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Sed0023372 (gene) of Chayote v1 genome

Gene IDSed0023372
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG13:2956772..2957186
RNA-Seq ExpressionSed0023372
SyntenySed0023372
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044340.1 putative beta-D-xylosidase 5 isoform X2 [Cucumis melo var. makuwa]2.8e-2361.95Show/hide
Query:  MEGLIPYIVHAFKKQKPRHNYRSQSMGSSRSYHLL---NDESSHRRTQSNFQPSTFEFWD-QRSAHEFTQSRSVSK---------------GFGSYPGQV
        MEGLIPY+ HA KKQKPRH+YRSQS+GSSRSYHLL   NDESSHRRT+S++QP TFEF D QR + E T SRSV+K                F SY GQV
Subjt:  MEGLIPYIVHAFKKQKPRHNYRSQSMGSSRSYHLL---NDESSHRRTQSNFQPSTFEFWD-QRSAHEFTQSRSVSK---------------GFGSYPGQV

Query:  SNIATY-YGNVPR
        SN   Y YGN PR
Subjt:  SNIATY-YGNVPR

KAG6576920.1 hypothetical protein SDJN03_24494, partial [Cucurbita argyrosperma subsp. sororia]1.0e-2573.96Show/hide
Query:  MEGLIPYIVHAFKKQKPRHNYRSQSMGSSRSYHLL-NDESSHRRTQSNFQPSTFEFWDQRSAHEFTQSRSVSKG-FG-SYPGQVSNIATYYGNVPR
        MEGLIPY+ HA KKQKPRH+YRSQS+GSSRSYHLL NDESSHRRT+S+FQP  FE+ DQRS HE   SRSVSKG FG SY GQVSN     GN+PR
Subjt:  MEGLIPYIVHAFKKQKPRHNYRSQSMGSSRSYHLL-NDESSHRRTQSNFQPSTFEFWDQRSAHEFTQSRSVSKG-FG-SYPGQVSNIATYYGNVPR

KAG7014945.1 NADH-ubiquinone oxidoreductase chain 4L, partial [Cucurbita argyrosperma subsp. argyrosperma]8.8e-2577.91Show/hide
Query:  MEGLIPYIVHAFKKQKPRHNYRSQSMGSSRSYHLL-NDESSHRRTQSNFQPSTFEFWDQRSAHEFTQSRSVSKG-FG-SYPGQVSN
        MEGLIPY+ HA KKQKPRH+YRSQS+GSSRSYHLL NDESSHRRT+S+FQP  FE+ DQRS HE   SRSVSKG FG SY GQVSN
Subjt:  MEGLIPYIVHAFKKQKPRHNYRSQSMGSSRSYHLL-NDESSHRRTQSNFQPSTFEFWDQRSAHEFTQSRSVSKG-FG-SYPGQVSN

KGN52765.1 hypothetical protein Csa_015267 [Cucumis sativus]3.3e-2462.5Show/hide
Query:  MEGLIPYIVHAFKKQKPRHNYRSQSMGSSRSYHLL---NDESSHRRTQSNFQPSTFEFWDQRSAHEFTQSRSVSK---------------GFGSYPGQVS
        MEGLIPY+ HA KKQKPRH+YRSQS+GSSRSYHLL   NDESSHRRT+S++QP TFEF DQRS  E T SRSV+K                F SY GQVS
Subjt:  MEGLIPYIVHAFKKQKPRHNYRSQSMGSSRSYHLL---NDESSHRRTQSNFQPSTFEFWDQRSAHEFTQSRSVSK---------------GFGSYPGQVS

Query:  NIATY-YGNVPR
        N   Y YGN  R
Subjt:  NIATY-YGNVPR

XP_038905929.1 uncharacterized protein LOC120091851 [Benincasa hispida]2.9e-2866.97Show/hide
Query:  MEGLIPYIVHAFKKQKPRHNYRSQSMGSSRSYHLL--NDESSHRRTQSNFQPSTFEFWDQRSAHEFTQSRSVSK---------------GFGSYPGQVSN
        MEGLIPY+ HA KKQKPRHNYRSQS+GSSRSYHLL  NDESSHRRT+S+FQP   EF DQRS HE   SRSVSK               GF SYPGQV+N
Subjt:  MEGLIPYIVHAFKKQKPRHNYRSQSMGSSRSYHLL--NDESSHRRTQSNFQPSTFEFWDQRSAHEFTQSRSVSK---------------GFGSYPGQVSN

Query:  IATYYGNVP
          TYYGN P
Subjt:  IATYYGNVP

TrEMBL top hitse value%identityAlignment
A0A0A0KT06 Uncharacterized protein1.6e-2462.5Show/hide
Query:  MEGLIPYIVHAFKKQKPRHNYRSQSMGSSRSYHLL---NDESSHRRTQSNFQPSTFEFWDQRSAHEFTQSRSVSK---------------GFGSYPGQVS
        MEGLIPY+ HA KKQKPRH+YRSQS+GSSRSYHLL   NDESSHRRT+S++QP TFEF DQRS  E T SRSV+K                F SY GQVS
Subjt:  MEGLIPYIVHAFKKQKPRHNYRSQSMGSSRSYHLL---NDESSHRRTQSNFQPSTFEFWDQRSAHEFTQSRSVSK---------------GFGSYPGQVS

