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Sed0023357 (gene) of Chayote v1 genome

Gene IDSed0023357
OrganismSechium edule (Chayote v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationLG05:35254975..35255240
RNA-Seq ExpressionSed0023357
SyntenySed0023357
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572089.1 Auxin-responsive protein SAUR23, partial [Cucurbita argyrosperma subsp. sororia]1.3e-2977.53Show/hide
Query:  MRLLQLLRRPSNSTK-GVAGVPKGYC----------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLISLLNRP
        MRLLQLLRRPS STK GV  VPKGYC          RFVIP+TYLNQPCFQDLLSQ E+EFGYYHPMGGLTIQCREDIF +LIS LNRP
Subjt:  MRLLQLLRRPSNSTK-GVAGVPKGYC----------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLISLLNRP

KGN43209.1 hypothetical protein Csa_020258 [Cucumis sativus]2.4e-2877.53Show/hide
Query:  MRLLQLLRRPSNSTK-GVAGVPKGYC----------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLISLLNRP
        MR+LQLLRR S STK GVA VPKGYC          RFVIPITYLNQPCFQ LLSQ EEEFGYYHPMGGLTIQCREDIF +LIS LNRP
Subjt:  MRLLQLLRRPSNSTK-GVAGVPKGYC----------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLISLLNRP

XP_011658582.1 auxin-responsive protein SAUR24 [Cucumis sativus]1.1e-2060.47Show/hide
Query:  MRLLQLLRRPSNSTKGVAGVPKGYC----------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLISLLN
        MRL+ LL+R    ++GV+ +PKGYC          RF+IPI+YLNQPCFQ+LLSQ EEEFGY+HPMGGLTI C++ IF +LIS LN
Subjt:  MRLLQLLRRPSNSTKGVAGVPKGYC----------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLISLLN

XP_016900447.1 PREDICTED: auxin-induced protein 15A-like [Cucumis melo]1.7e-2673.86Show/hide
Query:  MRLLQLLRRPSNSTKGVAGVPKGYC----------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLISLLNRP
        MR+LQLLRR S   +GVA VPKGYC          RFVIP+TYLNQPCFQ LLSQ EEEFGYYHPMGGLTIQCREDIF +LIS LNRP
Subjt:  MRLLQLLRRPSNSTKGVAGVPKGYC----------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLISLLNRP

XP_022136192.1 auxin-responsive protein SAUR24-like [Momordica charantia]5.8e-2266.28Show/hide
Query:  MRLLQLLRRPSNSTKGVAGVPKGYC----------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLISLLN
        M L QLL+R     +GV+ VPKGYC          RFVIPI+YLNQPCFQ+LL Q EEEFGYYHPMGGLTI CR+DIF DLIS LN
Subjt:  MRLLQLLRRPSNSTKGVAGVPKGYC----------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLISLLN

TrEMBL top hitse value%identityAlignment
A0A0A0K2F9 Uncharacterized protein1.2e-2877.53Show/hide
Query:  MRLLQLLRRPSNSTK-GVAGVPKGYC----------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLISLLNRP
        MR+LQLLRR S STK GVA VPKGYC          RFVIPITYLNQPCFQ LLSQ EEEFGYYHPMGGLTIQCREDIF +LIS LNRP
Subjt:  MRLLQLLRRPSNSTK-GVAGVPKGYC----------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLISLLNRP

A0A0A0K4K1 Uncharacterized protein6.3e-2265.12Show/hide
Query:  MRLLQLLRRPSNSTKGVAGVPKGYC----------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLISLLN
        MRL  LL+R     +GV+ VPKGYC          RFVIPITYLN+PCFQ LL Q EEEFGYYHPMGGLTI CR+DIF DLIS +N
Subjt:  MRLLQLLRRPSNSTKGVAGVPKGYC----------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLISLLN

A0A1S4DWU0 auxin-induced protein 15A-like8.5e-2773.86Show/hide
Query:  MRLLQLLRRPSNSTKGVAGVPKGYC----------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLISLLNRP
        MR+LQLLRR S   +GVA VPKGYC          RFVIP+TYLNQPCFQ LLSQ EEEFGYYHPMGGLTIQCREDIF +LIS LNRP
Subjt:  MRLLQLLRRPSNSTKGVAGVPKGYC----------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLISLLNRP

A0A5D3CL76 Auxin-induced protein 15A-like8.5e-2773.86Show/hide
Query:  MRLLQLLRRPSNSTKGVAGVPKGYC----------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLISLLNRP
        MR+LQLLRR S   +GVA VPKGYC          RFVIP+TYLNQPCFQ LLSQ EEEFGYYHPMGGLTIQCREDIF +LIS LNRP
Subjt:  MRLLQLLRRPSNSTKGVAGVPKGYC----------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLISLLNRP

A0A6J1C4W2 auxin-responsive protein SAUR24-like2.8e-2266.28Show/hide
Query:  MRLLQLLRRPSNSTKGVAGVPKGYC----------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLISLLN
        M L QLL+R     +GV+ VPKGYC          RFVIPI+YLNQPCFQ+LL Q EEEFGYYHPMGGLTI CR+DIF DLIS LN
Subjt:  MRLLQLLRRPSNSTKGVAGVPKGYC----------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLISLLN

