGPEPTRY
Subjt:  MSSNLSRLFSPPPPSLTAGTAVSRLTSISLGRFFGSSANQPPSPPERGVSGEGKREAGKGSSSDQREAAGDDQDGEDEGVDLNEATGEVGGPKGPEPTRY

Query:  GDWERNGRCSDF
        GDWERNGRC DF
Subjt:  GDWERNGRCSDF

TrEMBL top hitse value%identityAlignment
A0A0A0KQ66 Succinate dehydrogenase assembly factor 4, mitochondrial3.1e-3070.54Show/hide
Query:  MSSNLSRLFSPPPPSLTAGTAVSRLTSISLGRFFGSSANQPPSPPERGVSGEGKREAGKGSSSDQREAAGDDQDGEDEGVDLNEATGEVGGPKGPEPTRY
        MSSNLSRLFS  PP+L+A  AVSRLT  SL RF  SS+NQ PS  E+GVS E +REAGKGSS ++ EAAGDD+ G+DEGVD  + T E+GGPKGPEPTRY
Subjt:  MSSNLSRLFSPPPPSLTAGTAVSRLTSISLGRFFGSSANQPPSPPERGVSGEGKREAGKGSSSDQREAAGDDQDGEDEGVDLNEATGEVGGPKGPEPTRY

Query:  GDWERNGRCSDF
        GDWER GRCSDF
Subjt:  GDWERNGRCSDF

A0A5A7TMD3 Succinate dehydrogenase assembly factor 4, mitochondrial2.1e-2665.18Show/hide
Query:  MSSNLSRLFSPPPPSLTAGTAVSRLTSISLGRFFGSSANQPPSPPERGVSGEGKREAGKGSSSDQREAAGDDQDGEDEGVDLNEATGEVGGPKGPEPTRY
        MSS+LSRLFS  PP+L+A   V RLTS SL RF  SS+NQ PS  E+GVS E +REA KGSS +Q EAAGDD+  +D+GVD  +   E+GGPKG EPTRY
Subjt:  MSSNLSRLFSPPPPSLTAGTAVSRLTSISLGRFFGSSANQPPSPPERGVSGEGKREAGKGSSSDQREAAGDDQDGEDEGVDLNEATGEVGGPKGPEPTRY

Query:  GDWERNGRCSDF
        GDWERNGRC DF
Subjt:  GDWERNGRCSDF

A0A6J1H1T7 Succinate dehydrogenase assembly factor 4, mitochondrial7.9e-3475Show/hide
Query:  MSSNLSRLFSPPPPSLTAGTAVSRLTSISLGRFFGSSANQPPSPPERGVSGEGKREAGKGSSSDQREAAGDDQDGEDEGVDLNEATGEVGGPKGPEPTRY
        MSSNL+RLFS  PPSLTA +AV+R TSIS+ R   SSANQ PS  E+GV GE +REAGKGS  DQ EAAGDD+D EDEG D+N+ATGEVGGPKGPEPTRY
Subjt:  MSSNLSRLFSPPPPSLTAGTAVSRLTSISLGRFFGSSANQPPSPPERGVSGEGKREAGKGSSSDQREAAGDDQDGEDEGVDLNEATGEVGGPKGPEPTRY

Query:  GDWERNGRCSDF
        GDWERNGRC DF
Subjt:  GDWERNGRCSDF

A0A6J1K722 Succinate dehydrogenase assembly factor 4, mitochondrial1.8e-3374.11Show/hide
Query:  MSSNLSRLFSPPPPSLTAGTAVSRLTSISLGRFFGSSANQPPSPPERGVSGEGKREAGKGSSSDQREAAGDDQDGEDEGVDLNEATGEVGGPKGPEPTRY
        MSSNL+RLFS  PPSLTA +AV+R+TS S+ R   SSANQ PS  E+GV GE +REAGKGS  DQ EAAGDD+D EDEG D+N+ATGEVGGPKGPEPTRY
Subjt:  MSSNLSRLFSPPPPSLTAGTAVSRLTSISLGRFFGSSANQPPSPPERGVSGEGKREAGKGSSSDQREAAGDDQDGEDEGVDLNEATGEVGGPKGPEPTRY

Query:  GDWERNGRCSDF
        GDWERNGRC DF
Subjt:  GDWERNGRCSDF

C5Z4E8 Succinate dehydrogenase assembly factor 4, mitochondrial2.0e-1345.61Show/hide
Query:  MSSNLSRLFSPPPPSLTAGTAVSRLTSISLGRFFGSSANQPP--SPPERGVSGEGKREAGKGSSSDQREAAGDDQDGEDEGVDLNEATGEVGGPKGPEPT
        ++S +S +  PPP         S L  ++L     S+   PP  +PPE    GEG+ EA +   +D    AG ++D +D GV +N+ATGE+GGP+GPEPT
Subjt:  MSSNLSRLFSPPPPSLTAGTAVSRLTSISLGRFFGSSANQPP--SPPERGVSGEGKREAGKGSSSDQREAAGDDQDGEDEGVDLNEATGEVGGPKGPEPT