Query:  NIATY-YGNVPR
        N   Y YGN  R
Subjt:  NIATY-YGNVPR

A0A2N9EKL5 Uncharacterized protein1.8e-1554.08Show/hide
Query:  MEGLIPYIVHAFKKQKPRHNYRSQSMGSSRSYHLLN-----DESSHRRTQSNFQPSTFEFWDQRSAHEFTQSRSVSKG------------FGSYPGQV
        MEGLIP+++HA KKQ+P+++YR  S GSSRSYHLLN       SSHRRT+S FQP T EF  QRS HE+ +S SV+K              GSYP QV
Subjt:  MEGLIPYIVHAFKKQKPRHNYRSQSMGSSRSYHLLN-----DESSHRRTQSNFQPSTFEFWDQRSAHEFTQSRSVSKG------------FGSYPGQV

A0A5A7TM95 Putative beta-D-xylosidase 5 isoform X21.4e-2361.95Show/hide
Query:  MEGLIPYIVHAFKKQKPRHNYRSQSMGSSRSYHLL---NDESSHRRTQSNFQPSTFEFWD-QRSAHEFTQSRSVSK---------------GFGSYPGQV
        MEGLIPY+ HA KKQKPRH+YRSQS+GSSRSYHLL   NDESSHRRT+S++QP TFEF D QR + E T SRSV+K                F SY GQV
Subjt:  MEGLIPYIVHAFKKQKPRHNYRSQSMGSSRSYHLL---NDESSHRRTQSNFQPSTFEFWD-QRSAHEFTQSRSVSK---------------GFGSYPGQV

Query:  SNIATY-YGNVPR
        SN   Y YGN PR
Subjt:  SNIATY-YGNVPR

A0A5C7I5L1 Uncharacterized protein3.0e-1549.12Show/hide
Query:  MEGLIPYIVHAFKKQKPRHNYRSQSMGSSRSYHLLN-----DESSHRRTQSNFQP--STFEFWDQRSAHEFTQSRSVSK---------------GFGSYP
        MEGLIP+++HA KKQ+P+H+YRS S+GS+RSYHLLN     D SSHRRT+S+FQP  ST +F  QRS  EF +SR+V++                 GS+P
Subjt:  MEGLIPYIVHAFKKQKPRHNYRSQSMGSSRSYHLLN-----DESSHRRTQSNFQP--STFEFWDQRSAHEFTQSRSVSK---------------GFGSYP

Query:  --GQVSNIATYYGN
            VSN A ++ N
Subjt:  --GQVSNIATYYGN

A0A6P6AFC0 uncharacterized protein LOC1113090192.1e-1653.06Show/hide
Query:  MEGLIPYIVHAFKKQKPRHNYRSQSMGSSRSYHLLNDE--------SSHRRTQSNFQPSTFEFWDQRSAHEFTQSRSVSKGFG-SYPGQV--SNIATY
        MEGLIPY++ A +KQKP H YRS SMGSSRSYHLL  +        SSHRRT+S+FQP T EF++QRS  +F  ++S + G   +YP +V  SN+ +Y
Subjt:  MEGLIPYIVHAFKKQKPRHNYRSQSMGSSRSYHLLNDE--------SSHRRTQSNFQPSTFEFWDQRSAHEFTQSRSVSKGFG-SYPGQV--SNIATY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G19615.1 unknown protein4.7e-0847.13Show/hide
Query:  MEGLIPYIVHAFKK-QKPRH-NYRSQSMGSSRSYHLL---------NDESSHRRTQSNFQPST-FEFWDQRSA---HEFTQSRSVSK
        MEGLIPY++HA KK  KP H  YRS S+GSSRSY  L            SSHRRT+S++ P    + +DQRS+    EF    S S+
Subjt:  MEGLIPYIVHAFKK-QKPRH-NYRSQSMGSSRSYHLL---------NDESSHRRTQSNFQPST-FEFWDQRSA---HEFTQSRSVSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGCTTAATTCCATATATTGTCCATGCATTCAAGAAGCAAAAGCCACGCCACAACTATAGAAGCCAATCCATGGGTTCAAGCAGGAGCTATCATCTTCTCAATGA
TGAGTCGTCTCACCGACGAACGCAGTCGAATTTTCAGCCATCGACGTTCGAGTTTTGGGACCAGCGATCGGCTCACGAGTTCACGCAGTCCCGCAGTGTTAGCAAAGGCT
TTGGATCATATCCTGGCCAGGTTTCAAATATTGCTACTTATTATGGTAATGTTCCCCGTTGA
mRNA sequenceShow/hide mRNA sequence
GTTTTGTGATCCAAGTCTTGAAAGAAGAATAAAAAAAATGGAGGGCTTAATTCCATATATTGTCCATGCATTCAAGAAGCAAAAGCCACGCCACAACTATAGAAGCCAAT
CCATGGGTTCAAGCAGGAGCTATCATCTTCTCAATGATGAGTCGTCTCACCGACGAACGCAGTCGAATTTTCAGCCATCGACGTTCGAGTTTTGGGACCAGCGATCGGCT
CACGAGTTCACGCAGTCCCGCAGTGTTAGCAAAGGCTTTGGATCATATCCTGGCCAGGTTTCAAATATTGCTACTTATTATGGTAATGTTCCCCGTTGATAAAATGGCAA
AGTGAAAAGATTTGAAGATCAATTTGTGATGTTGTTCTTATTTATTTATTTATTTTCTGTAAATTTGTTTGATTTTATTGGTGGT
Protein sequenceShow/hide protein sequence
MEGLIPYIVHAFKKQKPRHNYRSQSMGSSRSYHLLNDESSHRRTQSNFQPSTFEFWDQRSAHEFTQSRSVSKGFGSYPGQVSNIATYYGNVPR