SwissProt top hitse value%identityAlignment
P32295 Indole-3-acetic acid-induced protein ARG71.7e-1654.67Show/hide
Query:  SNSTKGVAGVPKGYC---------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLISLLN
        + ++  V   PKGY          RFVIP+++LNQP FQDLLSQ EEEFGY HPMGGLTI C ED+F  + S L+
Subjt:  SNSTKGVAGVPKGYC---------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLISLLN

P33079 Auxin-induced protein 10A51.7e-1650Show/hide
Query:  RLLQLLRRPSNSTKGVAG----VPKGYC---------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLISLLN
        R+  ++RR S  T   A     VPKGY          RF IP++YLN+P FQ+LLSQ EEEFGY HPMGGLTI C+E+ F ++ + LN
Subjt:  RLLQLLRRPSNSTKGVAG----VPKGYC---------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLISLLN

P33080 Auxin-induced protein X10A7.6e-1760.27Show/hide
Query:  STKGVAGVPKGYC---------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLISLLN
        S+K V  VPKGY          RF+IP++YLNQP FQDLL+Q EEEFGY HPMGGLTI C+ED F  + S LN
Subjt:  STKGVAGVPKGYC---------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLISLLN

P33081 Auxin-induced protein 15A2.6e-1763.24Show/hide
Query:  AGVPKGYC---------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLISLLN
        A  PKGY          RFVIP++YLNQP FQDLLSQ EEEFGY HPMGGLTI C ED+F  + S LN
Subjt:  AGVPKGYC---------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLISLLN

P33083 Auxin-induced protein 6B2.2e-1658.9Show/hide
Query:  STKGVAGVPKGYC---------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLISLLN
        S+K V  V KGY          RFVIP++YLN+P FQDLLSQ EEEFGY+HP GGLTI C ED+F  + S LN
Subjt:  STKGVAGVPKGYC---------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLISLLN

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family3.2e-1853.01Show/hide
Query:  QLLRRPSNSTKGVAGVPKGYC-----------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLISLLN
        QLL+  S+S+  VA +PKG+            RFV+P+TYL+ PCFQ LL + EEEFG+ HPMGGLTI C E IF DL S L+
Subjt:  QLLRRPSNSTKGVAGVPKGYC-----------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLISLLN

AT4G34810.1 SAUR-like auxin-responsive protein family1.7e-1645.35Show/hide
Query:  MRLLQLLRRPSNSTKGVAGVPKGYC-------------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLIS
        ++L  L  R   S+     VPKG+              RFV+PI++LN P F++ LS+ EEEFG+ HPMGGLTI CRE++F DLI+
Subjt:  MRLLQLLRRPSNSTKGVAGVPKGYC-------------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLIS

AT4G38840.1 SAUR-like auxin-responsive protein family5.4e-1851.16Show/hide
Query:  QLLRR----PSNSTKGVAGVPKGYC----------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLISLLN
        Q+LR+     S+S+     VPKGY           RFV+P++YL+QP FQDLL + EEEFG+ HPMGGLTI C E+IF DL S  N
Subjt:  QLLRR----PSNSTKGVAGVPKGYC----------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLISLLN

AT4G38850.1 SAUR-like auxin-responsive protein family1.3e-1654.67Show/hide
Query:  QLLRRPSNST-KGVAGVPKG-----YCRFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLIS
        Q++RR S+ST +G   V  G       R+V+P++YLNQP FQ LLS+ EEEFGY HPMGGLTI C E +FF + S
Subjt:  QLLRRPSNST-KGVAGVPKG-----YCRFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLIS

AT5G18020.1 SAUR-like auxin-responsive protein family5.1e-1649.35Show/hide
Query:  SNSTKGVAGVPKGYC----------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLISLLNR
        S ST   +  PKG+           R+++PI+YLNQP FQ LLS+ EEEFG+ HPMGGLTI C ED F ++ S   R
Subjt:  SNSTKGVAGVPKGYC----------RFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLISLLNR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACTTCTTCAGCTTCTCCGACGACCTTCCAACTCAACGAAAGGCGTTGCAGGAGTTCCGAAGGGCTATTGTCGTTTTGTTATCCCGATAACTTACTTGAACCAACC
GTGTTTTCAAGACTTGCTAAGTCAAGTTGAAGAAGAATTTGGTTACTATCATCCCATGGGTGGTCTTACCATTCAATGCCGAGAAGACATCTTCTTCGATCTCATTTCTC
TGTTAAATAGGCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGACTTCTTCAGCTTCTCCGACGACCTTCCAACTCAACGAAAGGCGTTGCAGGAGTTCCGAAGGGCTATTGTCGTTTTGTTATCCCGATAACTTACTTGAACCAACC
GTGTTTTCAAGACTTGCTAAGTCAAGTTGAAGAAGAATTTGGTTACTATCATCCCATGGGTGGTCTTACCATTCAATGCCGAGAAGACATCTTCTTCGATCTCATTTCTC
TGTTAAATAGGCCATGA
Protein sequenceShow/hide protein sequence
MRLLQLLRRPSNSTKGVAGVPKGYCRFVIPITYLNQPCFQDLLSQVEEEFGYYHPMGGLTIQCREDIFFDLISLLNRP