Query:  RYGDWERNGRCSDF
        RYGDWER GRCSDF
Subjt:  RYGDWERNGRCSDF

SwissProt top hitse value%identityAlignment
Q54Y25 Succinate dehydrogenase assembly factor 4, mitochondrial9.3e-0877.42Show/hide
Query:  LNEATGEVGGPKGPEPTRYGDWERNGRCSDF
        +N  T E+GGPKGPEPTRY DWERNGR SDF
Subjt:  LNEATGEVGGPKGPEPTRYGDWERNGRCSDF

Q5VUM1 Succinate dehydrogenase assembly factor 4, mitochondrial4.3e-0545.33Show/hide
Query:  SPPERGVSGEGKREAGKGSSSDQREAAGDDQDGEDEGV-----DLNEATGEVGGPKGPEPTRYGDWERNGRCSDF
        S  + G S   K+   K    + R  A +D   E E +     D+N  T E GGP+GPEPTRYGDWER GRC DF
Subjt:  SPPERGVSGEGKREAGKGSSSDQREAAGDDQDGEDEGV-----DLNEATGEVGGPKGPEPTRYGDWERNGRCSDF

Q8BTE0 Succinate dehydrogenase assembly factor 4, mitochondrial6.7e-0647.89Show/hide
Query:  EGKREAGKGSSSDQREAAG-----DDQDGEDEGV-----DLNEATGEVGGPKGPEPTRYGDWERNGRCSDF
        EGK E  K +    +   G     +D   E E +     D+N  T E GGPKGPEPTRYGDWER GRC DF
Subjt:  EGKREAGKGSSSDQREAAG-----DDQDGEDEGV-----DLNEATGEVGGPKGPEPTRYGDWERNGRCSDF

Q9VLU6 Succinate dehydrogenase assembly factor 4, mitochondrial1.6e-0780Show/hide
Query:  NEATGEVGGPKGPEPTRYGDWERNGRCSDF
        N  TGE+GGP GPEPTRYGDWER GR SDF
Subjt:  NEATGEVGGPKGPEPTRYGDWERNGRCSDF

Arabidopsis top hitse value%identityAlignment
AT5G67490.1 unknown protein6.0e-1035.4Show/hide
Query:  SSNLSRLFSPPPPSLTAGTAVSRLTSISLGRFFGSSANQPPS--PPERGVSGEGKREAGKGSSSDQREAAGDDQDGEDEGVDLNEATGEVGGPKGPEPTR
        ++N+ RL +P         +VS      + RF  S    PP    P + ++ + K +     +   ++   ++ +G   G  +NE TGE+GGP+GPEPTR
Subjt:  SSNLSRLFSPPPPSLTAGTAVSRLTSISLGRFFGSSANQPPS--PPERGVSGEGKREAGKGSSSDQREAAGDDQDGEDEGVDLNEATGEVGGPKGPEPTR

Query:  YGDWERNGRCSDF
        YGDWE+ GRCSDF
Subjt:  YGDWERNGRCSDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAGCAATCTCAGCCGTCTATTCTCGCCGCCGCCGCCAAGTCTCACCGCCGGAACGGCGGTGAGTCGTCTCACTTCCATCTCGTTAGGCCGATTCTTTGGCTCCTC
AGCGAATCAGCCACCTTCTCCACCGGAGCGAGGAGTTTCCGGCGAGGGGAAACGAGAGGCTGGAAAAGGAAGCTCGTCGGATCAACGCGAGGCTGCCGGAGATGATCAAG
ACGGTGAAGATGAAGGAGTTGATCTGAATGAAGCTACTGGTGAGGTCGGTGGACCTAAAGGCCCTGAGCCTACTCGCTACGGTGATTGGGAACGGAACGGTCGGTGCTCC
GATTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAGCAATCTCAGCCGTCTATTCTCGCCGCCGCCGCCAAGTCTCACCGCCGGAACGGCGGTGAGTCGTCTCACTTCCATCTCGTTAGGCCGATTCTTTGGCTCCTC
AGCGAATCAGCCACCTTCTCCACCGGAGCGAGGAGTTTCCGGCGAGGGGAAACGAGAGGCTGGAAAAGGAAGCTCGTCGGATCAACGCGAGGCTGCCGGAGATGATCAAG
ACGGTGAAGATGAAGGAGTTGATCTGAATGAAGCTACTGGTGAGGTCGGTGGACCTAAAGGCCCTGAGCCTACTCGCTACGGTGATTGGGAACGGAACGGTCGGTGCTCC
GATTTTTGACGTTTCGAGGAGGGAGATCAGTTTATTAGGATGGTTCGAATCTGGTTGAATTCTTCTTATGATTTTTGACATTTCGAGGAAAAGGCATTGTAAAATGGGAA
TTTGTCTGCTTTGGTTGGTTTTGAGATAGGAGCAAGTTGTAAGATGGAAAATGACTACCAGATAGCTGAGTTGAGACTTAAGTGCTTGGTTGGGTTTTTTTTTTCCAGAA
TAGTAGCAACAATAATAGAACCATTTGTTTGTATTTGGTAGTAATTTTAACCACTCACTTAACTACTATATTAATACCCATATCTAAATATTTCGTTTTAAAAATAA
Protein sequenceShow/hide protein sequence
MSSNLSRLFSPPPPSLTAGTAVSRLTSISLGRFFGSSANQPPSPPERGVSGEGKREAGKGSSSDQREAAGDDQDGEDEGVDLNEATGEVGGPKGPEPTRYGDWERNGRCS
DF